RNA–Protein interactions for RNA: ENST00000527004.5

FOXRED1-207, Transcript of FAD dependent oxidoreductase domain containing 1, humanhuman

TSL 5

Gene FOXRED1, Length 1,760 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1-207ENST00000527004 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.56■□□□□ 0.244e-49■■■■■ 168.5
FOXRED1-207ENST00000527004 FTOQ9C0B1 505 aaKnown RBP eCLIP18.4■□□□□ 0.542e-6■■■■■ 157.3
FOXRED1-207ENST00000527004 EIF4G2P78344 907 aaKnown RBP eCLIP22.4■■□□□ 1.186e-10■■■■■ 152.6
FOXRED1-207ENST00000527004 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.03■□□□□ 0.323e-7■■■■■ 142.8
FOXRED1-207ENST00000527004 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.66■□□□□ 0.16e-7■■■■■ 139.2
FOXRED1-207ENST00000527004 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.39■□□□□ 0.219e-10■■■■■ 113.6
FOXRED1-207ENST00000527004 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.25□□□□□ -0.133e-8■■■■■ 94.4
FOXRED1-207ENST00000527004 EWSR1Q01844 656 aaKnown RBP eCLIP13.2□□□□□ -0.31e-8■■■■■ 83.9
FOXRED1-207ENST00000527004 AARSP49588 968 aaKnown RBP eCLIP16.92■□□□□ 0.32e-12■■■■■ 67
FOXRED1-207ENST00000527004 RBFOX2O43251 390 aaKnown RBP eCLIP13.12□□□□□ -0.311e-15■■■■■ 63.4
FOXRED1-207ENST00000527004 PCBP2Q15366 365 aaKnown RBP eCLIP15.67■□□□□ 0.11e-8■■■■■ 60.5
FOXRED1-207ENST00000527004 GTF2F1P35269 517 aaKnown RBP eCLIP17.69■□□□□ 0.422e-18■■■■■ 58.6
FOXRED1-207ENST00000527004 SF3A3Q12874 501 aaKnown RBP eCLIP16.13■□□□□ 0.173e-8■■■■■ 54.4
FOXRED1-207ENST00000527004 SF3B1O75533 1304 aaKnown RBP eCLIP16.45■□□□□ 0.222e-7■■■■■ 53.5
FOXRED1-207ENST00000527004 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.7□□□□□ -0.062e-29■■■■■ 45.4
FOXRED1-207ENST00000527004 ZRANB2O95218 330 aaKnown RBP eCLIP17.16■□□□□ 0.341e-6■■■■■ 42
FOXRED1-207ENST00000527004 AQRO60306 1485 aaKnown RBP eCLIP24.13■■□□□ 1.452e-10■■■■■ 41.8
FOXRED1-207ENST00000527004 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.35■□□□□ 0.374e-12■■■■■ 39.7
FOXRED1-207ENST00000527004 TIA1P31483 386 aaKnown RBP eCLIP15.28■□□□□ 0.042e-12■■■■■ 39.6
FOXRED1-207ENST00000527004 PRPF4O43172 522 aaKnown RBP eCLIP16.36■□□□□ 0.213e-7■■■■■ 39
FOXRED1-207ENST00000527004 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.45■□□□□ 0.543e-6■■■■■ 37.5
FOXRED1-207ENST00000527004 SRSF1Q07955 248 aaKnown RBP eCLIP12.47□□□□□ -0.415e-10■■■■■ 36.9
FOXRED1-207ENST00000527004 DKC1O60832 514 aaKnown RBP eCLIP17.43■□□□□ 0.384e-12■■■■■ 36.8
FOXRED1-207ENST00000527004 DDX21Q9NR30 783 aaKnown RBP eCLIP19.7■□□□□ 0.743e-6■■■■■ 35.5
FOXRED1-207ENST00000527004 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.9■□□□□ 0.33e-8■■■■■ 33.8
FOXRED1-207ENST00000527004 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.16□□□□□ -0.464e-8■■■■■ 27.5
FOXRED1-207ENST00000527004 HNRNPMP52272 730 aaKnown RBP eCLIP22.73■■□□□ 1.235e-9■■■■■ 27.4
FOXRED1-207ENST00000527004 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.97■□□□□ 0.156e-9■■■■■ 26.8
FOXRED1-207ENST00000527004 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.91■□□□□ 0.621e-6■■■■□ 24.6
FOXRED1-207ENST00000527004 SF3B4Q15427 424 aaKnown RBP eCLIP13.76□□□□□ -0.214e-6■■■■□ 23.4
FOXRED1-207ENST00000527004 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.8□□□□□ -0.23e-6■■■■□ 23.2
FOXRED1-207ENST00000527004 AATFQ9NY61 560 aaKnown RBP eCLIP18.49■□□□□ 0.555e-6■■■■□ 23
FOXRED1-207ENST00000527004 FUSP35637 526 aaKnown RBP eCLIP9.85□□□□□ -0.831e-7■■■■□ 22.5
FOXRED1-207ENST00000527004 CDC40O60508 579 aaKnown RBP eCLIP14.47□□□□□ -0.091e-6■■■■□ 21.3
FOXRED1-207ENST00000527004 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.06■□□□□ 0.161e-6■■■■□ 21.1
FOXRED1-207ENST00000527004 SMNDC1O75940 238 aaKnown RBP eCLIP15.31■□□□□ 0.046e-8■■■□□ 19.1
FOXRED1-207ENST00000527004 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.29■■□□□ 1.161e-6■■■□□ 16.9
FOXRED1-207ENST00000527004 EFTUD2Q15029 972 aaKnown RBP eCLIP16.31■□□□□ 0.22e-10■■■□□ 16
FOXRED1-207ENST00000527004 METAP2P50579 478 aaKnown RBP eCLIP18.55■□□□□ 0.562e-9■■■□□ 15.4
FOXRED1-207ENST00000527004 SRSF9Q13242 221 aaKnown RBP eCLIP11.16□□□□□ -0.622e-8■■■□□ 15
FOXRED1-207ENST00000527004 NCBP2P52298 156 aaKnown RBP eCLIP15.01□□□□□ -0.011e-10■■■□□ 14.8
FOXRED1-207ENST00000527004 PPIGQ13427 754 aaKnown RBP eCLIP15.92■□□□□ 0.147e-7■■□□□ 13.5
FOXRED1-207ENST00000527004 YBX3P16989 372 aaKnown RBP eCLIP17.38■□□□□ 0.372e-6■■□□□ 13.3
FOXRED1-207ENST00000527004 SAFB2Q14151 953 aaKnown RBP eCLIP21.13■□□□□ 0.971e-7■■□□□ 13.2
FOXRED1-207ENST00000527004 RPS3P23396 243 aaKnown RBP eCLIP15.76■□□□□ 0.111e-6■■□□□ 12.2
FOXRED1-207ENST00000527004 DDX3XO00571 662 aaKnown RBP eCLIP17.19■□□□□ 0.349e-12■■□□□ 11.6
FOXRED1-207ENST00000527004 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.53■□□□□ 0.41e-7■■□□□ 11.5
FOXRED1-207ENST00000527004 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.02■□□□□ 0.311e-6■□□□□ 10.7
FOXRED1-207ENST00000527004 LSM11P83369 360 aaKnown RBP eCLIP14.72□□□□□ -0.051e-5■□□□□ 10.6
FOXRED1-207ENST00000527004 HNRNPUQ00839 825 aaKnown RBP eCLIP21.65■■□□□ 1.065e-6■□□□□ 10.2
FOXRED1-207ENST00000527004 U2AF2P26368 475 aaKnown RBP eCLIP18.4■□□□□ 0.542e-7■□□□□ 10
Retrieved 51 of 51 RNA–protein pairs in 10.1 ms