RNA–Protein interactions for RNA: ENST00000528025.5

PLEC-213, Transcript of plectin, humanhuman

TSL 5

Gene PLEC, Length 2,115 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLEC-213ENST00000528025 NISCHQ9Y2I1 1504 aa40.39■■■■■ 4.06
PLEC-213ENST00000528025 CCDC180Q9P1Z9 1646 aa34.48■■■■□ 3.11
PLEC-213ENST00000528025 ZCCHC6Q5VYS8 1495 aaKnown RBP34.19■■■■□ 3.06
PLEC-213ENST00000528025 SHROOM4Q9ULL8 1493 aa34.09■■■■□ 3.05
PLEC-213ENST00000528025 SUPT5HO00267 1087 aaKnown RBP33.44■■■□□ 2.94
PLEC-213ENST00000528025 DCAF1Q9Y4B6 1507 aa33.3■■■□□ 2.92
PLEC-213ENST00000528025 DCAF8L2P0C7V8 631 aa33.16■■■□□ 2.9
PLEC-213ENST00000528025 CHIC1Q5VXU3 224 aa32.64■■■□□ 2.82
PLEC-213ENST00000528025 MYO15BQ96JP2 1530 aa32.45■■■□□ 2.78
PLEC-213ENST00000528025 ABCC9O60706 1549 aa32.25■■■□□ 2.75
PLEC-213ENST00000528025 SCRIBQ14160 1630 aa32.08■■■□□ 2.73
PLEC-213ENST00000528025 RSF1Q96T23 1441 aaPredicted RBP31.9■■■□□ 2.7
PLEC-213ENST00000528025 NACADO15069 1562 aa31.85■■■□□ 2.69
PLEC-213ENST00000528025 RB1CC1Q8TDY2 1594 aa31.61■■■□□ 2.65
PLEC-213ENST00000528025 HRCP23327 699 aa31.57■■■□□ 2.64
PLEC-213ENST00000528025 LOC105371045A0A1W2PR82 267 aa31.53■■■□□ 2.64
PLEC-213ENST00000528025 PCGF6Q9BYE7 350 aa31.46■■■□□ 2.63
PLEC-213ENST00000528025 CECR2Q9BXF3 1484 aa31.39■■■□□ 2.62
PLEC-213ENST00000528025 MROH2BQ7Z745 1585 aa31.32■■■□□ 2.6
PLEC-213ENST00000528025 TRIM41Q8WV44 630 aa31.27■■■□□ 2.6
PLEC-213ENST00000528025 WIZO95785 1651 aa31.14■■■□□ 2.58
PLEC-213ENST00000528025 BAZ1AQ9NRL2 1556 aaPredicted RBP31.06■■■□□ 2.56
PLEC-213ENST00000528025 TRIM26Q12899 539 aaPredicted RBP31.03■■■□□ 2.56
PLEC-213ENST00000528025 FAM9AQ8IZU1 332 aaPredicted RBP30.84■■■□□ 2.53
PLEC-213ENST00000528025 EIF4G1Q04637 1599 aaKnown RBP30.82■■■□□ 2.52
PLEC-213ENST00000528025 UNC13AQ9UPW8 1703 aa30.79■■■□□ 2.52
PLEC-213ENST00000528025 SMARCA4P51532 1647 aa30.76■■■□□ 2.52
PLEC-213ENST00000528025 TOP2AP11388 1531 aaKnown RBP30.76■■■□□ 2.51
PLEC-213ENST00000528025 PPARGC1BQ86YN6 1023 aaKnown RBP30.72■■■□□ 2.51
PLEC-213ENST00000528025 SMARCA2P51531 1590 aa30.56■■■□□ 2.48
PLEC-213ENST00000528025 CCDC88BA6NC98 1476 aa30.55■■■□□ 2.48
PLEC-213ENST00000528025 EHMT2Q96KQ7 1210 aa30.43■■■□□ 2.46
PLEC-213ENST00000528025 ZEB1P37275 1124 aaPredicted RBP30.42■■■□□ 2.46
PLEC-213ENST00000528025 BICRAQ9NZM4 1560 aa30.41■■■□□ 2.46
PLEC-213ENST00000528025 ABCC8Q09428 1581 aa30.38■■■□□ 2.45
PLEC-213ENST00000528025 PEG3Q9GZU2 1588 aa30.28■■■□□ 2.44
PLEC-213ENST00000528025 PABPN1Q86U42 306 aaKnown RBP eCLIP30.22■■■□□ 2.43
PLEC-213ENST00000528025 EEA1Q15075 1411 aa30.15■■■□□ 2.42
PLEC-213ENST00000528025 SOGA1O94964 1423 aa30.1■■■□□ 2.41
PLEC-213ENST00000528025 WRNQ14191 1432 aaPredicted RBP eCLIP30.07■■■□□ 2.47e-7■■■■■ 41.8
PLEC-213ENST00000528025 TNIKQ9UKE5 1360 aa30.03■■■□□ 2.4
PLEC-213ENST00000528025 CEP162Q5TB80 1403 aa29.99■■■□□ 2.39
PLEC-213ENST00000528025 CSRNP3Q8WYN3 585 aa29.98■■■□□ 2.39
PLEC-213ENST00000528025 ATAD2BQ9ULI0 1458 aa29.97■■■□□ 2.39
PLEC-213ENST00000528025 RUSC2Q8N2Y8 1516 aa29.92■■■□□ 2.38
PLEC-213ENST00000528025 BAZ1BQ9UIG0 1483 aaKnown RBP29.86■■■□□ 2.37
PLEC-213ENST00000528025 GOLGA3Q08378 1498 aa29.85■■■□□ 2.37
PLEC-213ENST00000528025 SYNJ1O43426 1573 aa29.8■■■□□ 2.36
PLEC-213ENST00000528025 UBTFP17480 764 aaKnown RBP29.75■■■□□ 2.35
PLEC-213ENST00000528025 KIF21BO75037 1637 aa29.71■■■□□ 2.35
PLEC-213ENST00000528025 CEP164Q9UPV0 1460 aa29.7■■■□□ 2.34
PLEC-213ENST00000528025 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.65■■■□□ 2.34
PLEC-213ENST00000528025 CCER1Q8TC90 406 aaPredicted RBP29.63■■■□□ 2.33
PLEC-213ENST00000528025 TOP2BQ02880 1626 aa29.52■■■□□ 2.32
PLEC-213ENST00000528025 TTBK1Q5TCY1 1321 aaPredicted RBP29.48■■■□□ 2.31
PLEC-213ENST00000528025 HMGXB3Q12766 1538 aa29.47■■■□□ 2.31
PLEC-213ENST00000528025 CLIP1P30622 1438 aa29.45■■■□□ 2.31
PLEC-213ENST00000528025 NCAPD3P42695 1498 aa29.45■■■□□ 2.3
PLEC-213ENST00000528025 BIVM-ERCC5R4GMW8 1640 aa29.44■■■□□ 2.3
PLEC-213ENST00000528025 RAPGEF2Q9Y4G8 1499 aa29.4■■■□□ 2.3
PLEC-213ENST00000528025 VPS8Q8N3P4 1428 aa29.37■■■□□ 2.29
PLEC-213ENST00000528025 ERICH3Q5RHP9 1530 aa29.26■■■□□ 2.27
PLEC-213ENST00000528025 PRXQ9BXM0 1461 aa29.22■■■□□ 2.27
PLEC-213ENST00000528025 CUX1P39880 1505 aa29.19■■■□□ 2.26
PLEC-213ENST00000528025 CFTRP13569 1480 aa29.18■■■□□ 2.26
PLEC-213ENST00000528025 APLP2Q06481 763 aa29.14■■■□□ 2.25
PLEC-213ENST00000528025 KIF27Q86VH2 1401 aa29.07■■■□□ 2.24
PLEC-213ENST00000528025 DIEXFQ68CQ4 756 aaKnown RBP29.05■■■□□ 2.24
PLEC-213ENST00000528025 PRDM2Q13029 1718 aa29.01■■■□□ 2.23
PLEC-213ENST00000528025 HNRNPUL2Q1KMD3 747 aaKnown RBP29.01■■■□□ 2.23
PLEC-213ENST00000528025 ARAP1Q96P48 1450 aa29■■■□□ 2.23
PLEC-213ENST00000528025 RANGAP1P46060 587 aaPredicted RBP28.98■■■□□ 2.23
PLEC-213ENST00000528025 SCAF1Q9H7N4 1312 aaKnown RBP28.96■■■□□ 2.23
PLEC-213ENST00000528025 ZNF316A6NFI3 1004 aaPredicted RBP28.9■■■□□ 2.22
PLEC-213ENST00000528025 CADPSQ9ULU8 1353 aa28.83■■■□□ 2.21
PLEC-213ENST00000528025 ACIN1Q9UKV3 1341 aaKnown RBP28.8■■■□□ 2.2
PLEC-213ENST00000528025 CC2D2AQ9P2K1 1620 aa28.76■■■□□ 2.19
PLEC-213ENST00000528025 ARHGAP35Q9NRY4 1499 aa28.76■■■□□ 2.19
PLEC-213ENST00000528025 CUX2O14529 1486 aa28.74■■■□□ 2.19
PLEC-213ENST00000528025 DNAJC5BQ9UF47 199 aa28.73■■■□□ 2.19
PLEC-213ENST00000528025 IGF1RP08069 1367 aa28.73■■■□□ 2.19
PLEC-213ENST00000528025 KANK4Q5T7N3 995 aaPredicted RBP28.73■■■□□ 2.19
PLEC-213ENST00000528025 RRBP1Q9P2E9 1410 aaKnown RBP28.7■■■□□ 2.19
PLEC-213ENST00000528025 CLSPNQ9HAW4 1339 aa28.7■■■□□ 2.19
PLEC-213ENST00000528025 NEUROD1Q13562 356 aa28.69■■■□□ 2.18
PLEC-213ENST00000528025 CENPBP07199 599 aaPredicted RBP28.68■■■□□ 2.18
PLEC-213ENST00000528025 FGD5Q6ZNL6 1462 aa28.66■■■□□ 2.18
PLEC-213ENST00000528025 CARMIL1Q5VZK9 1371 aa28.6■■■□□ 2.17
PLEC-213ENST00000528025 DHX57Q6P158 1386 aaKnown RBP28.6■■■□□ 2.17
PLEC-213ENST00000528025 MAP3K1Q13233 1512 aa28.56■■■□□ 2.16
PLEC-213ENST00000528025 CCNB3Q8WWL7 1395 aa28.53■■■□□ 2.16
PLEC-213ENST00000528025 FANCD2Q9BXW9 1451 aa28.53■■■□□ 2.16
PLEC-213ENST00000528025 TIAM1Q13009 1591 aa28.47■■■□□ 2.15
PLEC-213ENST00000528025 PELP1Q8IZL8 1130 aaKnown RBP28.47■■■□□ 2.15
PLEC-213ENST00000528025 DNMBPQ6XZF7 1577 aa28.45■■■□□ 2.15
PLEC-213ENST00000528025 ABCA10Q8WWZ4 1543 aa28.4■■■□□ 2.14
PLEC-213ENST00000528025 MIER1Q8N108 512 aa28.39■■■□□ 2.14
PLEC-213ENST00000528025 FHAD1B1AJZ9 1412 aa28.38■■■□□ 2.13
PLEC-213ENST00000528025 GTF3C3Q9Y5Q9 886 aa28.38■■■□□ 2.13
PLEC-213ENST00000528025 TOPBP1Q92547 1522 aa28.36■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms