RNA–Protein interactions for RNA: ENST00000527769.5

PAX6-221, Transcript of paired box 6, humanhuman

TSL 3

Gene PAX6, Length 487 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-221ENST00000527769 AEBP2Q6ZN18 517 aaPredicted RBP27.18■■□□□ 1.94
PAX6-221ENST00000527769 CHIC1Q5VXU3 224 aa26.49■■□□□ 1.83
PAX6-221ENST00000527769 PHF23Q9BUL5 403 aaPredicted RBP23.24■■□□□ 1.31
PAX6-221ENST00000527769 SENP3Q9H4L4 574 aaPredicted RBP23.15■■□□□ 1.3
PAX6-221ENST00000527769 NISCHQ9Y2I1 1504 aa22.62■■□□□ 1.21
PAX6-221ENST00000527769 PLPPR3Q6T4P5 718 aa21.49■■□□□ 1.03
PAX6-221ENST00000527769 FOXD1Q16676 465 aa21.45■■□□□ 1.02
PAX6-221ENST00000527769 PPP6R1Q9UPN7 881 aa20.53■□□□□ 0.88
PAX6-221ENST00000527769 ADRA2BP18089 450 aa20.52■□□□□ 0.88
PAX6-221ENST00000527769 PIAS4Q8N2W9 510 aaPredicted RBP20.24■□□□□ 0.83
PAX6-221ENST00000527769 CCDC180Q9P1Z9 1646 aa19.96■□□□□ 0.79
PAX6-221ENST00000527769 MSH5O43196 834 aa19.88■□□□□ 0.77
PAX6-221ENST00000527769 ZCCHC6Q5VYS8 1495 aaKnown RBP18.94■□□□□ 0.62
PAX6-221ENST00000527769 PPP4R3CPQ6ZMV5 832 aa18.9■□□□□ 0.62
PAX6-221ENST00000527769 SCAF1Q9H7N4 1312 aaKnown RBP18.85■□□□□ 0.61
PAX6-221ENST00000527769 ABCC9O60706 1549 aa18.82■□□□□ 0.6
PAX6-221ENST00000527769 DCAF1Q9Y4B6 1507 aa18.8■□□□□ 0.6
PAX6-221ENST00000527769 DCAF8L2P0C7V8 631 aa18.68■□□□□ 0.58
PAX6-221ENST00000527769 MYO15BQ96JP2 1530 aa18.68■□□□□ 0.58
PAX6-221ENST00000527769 MAPK8IP2Q13387 824 aaPredicted RBP18.63■□□□□ 0.57
PAX6-221ENST00000527769 NACADO15069 1562 aa18.6■□□□□ 0.57
PAX6-221ENST00000527769 RB1CC1Q8TDY2 1594 aa18.49■□□□□ 0.55
PAX6-221ENST00000527769 DMRT2Q9Y5R5 561 aa18.44■□□□□ 0.54
PAX6-221ENST00000527769 NCBP3Q53F19 620 aaKnown RBP18.41■□□□□ 0.54
PAX6-221ENST00000527769 CNKSR2Q8WXI2 1034 aa18.41■□□□□ 0.54
PAX6-221ENST00000527769 KCNA4P22459 653 aa18.32■□□□□ 0.52
PAX6-221ENST00000527769 POTEDQ86YR6 584 aa18.24■□□□□ 0.51
PAX6-221ENST00000527769 SCRIBQ14160 1630 aa18.14■□□□□ 0.49
PAX6-221ENST00000527769 SHROOM4Q9ULL8 1493 aa18.13■□□□□ 0.49
PAX6-221ENST00000527769 NPM3O75607 178 aaKnown RBP18.09■□□□□ 0.49
PAX6-221ENST00000527769 UNC13AQ9UPW8 1703 aa18.08■□□□□ 0.48
PAX6-221ENST00000527769 RNF216Q9NWF9 866 aaPredicted RBP18.07■□□□□ 0.48
PAX6-221ENST00000527769 HOXD11P31277 338 aaPredicted RBP18.02■□□□□ 0.48
PAX6-221ENST00000527769 BICRAQ9NZM4 1560 aa17.79■□□□□ 0.44
PAX6-221ENST00000527769 DCAF8L1A6NGE4 600 aa17.66■□□□□ 0.42
PAX6-221ENST00000527769 PABPN1Q86U42 306 aaKnown RBP eCLIP17.66■□□□□ 0.42
PAX6-221ENST00000527769 DNAJC5BQ9UF47 199 aa17.6■□□□□ 0.41
PAX6-221ENST00000527769 BAZ1AQ9NRL2 1556 aaPredicted RBP17.54■□□□□ 0.4
PAX6-221ENST00000527769 CECR2Q9BXF3 1484 aa17.47■□□□□ 0.39
PAX6-221ENST00000527769 SLC4A1APQ9BWU0 796 aaKnown RBP17.46■□□□□ 0.39
PAX6-221ENST00000527769 SMARCA4P51532 1647 aa17.44■□□□□ 0.38
PAX6-221ENST00000527769 SUPT5HO00267 1087 aaKnown RBP17.42■□□□□ 0.38
PAX6-221ENST00000527769 RSF1Q96T23 1441 aaPredicted RBP17.4■□□□□ 0.38
PAX6-221ENST00000527769 MROH2BQ7Z745 1585 aa17.39■□□□□ 0.37
PAX6-221ENST00000527769 EIF4G1Q04637 1599 aaKnown RBP17.32■□□□□ 0.36
PAX6-221ENST00000527769 PEG3Q9GZU2 1588 aa17.28■□□□□ 0.36
PAX6-221ENST00000527769 WIZO95785 1651 aa17.28■□□□□ 0.36
PAX6-221ENST00000527769 SMARCA2P51531 1590 aa17.26■□□□□ 0.35
PAX6-221ENST00000527769 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.19■□□□□ 0.34
PAX6-221ENST00000527769 ATAD2BQ9ULI0 1458 aa17.17■□□□□ 0.34
PAX6-221ENST00000527769 TOP2AP11388 1531 aaKnown RBP17.14■□□□□ 0.33
PAX6-221ENST00000527769 CC2D2AQ9P2K1 1620 aa17.11■□□□□ 0.33
PAX6-221ENST00000527769 NCAPD3P42695 1498 aa17.11■□□□□ 0.33
PAX6-221ENST00000527769 BAZ1BQ9UIG0 1483 aaKnown RBP17.1■□□□□ 0.33
PAX6-221ENST00000527769 HMGXB3Q12766 1538 aa17.1■□□□□ 0.33
PAX6-221ENST00000527769 SLC4A2P04920 1241 aa17.09■□□□□ 0.33
PAX6-221ENST00000527769 RNF39Q9H2S5 420 aa16.99■□□□□ 0.31
PAX6-221ENST00000527769 FOXD4L1Q9NU39 408 aa16.93■□□□□ 0.3
PAX6-221ENST00000527769 CCDC88BA6NC98 1476 aa16.91■□□□□ 0.3
PAX6-221ENST00000527769 U3KPZ7 1027 aaPredicted RBP16.87■□□□□ 0.29
PAX6-221ENST00000527769 ZBTB22O15209 634 aa16.84■□□□□ 0.29
PAX6-221ENST00000527769 EHMT2Q96KQ7 1210 aa16.83■□□□□ 0.28
PAX6-221ENST00000527769 C1QBPQ07021 282 aaKnown RBP16.8■□□□□ 0.28
PAX6-221ENST00000527769 MYCNP04198 464 aaPredicted RBP16.76■□□□□ 0.27
PAX6-221ENST00000527769 PRDM2Q13029 1718 aa16.73■□□□□ 0.27
PAX6-221ENST00000527769 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.69■□□□□ 0.26
PAX6-221ENST00000527769 HNRNPUL2Q1KMD3 747 aaKnown RBP16.69■□□□□ 0.26
PAX6-221ENST00000527769 CSRNP3Q8WYN3 585 aa16.66■□□□□ 0.26
PAX6-221ENST00000527769 CFTRP13569 1480 aa16.65■□□□□ 0.26
PAX6-221ENST00000527769 CACNB1Q02641 598 aaPredicted RBP16.64■□□□□ 0.25
PAX6-221ENST00000527769 CADPSQ9ULU8 1353 aa16.64■□□□□ 0.25
PAX6-221ENST00000527769 LAMC3Q9Y6N6 1575 aa16.62■□□□□ 0.25
PAX6-221ENST00000527769 SAMD1Q6SPF0 538 aaPredicted RBP16.61■□□□□ 0.25
PAX6-221ENST00000527769 APLP2Q06481 763 aa16.55■□□□□ 0.24
PAX6-221ENST00000527769 TRIM41Q8WV44 630 aa16.49■□□□□ 0.23
PAX6-221ENST00000527769 PDS5BQ9NTI5 1447 aa16.48■□□□□ 0.23
PAX6-221ENST00000527769 WRNQ14191 1432 aaPredicted RBP eCLIP16.45■□□□□ 0.22
PAX6-221ENST00000527769 ABCC8Q09428 1581 aa16.43■□□□□ 0.22
PAX6-221ENST00000527769 FANCD2Q9BXW9 1451 aa16.43■□□□□ 0.22
PAX6-221ENST00000527769 NESP48681 1621 aa16.43■□□□□ 0.22
PAX6-221ENST00000527769 SPINK5Q9NQ38 1064 aaPredicted RBP16.42■□□□□ 0.22
PAX6-221ENST00000527769 CAPN15O75808 1086 aa16.4■□□□□ 0.22
PAX6-221ENST00000527769 BIVM-ERCC5R4GMW8 1640 aa16.38■□□□□ 0.21
PAX6-221ENST00000527769 CEP164Q9UPV0 1460 aa16.38■□□□□ 0.21
PAX6-221ENST00000527769 TOP2BQ02880 1626 aa16.37■□□□□ 0.21
PAX6-221ENST00000527769 KIF21AQ7Z4S6 1674 aa16.36■□□□□ 0.21
PAX6-221ENST00000527769 ATXN8OSP0DMR3 200 aa16.35■□□□□ 0.21
PAX6-221ENST00000527769 SYNJ1O43426 1573 aa16.33■□□□□ 0.2
PAX6-221ENST00000527769 ZNF219Q9P2Y4 722 aaPredicted RBP16.31■□□□□ 0.2
PAX6-221ENST00000527769 DNMBPQ6XZF7 1577 aa16.3■□□□□ 0.2
PAX6-221ENST00000527769 TRHP20396 242 aaPredicted RBP16.29■□□□□ 0.2
PAX6-221ENST00000527769 CUX1P39880 1505 aa16.29■□□□□ 0.2
PAX6-221ENST00000527769 ERCC6Q03468 1493 aa16.26■□□□□ 0.19
PAX6-221ENST00000527769 ATF5Q9Y2D1 282 aaPredicted RBP16.25■□□□□ 0.19
PAX6-221ENST00000527769 TOPBP1Q92547 1522 aa16.23■□□□□ 0.19
PAX6-221ENST00000527769 MRC2Q9UBG0 1479 aa16.22■□□□□ 0.19
PAX6-221ENST00000527769 EEA1Q15075 1411 aa16.22■□□□□ 0.19
PAX6-221ENST00000527769 URB2Q14146 1524 aaKnown RBP16.19■□□□□ 0.18
PAX6-221ENST00000527769 FGD5Q6ZNL6 1462 aa16.16■□□□□ 0.18
PAX6-221ENST00000527769 WDR62O43379 1518 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 168.6 ms