RNA–Protein interactions for RNA: ENST00000527624.1

PCDHA6-202, Transcript of protocadherin alpha 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHA6, Length 2,231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA6-202ENST00000527624 NISCHQ9Y2I1 1504 aa37.95■■■■□ 3.67
PCDHA6-202ENST00000527624 CCDC180Q9P1Z9 1646 aa32.72■■■□□ 2.83
PCDHA6-202ENST00000527624 ZCCHC6Q5VYS8 1495 aaKnown RBP31.96■■■□□ 2.71
PCDHA6-202ENST00000527624 SHROOM4Q9ULL8 1493 aa31.61■■■□□ 2.65
PCDHA6-202ENST00000527624 DCAF8L2P0C7V8 631 aa31.54■■■□□ 2.64
PCDHA6-202ENST00000527624 DCAF1Q9Y4B6 1507 aa31.22■■■□□ 2.59
PCDHA6-202ENST00000527624 ABCC9O60706 1549 aa30.87■■■□□ 2.53
PCDHA6-202ENST00000527624 MYO15BQ96JP2 1530 aa30.65■■■□□ 2.5
PCDHA6-202ENST00000527624 SUPT5HO00267 1087 aaKnown RBP30.62■■■□□ 2.49
PCDHA6-202ENST00000527624 NACADO15069 1562 aa30.43■■■□□ 2.46
PCDHA6-202ENST00000527624 SCRIBQ14160 1630 aa30.42■■■□□ 2.46
PCDHA6-202ENST00000527624 RB1CC1Q8TDY2 1594 aa30.1■■■□□ 2.41
PCDHA6-202ENST00000527624 RSF1Q96T23 1441 aaPredicted RBP29.69■■■□□ 2.34
PCDHA6-202ENST00000527624 CECR2Q9BXF3 1484 aa29.6■■■□□ 2.33
PCDHA6-202ENST00000527624 UNC13AQ9UPW8 1703 aa29.53■■■□□ 2.32
PCDHA6-202ENST00000527624 MROH2BQ7Z745 1585 aa29.42■■■□□ 2.3
PCDHA6-202ENST00000527624 CHIC1Q5VXU3 224 aa29.42■■■□□ 2.3
PCDHA6-202ENST00000527624 PABPN1Q86U42 306 aaKnown RBP eCLIP29.3■■■□□ 2.28
PCDHA6-202ENST00000527624 BICRAQ9NZM4 1560 aa29.25■■■□□ 2.27
PCDHA6-202ENST00000527624 BAZ1AQ9NRL2 1556 aaPredicted RBP29.23■■■□□ 2.27
PCDHA6-202ENST00000527624 WIZO95785 1651 aa29.2■■■□□ 2.27
PCDHA6-202ENST00000527624 SMARCA4P51532 1647 aa29.07■■■□□ 2.24
PCDHA6-202ENST00000527624 TOP2AP11388 1531 aaKnown RBP28.82■■■□□ 2.2
PCDHA6-202ENST00000527624 TRIM41Q8WV44 630 aa28.64■■■□□ 2.18
PCDHA6-202ENST00000527624 CCDC88BA6NC98 1476 aa28.63■■■□□ 2.17
PCDHA6-202ENST00000527624 SMARCA2P51531 1590 aa28.6■■■□□ 2.17
PCDHA6-202ENST00000527624 PEG3Q9GZU2 1588 aa28.6■■■□□ 2.17
PCDHA6-202ENST00000527624 ATAD2BQ9ULI0 1458 aa28.52■■■□□ 2.16
PCDHA6-202ENST00000527624 EIF4G1Q04637 1599 aaKnown RBP28.51■■■□□ 2.15
PCDHA6-202ENST00000527624 LOC105371045A0A1W2PR82 267 aa28.45■■■□□ 2.15
PCDHA6-202ENST00000527624 BAZ1BQ9UIG0 1483 aaKnown RBP28.4■■■□□ 2.14
PCDHA6-202ENST00000527624 FAM9AQ8IZU1 332 aaPredicted RBP28.3■■■□□ 2.12
PCDHA6-202ENST00000527624 ABCC8Q09428 1581 aa28.24■■■□□ 2.11
PCDHA6-202ENST00000527624 NCAPD3P42695 1498 aa28.14■■■□□ 2.09
PCDHA6-202ENST00000527624 HMGXB3Q12766 1538 aa28.09■■■□□ 2.09
PCDHA6-202ENST00000527624 EHMT2Q96KQ7 1210 aa28.02■■■□□ 2.08
PCDHA6-202ENST00000527624 WRNQ14191 1432 aaPredicted RBP eCLIP27.93■■■□□ 2.06
PCDHA6-202ENST00000527624 CC2D2AQ9P2K1 1620 aa27.83■■■□□ 2.05
PCDHA6-202ENST00000527624 SOGA1O94964 1423 aa27.82■■■□□ 2.04
PCDHA6-202ENST00000527624 SYNJ1O43426 1573 aa27.8■■■□□ 2.04
PCDHA6-202ENST00000527624 RUSC2Q8N2Y8 1516 aa27.71■■■□□ 2.03
PCDHA6-202ENST00000527624 CFTRP13569 1480 aa27.67■■■□□ 2.02
PCDHA6-202ENST00000527624 EEA1Q15075 1411 aa27.64■■■□□ 2.01
PCDHA6-202ENST00000527624 PCGF6Q9BYE7 350 aa27.61■■■□□ 2.01
PCDHA6-202ENST00000527624 CSRNP3Q8WYN3 585 aa27.6■■■□□ 2.01
PCDHA6-202ENST00000527624 TOP2BQ02880 1626 aa27.57■■■□□ 2
PCDHA6-202ENST00000527624 CADPSQ9ULU8 1353 aa27.51■■■□□ 2
PCDHA6-202ENST00000527624 BIVM-ERCC5R4GMW8 1640 aa27.48■■□□□ 1.99
PCDHA6-202ENST00000527624 CUX1P39880 1505 aa27.46■■□□□ 1.99
PCDHA6-202ENST00000527624 HRCP23327 699 aa27.41■■□□□ 1.98
PCDHA6-202ENST00000527624 PRDM2Q13029 1718 aa27.4■■□□□ 1.98
PCDHA6-202ENST00000527624 UBTFP17480 764 aaKnown RBP27.39■■□□□ 1.98
PCDHA6-202ENST00000527624 GOLGA3Q08378 1498 aa27.37■■□□□ 1.97
PCDHA6-202ENST00000527624 TNIKQ9UKE5 1360 aa27.37■■□□□ 1.97
PCDHA6-202ENST00000527624 TRIM26Q12899 539 aaPredicted RBP27.35■■□□□ 1.97
PCDHA6-202ENST00000527624 CEP162Q5TB80 1403 aa27.33■■□□□ 1.97
PCDHA6-202ENST00000527624 CEP164Q9UPV0 1460 aa27.31■■□□□ 1.96
PCDHA6-202ENST00000527624 KIF21BO75037 1637 aa27.28■■□□□ 1.96
PCDHA6-202ENST00000527624 NESP48681 1621 aa27.25■■□□□ 1.95
PCDHA6-202ENST00000527624 DNAJC5BQ9UF47 199 aa27.25■■□□□ 1.95
PCDHA6-202ENST00000527624 FANCD2Q9BXW9 1451 aa27.24■■□□□ 1.95
PCDHA6-202ENST00000527624 RAPGEF2Q9Y4G8 1499 aa27.2■■□□□ 1.94
PCDHA6-202ENST00000527624 PPARGC1BQ86YN6 1023 aaKnown RBP27.18■■□□□ 1.94
PCDHA6-202ENST00000527624 KIF27Q86VH2 1401 aa27.15■■□□□ 1.94
PCDHA6-202ENST00000527624 FGD5Q6ZNL6 1462 aa27.1■■□□□ 1.93
PCDHA6-202ENST00000527624 PRXQ9BXM0 1461 aa27.07■■□□□ 1.92
PCDHA6-202ENST00000527624 LAMC3Q9Y6N6 1575 aa27.07■■□□□ 1.92
PCDHA6-202ENST00000527624 CUX2O14529 1486 aa27.05■■□□□ 1.92
PCDHA6-202ENST00000527624 CLIP1P30622 1438 aa27.01■■□□□ 1.91
PCDHA6-202ENST00000527624 ERICH3Q5RHP9 1530 aa27■■□□□ 1.91
PCDHA6-202ENST00000527624 RANGAP1P46060 587 aaPredicted RBP27■■□□□ 1.91
PCDHA6-202ENST00000527624 DNMBPQ6XZF7 1577 aa26.99■■□□□ 1.91
PCDHA6-202ENST00000527624 TOPBP1Q92547 1522 aa26.98■■□□□ 1.91
PCDHA6-202ENST00000527624 TTBK1Q5TCY1 1321 aaPredicted RBP26.92■■□□□ 1.9
PCDHA6-202ENST00000527624 PDS5BQ9NTI5 1447 aa26.91■■□□□ 1.9
PCDHA6-202ENST00000527624 IGF1RP08069 1367 aa26.91■■□□□ 1.9
PCDHA6-202ENST00000527624 POLA1P09884 1462 aaPredicted RBP26.9■■□□□ 1.9
PCDHA6-202ENST00000527624 RAD54L2Q9Y4B4 1467 aa26.9■■□□□ 1.9
PCDHA6-202ENST00000527624 URB2Q14146 1524 aaKnown RBP26.88■■□□□ 1.89
PCDHA6-202ENST00000527624 ABCA10Q8WWZ4 1543 aa26.8■■□□□ 1.88
PCDHA6-202ENST00000527624 KIF21AQ7Z4S6 1674 aa26.8■■□□□ 1.88
PCDHA6-202ENST00000527624 VPS8Q8N3P4 1428 aa26.79■■□□□ 1.88
PCDHA6-202ENST00000527624 CARMIL1Q5VZK9 1371 aa26.78■■□□□ 1.88
PCDHA6-202ENST00000527624 ARAP1Q96P48 1450 aa26.67■■□□□ 1.86
PCDHA6-202ENST00000527624 TDRD9Q8NDG6 1382 aaKnown RBP26.63■■□□□ 1.85
PCDHA6-202ENST00000527624 WDR97A6NE52 1622 aa26.62■■□□□ 1.85
PCDHA6-202ENST00000527624 APLP2Q06481 763 aa26.61■■□□□ 1.85
PCDHA6-202ENST00000527624 ARHGAP35Q9NRY4 1499 aa26.58■■□□□ 1.85
PCDHA6-202ENST00000527624 MRC2Q9UBG0 1479 aa26.55■■□□□ 1.84
PCDHA6-202ENST00000527624 ABCA5Q8WWZ7 1642 aa26.53■■□□□ 1.84
PCDHA6-202ENST00000527624 GAPVD1Q14C86 1478 aa26.52■■□□□ 1.84
PCDHA6-202ENST00000527624 CUL7Q14999 1698 aa26.52■■□□□ 1.84
PCDHA6-202ENST00000527624 TARBP1Q13395 1621 aaKnown RBP26.49■■□□□ 1.83
PCDHA6-202ENST00000527624 ZEB1P37275 1124 aaPredicted RBP26.48■■□□□ 1.83
PCDHA6-202ENST00000527624 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.38■■□□□ 1.81
PCDHA6-202ENST00000527624 ERCC6Q03468 1493 aa26.38■■□□□ 1.81
PCDHA6-202ENST00000527624 KANK4Q5T7N3 995 aaPredicted RBP26.37■■□□□ 1.81
PCDHA6-202ENST00000527624 P3H3Q8IVL6 736 aa26.37■■□□□ 1.81
PCDHA6-202ENST00000527624 WDR62O43379 1518 aa26.36■■□□□ 1.81
PCDHA6-202ENST00000527624 AQRO60306 1485 aaKnown RBP eCLIP26.36■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms