RNA–Protein interactions for RNA: ENST00000527389.2

ATM-211, Transcript of ATM serine/threonine kinase, humanhuman

TSL 4

Gene ATM, Length 401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-211ENST00000527389 AEBP2Q6ZN18 517 aaPredicted RBP30.38■■■□□ 2.45
ATM-211ENST00000527389 CHIC1Q5VXU3 224 aa29.71■■■□□ 2.35
ATM-211ENST00000527389 PHF23Q9BUL5 403 aaPredicted RBP26.11■■□□□ 1.77
ATM-211ENST00000527389 SENP3Q9H4L4 574 aaPredicted RBP25.79■■□□□ 1.72
ATM-211ENST00000527389 PLPPR3Q6T4P5 718 aa24.12■■□□□ 1.45
ATM-211ENST00000527389 FOXD1Q16676 465 aa23.91■■□□□ 1.42
ATM-211ENST00000527389 PPP6R1Q9UPN7 881 aa23.01■■□□□ 1.27
ATM-211ENST00000527389 ADRA2BP18089 450 aa22.96■■□□□ 1.27
ATM-211ENST00000527389 PIAS4Q8N2W9 510 aaPredicted RBP22.53■■□□□ 1.2
ATM-211ENST00000527389 MSH5O43196 834 aa22.07■■□□□ 1.12
ATM-211ENST00000527389 PPP4R3CPQ6ZMV5 832 aa21.24■□□□□ 0.99
ATM-211ENST00000527389 SCAF1Q9H7N4 1312 aaKnown RBP21.04■□□□□ 0.96
ATM-211ENST00000527389 MAPK8IP2Q13387 824 aaPredicted RBP20.82■□□□□ 0.92
ATM-211ENST00000527389 KCNA4P22459 653 aa20.75■□□□□ 0.91
ATM-211ENST00000527389 NCBP3Q53F19 620 aaKnown RBP20.69■□□□□ 0.9
ATM-211ENST00000527389 CNKSR2Q8WXI2 1034 aa20.66■□□□□ 0.9
ATM-211ENST00000527389 DMRT2Q9Y5R5 561 aa20.6■□□□□ 0.89
ATM-211ENST00000527389 NPM3O75607 178 aaKnown RBP20.39■□□□□ 0.85
ATM-211ENST00000527389 RNF216Q9NWF9 866 aaPredicted RBP20.27■□□□□ 0.84
ATM-211ENST00000527389 HOXD11P31277 338 aaPredicted RBP20.2■□□□□ 0.82
ATM-211ENST00000527389 POTEDQ86YR6 584 aa20.04■□□□□ 0.8
ATM-211ENST00000527389 DNAJC5BQ9UF47 199 aa19.93■□□□□ 0.78
ATM-211ENST00000527389 SLC4A1APQ9BWU0 796 aaKnown RBP19.75■□□□□ 0.75
ATM-211ENST00000527389 DCAF8L1A6NGE4 600 aa19.58■□□□□ 0.72
ATM-211ENST00000527389 SLC4A2P04920 1241 aa19.26■□□□□ 0.67
ATM-211ENST00000527389 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.16■□□□□ 0.66
ATM-211ENST00000527389 EHMT2Q96KQ7 1210 aa19.14■□□□□ 0.65
ATM-211ENST00000527389 FOXD4L1Q9NU39 408 aa19.12■□□□□ 0.65
ATM-211ENST00000527389 ZBTB22O15209 634 aa19.1■□□□□ 0.65
ATM-211ENST00000527389 CSRNP3Q8WYN3 585 aa19.01■□□□□ 0.63
ATM-211ENST00000527389 RNF39Q9H2S5 420 aa18.91■□□□□ 0.62
ATM-211ENST00000527389 U3KPZ7 1027 aaPredicted RBP18.91■□□□□ 0.62
ATM-211ENST00000527389 MYCNP04198 464 aaPredicted RBP18.86■□□□□ 0.61
ATM-211ENST00000527389 C1QBPQ07021 282 aaKnown RBP18.69■□□□□ 0.58
ATM-211ENST00000527389 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.67■□□□□ 0.58
ATM-211ENST00000527389 HNRNPUL2Q1KMD3 747 aaKnown RBP18.67■□□□□ 0.58
ATM-211ENST00000527389 SAMD1Q6SPF0 538 aaPredicted RBP18.6■□□□□ 0.57
ATM-211ENST00000527389 ATXN8OSP0DMR3 200 aa18.49■□□□□ 0.55
ATM-211ENST00000527389 APLP2Q06481 763 aa18.48■□□□□ 0.55
ATM-211ENST00000527389 CACNB1Q02641 598 aaPredicted RBP18.34■□□□□ 0.53
ATM-211ENST00000527389 SPINK5Q9NQ38 1064 aaPredicted RBP18.34■□□□□ 0.53
ATM-211ENST00000527389 ATF5Q9Y2D1 282 aaPredicted RBP18.31■□□□□ 0.52
ATM-211ENST00000527389 CAPN15O75808 1086 aa18.23■□□□□ 0.51
ATM-211ENST00000527389 ZNF219Q9P2Y4 722 aaPredicted RBP18.22■□□□□ 0.51
ATM-211ENST00000527389 TRHP20396 242 aaPredicted RBP18.14■□□□□ 0.49
ATM-211ENST00000527389 DSG3P32926 999 aa17.99■□□□□ 0.47
ATM-211ENST00000527389 ABCB7O75027 752 aa17.89■□□□□ 0.45
ATM-211ENST00000527389 POLA2Q14181 598 aa17.89■□□□□ 0.45
ATM-211ENST00000527389 ZBTB12Q9Y330 459 aaPredicted RBP17.64■□□□□ 0.41
ATM-211ENST00000527389 FBLN2P98095 1184 aa17.55■□□□□ 0.4
ATM-211ENST00000527389 MKRN4PQ13434 485 aaPredicted RBP17.54■□□□□ 0.4
ATM-211ENST00000527389 OSCARQ8IYS5 282 aa17.28■□□□□ 0.36
ATM-211ENST00000527389 SPDYE2BA6NHP3 402 aa17.17■□□□□ 0.34
ATM-211ENST00000527389 SPDYE6P0CI01 402 aa17.17■□□□□ 0.34
ATM-211ENST00000527389 SPDYE2Q495Y8 402 aa17.17■□□□□ 0.34
ATM-211ENST00000527389 RBM42Q9BTD8 480 aaKnown RBP17.15■□□□□ 0.34
ATM-211ENST00000527389 FKBP8Q14318 412 aa17.14■□□□□ 0.33
ATM-211ENST00000527389 SPDYE4A6NLX3 237 aa17.13■□□□□ 0.33
ATM-211ENST00000527389 SSUH2Q9Y2M2 353 aa17.06■□□□□ 0.32
ATM-211ENST00000527389 ZNF692Q9BU19 519 aaPredicted RBP17.04■□□□□ 0.32
ATM-211ENST00000527389 PROM2Q8N271 834 aa16.95■□□□□ 0.3
ATM-211ENST00000527389 AKT1S1Q96B36 256 aa16.95■□□□□ 0.3
ATM-211ENST00000527389 PABPN1Q86U42 306 aaKnown RBP eCLIP16.83■□□□□ 0.28
ATM-211ENST00000527389 REM2Q8IYK8 340 aaPredicted RBP16.75■□□□□ 0.27
ATM-211ENST00000527389 SPDYE1Q8NFV5 336 aaPredicted RBP16.64■□□□□ 0.25
ATM-211ENST00000527389 STAG3Q9UJ98 1225 aa16.59■□□□□ 0.25
ATM-211ENST00000527389 PITPNM1O00562 1244 aa16.57■□□□□ 0.24
ATM-211ENST00000527389 FBXO3Q9UK99 471 aa16.57■□□□□ 0.24
ATM-211ENST00000527389 CLEC11AQ9Y240 323 aa16.49■□□□□ 0.23
ATM-211ENST00000527389 CHRDL2Q6WN34 429 aa16.41■□□□□ 0.22
ATM-211ENST00000527389 PRR29P0C7W0 189 aa16.38■□□□□ 0.21
ATM-211ENST00000527389 VASPP50552 380 aaPredicted RBP16.34■□□□□ 0.21
ATM-211ENST00000527389 FXR2P51116 673 aaKnown RBP eCLIP16.29■□□□□ 0.29e-8■□□□□ 10.3
ATM-211ENST00000527389 CREBZFQ9NS37 354 aa16.22■□□□□ 0.19
ATM-211ENST00000527389 PIP4P2Q8N4L2 257 aa16.21■□□□□ 0.19
ATM-211ENST00000527389 MIER1Q8N108 512 aa16.2■□□□□ 0.18
ATM-211ENST00000527389 PLCD3Q8N3E9 789 aa16.19■□□□□ 0.18
ATM-211ENST00000527389 PLEKHG5O94827 1062 aa16.14■□□□□ 0.17
ATM-211ENST00000527389 PRKAR2AP13861 404 aaKnown RBP16.13■□□□□ 0.17
ATM-211ENST00000527389 CHADLQ6NUI6 762 aa16.11■□□□□ 0.17
ATM-211ENST00000527389 IFNLR1Q8IU57 520 aaPredicted RBP16.11■□□□□ 0.17
ATM-211ENST00000527389 MNX1P50219 401 aaPredicted RBP16.08■□□□□ 0.16
ATM-211ENST00000527389 ZBTB47Q9UFB7 747 aaPredicted RBP16.07■□□□□ 0.16
ATM-211ENST00000527389 FARP1Q9Y4F1 1045 aaPredicted RBP16■□□□□ 0.15
ATM-211ENST00000527389 KLHL34Q8N239 644 aa15.98■□□□□ 0.15
ATM-211ENST00000527389 NPM1P06748 294 aaKnown RBP eCLIP15.93■□□□□ 0.14
ATM-211ENST00000527389 SPOCK2Q92563 424 aa15.91■□□□□ 0.14
ATM-211ENST00000527389 POTEHQ6S545 545 aa15.87■□□□□ 0.13
ATM-211ENST00000527389 NUBP1P53384 320 aa15.86■□□□□ 0.13
ATM-211ENST00000527389 RASEFQ8IZ41 740 aa15.76■□□□□ 0.11
ATM-211ENST00000527389 C19orf67A6NJJ6 358 aa15.73■□□□□ 0.11
ATM-211ENST00000527389 FAM212AQ96EL1 285 aa15.71■□□□□ 0.11
ATM-211ENST00000527389 AMER1Q5JTC6 1135 aaPredicted RBP15.69■□□□□ 0.1
ATM-211ENST00000527389 CD44P16070 742 aaKnown RBP15.67■□□□□ 0.1
ATM-211ENST00000527389 GSE1Q14687 1217 aa15.67■□□□□ 0.1
ATM-211ENST00000527389 PAK3O75914 559 aaPredicted RBP15.64■□□□□ 0.09
ATM-211ENST00000527389 DCAF8Q5TAQ9 597 aa15.63■□□□□ 0.09
ATM-211ENST00000527389 HAX1O00165 279 aa15.62■□□□□ 0.09
ATM-211ENST00000527389 TSPYL2Q9H2G4 693 aaPredicted RBP15.62■□□□□ 0.09
ATM-211ENST00000527389 CIZ1Q9ULV3 898 aaPredicted RBP15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms