RNA–Protein interactions for RNA: ENST00000528594.5

PHLDB1-214, Transcript of pleckstrin homology like domain family B member 1, humanhuman

TSL 2

Gene PHLDB1, Length 5,787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHLDB1-214ENST00000528594 DCAF8L2P0C7V8 631 aa25.13■■□□□ 1.61
PHLDB1-214ENST00000528594 PELP1Q8IZL8 1130 aaKnown RBP24.24■■□□□ 1.47
PHLDB1-214ENST00000528594 SUPT5HO00267 1087 aaKnown RBP24■■□□□ 1.43
PHLDB1-214ENST00000528594 APLP2Q06481 763 aa23.44■■□□□ 1.34
PHLDB1-214ENST00000528594 NISCHQ9Y2I1 1504 aa23.32■■□□□ 1.32
PHLDB1-214ENST00000528594 SHROOM4Q9ULL8 1493 aa23.31■■□□□ 1.32
PHLDB1-214ENST00000528594 EHMT2Q96KQ7 1210 aa23.27■■□□□ 1.32
PHLDB1-214ENST00000528594 FAM9AQ8IZU1 332 aaPredicted RBP23.14■■□□□ 1.3
PHLDB1-214ENST00000528594 CCER1Q8TC90 406 aaPredicted RBP23.13■■□□□ 1.29
PHLDB1-214ENST00000528594 ERICH6Q7L0X2 663 aa23.12■■□□□ 1.29
PHLDB1-214ENST00000528594 CENPBP07199 599 aaPredicted RBP23.01■■□□□ 1.27
PHLDB1-214ENST00000528594 ZEB1P37275 1124 aaPredicted RBP22.9■■□□□ 1.26
PHLDB1-214ENST00000528594 MYT1Q01538 1121 aa22.78■■□□□ 1.24
PHLDB1-214ENST00000528594 PCGF6Q9BYE7 350 aa22.72■■□□□ 1.23
PHLDB1-214ENST00000528594 TTBK1Q5TCY1 1321 aaPredicted RBP22.6■■□□□ 1.21
PHLDB1-214ENST00000528594 NEFLP07196 543 aa22.57■■□□□ 1.2
PHLDB1-214ENST00000528594 TRIM41Q8WV44 630 aa22.35■■□□□ 1.17
PHLDB1-214ENST00000528594 ATP1B4Q9UN42 357 aaPredicted RBP22.28■■□□□ 1.16
PHLDB1-214ENST00000528594 RANGAP1P46060 587 aaPredicted RBP22.28■■□□□ 1.16
PHLDB1-214ENST00000528594 UBTFP17480 764 aaKnown RBP22.17■■□□□ 1.14
PHLDB1-214ENST00000528594 YTHDC1Q96MU7 727 aaKnown RBP22.14■■□□□ 1.13
PHLDB1-214ENST00000528594 DAXXQ9UER7 740 aaPredicted RBP22.06■■□□□ 1.12
PHLDB1-214ENST00000528594 TRIM26Q12899 539 aaPredicted RBP21.85■■□□□ 1.09
PHLDB1-214ENST00000528594 HRCP23327 699 aa21.62■■□□□ 1.05
PHLDB1-214ENST00000528594 POLR3GLQ9BT43 218 aa21.58■■□□□ 1.04
PHLDB1-214ENST00000528594 PPARGC1BQ86YN6 1023 aaKnown RBP21.56■■□□□ 1.04
PHLDB1-214ENST00000528594 RTL5Q5HYW3 569 aaPredicted RBP21.55■■□□□ 1.04
PHLDB1-214ENST00000528594 MYT1LQ9UL68 1186 aa21.53■■□□□ 1.04
PHLDB1-214ENST00000528594 ZNF316A6NFI3 1004 aaPredicted RBP21.5■■□□□ 1.03
PHLDB1-214ENST00000528594 ITGAEP38570 1179 aa21.46■■□□□ 1.03
PHLDB1-214ENST00000528594 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.46■■□□□ 1.03
PHLDB1-214ENST00000528594 HNRNPUL2Q1KMD3 747 aaKnown RBP21.46■■□□□ 1.03
PHLDB1-214ENST00000528594 CLSPNQ9HAW4 1339 aa21.36■■□□□ 1.01
PHLDB1-214ENST00000528594 SLC4A1APQ9BWU0 796 aaKnown RBP21.23■□□□□ 0.99
PHLDB1-214ENST00000528594 DIEXFQ68CQ4 756 aaKnown RBP21.2■□□□□ 0.98
PHLDB1-214ENST00000528594 CNGB1Q14028 1251 aaPredicted RBP21.2■□□□□ 0.98
PHLDB1-214ENST00000528594 LOC105371045A0A1W2PR82 267 aa21.07■□□□□ 0.96
PHLDB1-214ENST00000528594 CHIC1Q5VXU3 224 aa21.07■□□□□ 0.96
PHLDB1-214ENST00000528594 ZBTB47Q9UFB7 747 aaPredicted RBP21.02■□□□□ 0.96
PHLDB1-214ENST00000528594 CDK11AQ9UQ88 783 aaPredicted RBP21.01■□□□□ 0.95
PHLDB1-214ENST00000528594 FAM50AQ14320 339 aaKnown RBP20.97■□□□□ 0.95
PHLDB1-214ENST00000528594 TRIM52Q96A61 297 aa20.95■□□□□ 0.94
PHLDB1-214ENST00000528594 ANP32CO43423 234 aa20.95■□□□□ 0.94
PHLDB1-214ENST00000528594 NEUROD1Q13562 356 aa20.82■□□□□ 0.92
PHLDB1-214ENST00000528594 BCANQ96GW7 911 aa20.81■□□□□ 0.92
PHLDB1-214ENST00000528594 GTF3C3Q9Y5Q9 886 aa20.81■□□□□ 0.92
PHLDB1-214ENST00000528594 CANXP27824 592 aaKnown RBP20.78■□□□□ 0.92
PHLDB1-214ENST00000528594 NEFMP07197 916 aa20.72■□□□□ 0.91
PHLDB1-214ENST00000528594 ANP32AP39687 249 aaKnown RBP20.72■□□□□ 0.91
PHLDB1-214ENST00000528594 ZNF326Q5BKZ1 582 aaKnown RBP20.66■□□□□ 0.9
PHLDB1-214ENST00000528594 ANP32BQ92688 251 aaKnown RBP20.59■□□□□ 0.89
PHLDB1-214ENST00000528594 SLC24A1O60721 1099 aa20.52■□□□□ 0.88
PHLDB1-214ENST00000528594 ACIN1Q9UKV3 1341 aaKnown RBP20.51■□□□□ 0.87
PHLDB1-214ENST00000528594 BCL11AQ9H165 835 aa20.41■□□□□ 0.86
PHLDB1-214ENST00000528594 GLIPR1L2Q4G1C9 344 aa20.41■□□□□ 0.86
PHLDB1-214ENST00000528594 UPF2Q9HAU5 1272 aaKnown RBP20.41■□□□□ 0.86
PHLDB1-214ENST00000528594 NPM2Q86SE8 214 aaKnown RBP20.4■□□□□ 0.86
PHLDB1-214ENST00000528594 HSP90AA1P07900 732 aaKnown RBP20.37■□□□□ 0.85
PHLDB1-214ENST00000528594 EIF5BO60841 1220 aaKnown RBP20.31■□□□□ 0.84
PHLDB1-214ENST00000528594 PABPN1Q86U42 306 aaKnown RBP eCLIP20.28■□□□□ 0.84
PHLDB1-214ENST00000528594 FBLN2P98095 1184 aa20.25■□□□□ 0.83
PHLDB1-214ENST00000528594 FKBP8Q14318 412 aa20.25■□□□□ 0.83
PHLDB1-214ENST00000528594 TONSLQ96HA7 1378 aa20.22■□□□□ 0.83
PHLDB1-214ENST00000528594 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.2■□□□□ 0.82
PHLDB1-214ENST00000528594 ABCC9O60706 1549 aa20.17■□□□□ 0.82
PHLDB1-214ENST00000528594 CSRNP3Q8WYN3 585 aa20.17■□□□□ 0.82
PHLDB1-214ENST00000528594 ZNF777Q9ULD5 760 aaPredicted RBP20.15■□□□□ 0.82
PHLDB1-214ENST00000528594 HNRNPUQ00839 825 aaKnown RBP eCLIP20.14■□□□□ 0.81
PHLDB1-214ENST00000528594 ESF1Q9H501 851 aaKnown RBP20.12■□□□□ 0.81
PHLDB1-214ENST00000528594 P3H3Q8IVL6 736 aa20.1■□□□□ 0.81
PHLDB1-214ENST00000528594 CCDC136Q96JN2 1154 aa20.08■□□□□ 0.8
PHLDB1-214ENST00000528594 FAM9BQ8IZU0 186 aa20.05■□□□□ 0.8
PHLDB1-214ENST00000528594 STAG3Q9UJ98 1225 aa20.04■□□□□ 0.8
PHLDB1-214ENST00000528594 ARID3CA6NKF2 412 aa20.02■□□□□ 0.8
PHLDB1-214ENST00000528594 TMC1Q8TDI8 760 aa20.01■□□□□ 0.79
PHLDB1-214ENST00000528594 WDR43Q15061 677 aaKnown RBP eCLIP20■□□□□ 0.79
PHLDB1-214ENST00000528594 CHGAP10645 457 aaKnown RBP19.98■□□□□ 0.79
PHLDB1-214ENST00000528594 DDX10Q13206 875 aaKnown RBP19.97■□□□□ 0.79
PHLDB1-214ENST00000528594 ANP32EQ9BTT0 268 aa19.96■□□□□ 0.79
PHLDB1-214ENST00000528594 MYH16Q9H6N6 1097 aa19.96■□□□□ 0.79
PHLDB1-214ENST00000528594 CDK11BP21127 795 aaKnown RBP19.96■□□□□ 0.79
PHLDB1-214ENST00000528594 DDRGK1Q96HY6 314 aa19.95■□□□□ 0.78
PHLDB1-214ENST00000528594 NBR1Q14596 966 aa19.95■□□□□ 0.78
PHLDB1-214ENST00000528594 DCAF1Q9Y4B6 1507 aa19.94■□□□□ 0.78
PHLDB1-214ENST00000528594 BECN1Q14457 450 aa19.91■□□□□ 0.78
PHLDB1-214ENST00000528594 NCLP19338 710 aaKnown RBP19.88■□□□□ 0.77
PHLDB1-214ENST00000528594 MRS2Q9HD23 443 aa19.87■□□□□ 0.77
PHLDB1-214ENST00000528594 SALL2Q9Y467 1007 aaPredicted RBP19.86■□□□□ 0.77
PHLDB1-214ENST00000528594 GOLGA6L22H0YM25 854 aa19.83■□□□□ 0.76
PHLDB1-214ENST00000528594 NPM1P06748 294 aaKnown RBP eCLIP19.83■□□□□ 0.76
PHLDB1-214ENST00000528594 TRIM44Q96DX7 344 aaPredicted RBP19.83■□□□□ 0.76
PHLDB1-214ENST00000528594 ARXQ96QS3 562 aa19.81■□□□□ 0.76
PHLDB1-214ENST00000528594 TNNT2P45379 298 aaPredicted RBP19.76■□□□□ 0.75
PHLDB1-214ENST00000528594 TSPY4P0CV99 314 aa19.74■□□□□ 0.75
PHLDB1-214ENST00000528594 TSPY10P0CW01 314 aa19.74■□□□□ 0.75
PHLDB1-214ENST00000528594 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.72■□□□□ 0.75
PHLDB1-214ENST00000528594 EIF4G2P78344 907 aaKnown RBP eCLIP19.7■□□□□ 0.742e-8■■■■■ 35.8
PHLDB1-214ENST00000528594 CHIC2Q9UKJ5 165 aa19.69■□□□□ 0.74
PHLDB1-214ENST00000528594 CASC1Q6TDU7 716 aa19.67■□□□□ 0.74
PHLDB1-214ENST00000528594 ZRSR1Q15695 479 aaKnown RBP19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms