RNA–Protein interactions for RNA: ENST00000528866.1

AP003461.1-201, humanhuman

BASIC

Gene AP003461.1, Length 78 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003461.1-201ENST00000528866 AEBP2Q6ZN18 517 aaPredicted RBP26.27■■□□□ 1.8
AP003461.1-201ENST00000528866 CHIC1Q5VXU3 224 aa25.34■■□□□ 1.65
AP003461.1-201ENST00000528866 SENP3Q9H4L4 574 aaPredicted RBP22.41■■□□□ 1.18
AP003461.1-201ENST00000528866 PHF23Q9BUL5 403 aaPredicted RBP22.22■■□□□ 1.15
AP003461.1-201ENST00000528866 FOXD1Q16676 465 aa20.81■□□□□ 0.92
AP003461.1-201ENST00000528866 PLPPR3Q6T4P5 718 aa20.46■□□□□ 0.87
AP003461.1-201ENST00000528866 ADRA2BP18089 450 aa19.74■□□□□ 0.75
AP003461.1-201ENST00000528866 PPP6R1Q9UPN7 881 aa19.74■□□□□ 0.75
AP003461.1-201ENST00000528866 PIAS4Q8N2W9 510 aaPredicted RBP19.61■□□□□ 0.73
AP003461.1-201ENST00000528866 MSH5O43196 834 aa19.37■□□□□ 0.69
AP003461.1-201ENST00000528866 POTEDQ86YR6 584 aa18.23■□□□□ 0.51
AP003461.1-201ENST00000528866 SCAF1Q9H7N4 1312 aaKnown RBP18.11■□□□□ 0.49
AP003461.1-201ENST00000528866 MAPK8IP2Q13387 824 aaPredicted RBP18.01■□□□□ 0.47
AP003461.1-201ENST00000528866 PPP4R3CPQ6ZMV5 832 aa17.98■□□□□ 0.47
AP003461.1-201ENST00000528866 DMRT2Q9Y5R5 561 aa17.8■□□□□ 0.44
AP003461.1-201ENST00000528866 CNKSR2Q8WXI2 1034 aa17.55■□□□□ 0.4
AP003461.1-201ENST00000528866 NCBP3Q53F19 620 aaKnown RBP17.45■□□□□ 0.38
AP003461.1-201ENST00000528866 RNF216Q9NWF9 866 aaPredicted RBP17.28■□□□□ 0.36
AP003461.1-201ENST00000528866 HOXD11P31277 338 aaPredicted RBP17.27■□□□□ 0.36
AP003461.1-201ENST00000528866 DCAF8L1A6NGE4 600 aa17.2■□□□□ 0.34
AP003461.1-201ENST00000528866 KCNA4P22459 653 aa17.16■□□□□ 0.34
AP003461.1-201ENST00000528866 NPM3O75607 178 aaKnown RBP17.13■□□□□ 0.33
AP003461.1-201ENST00000528866 DNAJC5BQ9UF47 199 aa16.58■□□□□ 0.24
AP003461.1-201ENST00000528866 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.57■□□□□ 0.24
AP003461.1-201ENST00000528866 RNF39Q9H2S5 420 aa16.53■□□□□ 0.24
AP003461.1-201ENST00000528866 CACNB1Q02641 598 aaPredicted RBP16.44■□□□□ 0.22
AP003461.1-201ENST00000528866 C1QBPQ07021 282 aaKnown RBP16.33■□□□□ 0.2
AP003461.1-201ENST00000528866 SLC4A1APQ9BWU0 796 aaKnown RBP16.32■□□□□ 0.2
AP003461.1-201ENST00000528866 SLC4A2P04920 1241 aa16.23■□□□□ 0.19
AP003461.1-201ENST00000528866 U3KPZ7 1027 aaPredicted RBP16.18■□□□□ 0.18
AP003461.1-201ENST00000528866 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.92■□□□□ 0.14
AP003461.1-201ENST00000528866 HNRNPUL2Q1KMD3 747 aaKnown RBP15.92■□□□□ 0.14
AP003461.1-201ENST00000528866 FOXD4L1Q9NU39 408 aa15.91■□□□□ 0.14
AP003461.1-201ENST00000528866 CAPN15O75808 1086 aa15.88■□□□□ 0.13
AP003461.1-201ENST00000528866 MYCNP04198 464 aaPredicted RBP15.87■□□□□ 0.13
AP003461.1-201ENST00000528866 APLP2Q06481 763 aa15.86■□□□□ 0.13
AP003461.1-201ENST00000528866 SPINK5Q9NQ38 1064 aaPredicted RBP15.86■□□□□ 0.13
AP003461.1-201ENST00000528866 SAMD1Q6SPF0 538 aaPredicted RBP15.83■□□□□ 0.12
AP003461.1-201ENST00000528866 ZBTB22O15209 634 aa15.74■□□□□ 0.11
AP003461.1-201ENST00000528866 TRHP20396 242 aaPredicted RBP15.72■□□□□ 0.11
AP003461.1-201ENST00000528866 ZNF219Q9P2Y4 722 aaPredicted RBP15.67■□□□□ 0.1
AP003461.1-201ENST00000528866 DSG3P32926 999 aa15.61■□□□□ 0.09
AP003461.1-201ENST00000528866 ABCB7O75027 752 aa15.53■□□□□ 0.08
AP003461.1-201ENST00000528866 EHMT2Q96KQ7 1210 aa15.49■□□□□ 0.07
AP003461.1-201ENST00000528866 ATF5Q9Y2D1 282 aaPredicted RBP15.43■□□□□ 0.06
AP003461.1-201ENST00000528866 CSRNP3Q8WYN3 585 aa15.38■□□□□ 0.05
AP003461.1-201ENST00000528866 ATXN8OSP0DMR3 200 aa15.35■□□□□ 0.05
AP003461.1-201ENST00000528866 POLA2Q14181 598 aa15.34■□□□□ 0.05
AP003461.1-201ENST00000528866 ZBTB12Q9Y330 459 aaPredicted RBP15.08■□□□□ 0
AP003461.1-201ENST00000528866 RBM42Q9BTD8 480 aaKnown RBP14.94□□□□□ -0.02
AP003461.1-201ENST00000528866 FBLN2P98095 1184 aa14.9□□□□□ -0.02
AP003461.1-201ENST00000528866 OSCARQ8IYS5 282 aa14.84□□□□□ -0.03
AP003461.1-201ENST00000528866 MKRN4PQ13434 485 aaPredicted RBP14.73□□□□□ -0.05
AP003461.1-201ENST00000528866 AKT1S1Q96B36 256 aa14.65□□□□□ -0.06
AP003461.1-201ENST00000528866 SPDYE2BA6NHP3 402 aa14.62□□□□□ -0.07
AP003461.1-201ENST00000528866 SPDYE6P0CI01 402 aa14.62□□□□□ -0.07
AP003461.1-201ENST00000528866 SPDYE2Q495Y8 402 aa14.62□□□□□ -0.07
AP003461.1-201ENST00000528866 ZNF692Q9BU19 519 aaPredicted RBP14.54□□□□□ -0.08
AP003461.1-201ENST00000528866 REM2Q8IYK8 340 aaPredicted RBP14.51□□□□□ -0.09
AP003461.1-201ENST00000528866 CHRDL2Q6WN34 429 aa14.45□□□□□ -0.1
AP003461.1-201ENST00000528866 SSUH2Q9Y2M2 353 aa14.42□□□□□ -0.1
AP003461.1-201ENST00000528866 POTEHQ6S545 545 aa14.39□□□□□ -0.11
AP003461.1-201ENST00000528866 PITPNM1O00562 1244 aa14.35□□□□□ -0.11
AP003461.1-201ENST00000528866 PABPN1Q86U42 306 aaKnown RBP eCLIP14.33□□□□□ -0.12
AP003461.1-201ENST00000528866 SPDYE4A6NLX3 237 aa14.3□□□□□ -0.12
AP003461.1-201ENST00000528866 CLEC11AQ9Y240 323 aa14.3□□□□□ -0.12
AP003461.1-201ENST00000528866 SPDYE1Q8NFV5 336 aaPredicted RBP14.29□□□□□ -0.12
AP003461.1-201ENST00000528866 PIP4P2Q8N4L2 257 aa14.17□□□□□ -0.14
AP003461.1-201ENST00000528866 FXR2P51116 673 aaKnown RBP eCLIP14.11□□□□□ -0.15
AP003461.1-201ENST00000528866 PRR29P0C7W0 189 aa14.09□□□□□ -0.15
AP003461.1-201ENST00000528866 PRKAR2AP13861 404 aaKnown RBP14.02□□□□□ -0.17
AP003461.1-201ENST00000528866 STAG3Q9UJ98 1225 aa14.02□□□□□ -0.17
AP003461.1-201ENST00000528866 FKBP8Q14318 412 aa14□□□□□ -0.17
AP003461.1-201ENST00000528866 CHADLQ6NUI6 762 aa13.94□□□□□ -0.18
AP003461.1-201ENST00000528866 PROM2Q8N271 834 aa13.91□□□□□ -0.18
AP003461.1-201ENST00000528866 HAX1O00165 279 aa13.88□□□□□ -0.19
AP003461.1-201ENST00000528866 CREBZFQ9NS37 354 aa13.76□□□□□ -0.21
AP003461.1-201ENST00000528866 FARP1Q9Y4F1 1045 aaPredicted RBP13.75□□□□□ -0.21
AP003461.1-201ENST00000528866 SP7Q8TDD2 431 aaPredicted RBP13.66□□□□□ -0.22
AP003461.1-201ENST00000528866 C19orf67A6NJJ6 358 aa13.65□□□□□ -0.22
AP003461.1-201ENST00000528866 PLEKHG5O94827 1062 aa13.64□□□□□ -0.23
AP003461.1-201ENST00000528866 EVX2Q03828 476 aa13.64□□□□□ -0.23
AP003461.1-201ENST00000528866 MIER1Q8N108 512 aa13.64□□□□□ -0.23
AP003461.1-201ENST00000528866 NPM1P06748 294 aaKnown RBP eCLIP13.6□□□□□ -0.23
AP003461.1-201ENST00000528866 CD44P16070 742 aaKnown RBP13.6□□□□□ -0.23
AP003461.1-201ENST00000528866 PLCD3Q8N3E9 789 aa13.6□□□□□ -0.23
AP003461.1-201ENST00000528866 FBXO3Q9UK99 471 aa13.6□□□□□ -0.23
AP003461.1-201ENST00000528866 MNX1P50219 401 aaPredicted RBP13.53□□□□□ -0.24
AP003461.1-201ENST00000528866 PAK3O75914 559 aaPredicted RBP13.49□□□□□ -0.25
AP003461.1-201ENST00000528866 ZRANB1Q9UGI0 708 aa13.48□□□□□ -0.25
AP003461.1-201ENST00000528866 ZBTB47Q9UFB7 747 aaPredicted RBP13.44□□□□□ -0.26
AP003461.1-201ENST00000528866 VASPP50552 380 aaPredicted RBP13.4□□□□□ -0.26
AP003461.1-201ENST00000528866 GABBR2O75899 941 aa13.38□□□□□ -0.27
AP003461.1-201ENST00000528866 TSPYL2Q9H2G4 693 aaPredicted RBP13.37□□□□□ -0.27
AP003461.1-201ENST00000528866 ZNF579Q8NAF0 562 aaKnown RBP13.36□□□□□ -0.27
AP003461.1-201ENST00000528866 KLHL34Q8N239 644 aa13.33□□□□□ -0.28
AP003461.1-201ENST00000528866 PHF12Q96QT6 1004 aa13.31□□□□□ -0.28
AP003461.1-201ENST00000528866 CLCN6P51797 869 aa13.3□□□□□ -0.28
AP003461.1-201ENST00000528866 RASEFQ8IZ41 740 aa13.3□□□□□ -0.28
AP003461.1-201ENST00000528866 NUBP1P53384 320 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms