RNA–Protein interactions for RNA: ENST00000526539.2

SLC38A6-209, Transcript of solute carrier family 38 member 6, humanhuman

TSL 4

Gene SLC38A6, Length 755 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A6-209ENST00000526539 AEBP2Q6ZN18 517 aaPredicted RBP30.71■■■□□ 2.51
SLC38A6-209ENST00000526539 CHIC1Q5VXU3 224 aa29.79■■■□□ 2.36
SLC38A6-209ENST00000526539 PHF23Q9BUL5 403 aaPredicted RBP26.2■■□□□ 1.78
SLC38A6-209ENST00000526539 SENP3Q9H4L4 574 aaPredicted RBP26.06■■□□□ 1.76
SLC38A6-209ENST00000526539 FOXD1Q16676 465 aa24.22■■□□□ 1.47
SLC38A6-209ENST00000526539 PLPPR3Q6T4P5 718 aa24.09■■□□□ 1.45
SLC38A6-209ENST00000526539 PPP6R1Q9UPN7 881 aa23.17■■□□□ 1.3
SLC38A6-209ENST00000526539 ADRA2BP18089 450 aa23.13■■□□□ 1.29
SLC38A6-209ENST00000526539 PIAS4Q8N2W9 510 aaPredicted RBP22.79■■□□□ 1.24
SLC38A6-209ENST00000526539 MSH5O43196 834 aa22.39■■□□□ 1.17
SLC38A6-209ENST00000526539 PPP4R3CPQ6ZMV5 832 aa21.21■□□□□ 0.99
SLC38A6-209ENST00000526539 SCAF1Q9H7N4 1312 aaKnown RBP21.13■□□□□ 0.97
SLC38A6-209ENST00000526539 MAPK8IP2Q13387 824 aaPredicted RBP21.04■□□□□ 0.96
SLC38A6-209ENST00000526539 DMRT2Q9Y5R5 561 aa20.79■□□□□ 0.92
SLC38A6-209ENST00000526539 POTEDQ86YR6 584 aa20.74■□□□□ 0.91
SLC38A6-209ENST00000526539 CNKSR2Q8WXI2 1034 aa20.66■□□□□ 0.9
SLC38A6-209ENST00000526539 NCBP3Q53F19 620 aaKnown RBP20.58■□□□□ 0.89
SLC38A6-209ENST00000526539 KCNA4P22459 653 aa20.52■□□□□ 0.88
SLC38A6-209ENST00000526539 NPM3O75607 178 aaKnown RBP20.3■□□□□ 0.84
SLC38A6-209ENST00000526539 RNF216Q9NWF9 866 aaPredicted RBP20.3■□□□□ 0.84
SLC38A6-209ENST00000526539 HOXD11P31277 338 aaPredicted RBP20.28■□□□□ 0.84
SLC38A6-209ENST00000526539 DCAF8L1A6NGE4 600 aa19.86■□□□□ 0.77
SLC38A6-209ENST00000526539 DNAJC5BQ9UF47 199 aa19.76■□□□□ 0.75
SLC38A6-209ENST00000526539 SLC4A1APQ9BWU0 796 aaKnown RBP19.49■□□□□ 0.71
SLC38A6-209ENST00000526539 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.31■□□□□ 0.68
SLC38A6-209ENST00000526539 SLC4A2P04920 1241 aa19.24■□□□□ 0.67
SLC38A6-209ENST00000526539 RNF39Q9H2S5 420 aa19.2■□□□□ 0.66
SLC38A6-209ENST00000526539 U3KPZ7 1027 aaPredicted RBP19■□□□□ 0.63
SLC38A6-209ENST00000526539 C1QBPQ07021 282 aaKnown RBP18.94■□□□□ 0.62
SLC38A6-209ENST00000526539 FOXD4L1Q9NU39 408 aa18.92■□□□□ 0.62
SLC38A6-209ENST00000526539 ZBTB22O15209 634 aa18.9■□□□□ 0.62
SLC38A6-209ENST00000526539 CACNB1Q02641 598 aaPredicted RBP18.8■□□□□ 0.6
SLC38A6-209ENST00000526539 MYCNP04198 464 aaPredicted RBP18.76■□□□□ 0.59
SLC38A6-209ENST00000526539 EHMT2Q96KQ7 1210 aa18.7■□□□□ 0.58
SLC38A6-209ENST00000526539 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.66■□□□□ 0.58
SLC38A6-209ENST00000526539 HNRNPUL2Q1KMD3 747 aaKnown RBP18.66■□□□□ 0.58
SLC38A6-209ENST00000526539 CSRNP3Q8WYN3 585 aa18.61■□□□□ 0.57
SLC38A6-209ENST00000526539 SAMD1Q6SPF0 538 aaPredicted RBP18.6■□□□□ 0.57
SLC38A6-209ENST00000526539 SPINK5Q9NQ38 1064 aaPredicted RBP18.52■□□□□ 0.56
SLC38A6-209ENST00000526539 APLP2Q06481 763 aa18.5■□□□□ 0.55
SLC38A6-209ENST00000526539 CAPN15O75808 1086 aa18.43■□□□□ 0.54
SLC38A6-209ENST00000526539 TRHP20396 242 aaPredicted RBP18.3■□□□□ 0.52
SLC38A6-209ENST00000526539 ATXN8OSP0DMR3 200 aa18.29■□□□□ 0.52
SLC38A6-209ENST00000526539 ZNF219Q9P2Y4 722 aaPredicted RBP18.29■□□□□ 0.52
SLC38A6-209ENST00000526539 ATF5Q9Y2D1 282 aaPredicted RBP18.29■□□□□ 0.52
SLC38A6-209ENST00000526539 DSG3P32926 999 aa18.19■□□□□ 0.5
SLC38A6-209ENST00000526539 ABCB7O75027 752 aa18.08■□□□□ 0.48
SLC38A6-209ENST00000526539 POLA2Q14181 598 aa17.98■□□□□ 0.47
SLC38A6-209ENST00000526539 ZBTB12Q9Y330 459 aaPredicted RBP17.65■□□□□ 0.42
SLC38A6-209ENST00000526539 FBLN2P98095 1184 aa17.5■□□□□ 0.39
SLC38A6-209ENST00000526539 MKRN4PQ13434 485 aaPredicted RBP17.49■□□□□ 0.39
SLC38A6-209ENST00000526539 OSCARQ8IYS5 282 aa17.37■□□□□ 0.37
SLC38A6-209ENST00000526539 RBM42Q9BTD8 480 aaKnown RBP17.32■□□□□ 0.36
SLC38A6-209ENST00000526539 SPDYE2BA6NHP3 402 aa17.17■□□□□ 0.34
SLC38A6-209ENST00000526539 SPDYE6P0CI01 402 aa17.17■□□□□ 0.34
SLC38A6-209ENST00000526539 SPDYE2Q495Y8 402 aa17.17■□□□□ 0.34
SLC38A6-209ENST00000526539 AKT1S1Q96B36 256 aa17.08■□□□□ 0.32
SLC38A6-209ENST00000526539 ZNF692Q9BU19 519 aaPredicted RBP17.07■□□□□ 0.32
SLC38A6-209ENST00000526539 SSUH2Q9Y2M2 353 aa17.03■□□□□ 0.32
SLC38A6-209ENST00000526539 SPDYE4A6NLX3 237 aa16.98■□□□□ 0.31
SLC38A6-209ENST00000526539 REM2Q8IYK8 340 aaPredicted RBP16.92■□□□□ 0.3
SLC38A6-209ENST00000526539 PABPN1Q86U42 306 aaKnown RBP eCLIP16.84■□□□□ 0.29
SLC38A6-209ENST00000526539 FKBP8Q14318 412 aa16.82■□□□□ 0.28
SLC38A6-209ENST00000526539 PITPNM1O00562 1244 aa16.73■□□□□ 0.27
SLC38A6-209ENST00000526539 PROM2Q8N271 834 aa16.71■□□□□ 0.27
SLC38A6-209ENST00000526539 SPDYE1Q8NFV5 336 aaPredicted RBP16.71■□□□□ 0.27
SLC38A6-209ENST00000526539 CHRDL2Q6WN34 429 aa16.69■□□□□ 0.26
SLC38A6-209ENST00000526539 CLEC11AQ9Y240 323 aa16.62■□□□□ 0.25
SLC38A6-209ENST00000526539 STAG3Q9UJ98 1225 aa16.51■□□□□ 0.23
SLC38A6-209ENST00000526539 PRR29P0C7W0 189 aa16.46■□□□□ 0.23
SLC38A6-209ENST00000526539 FXR2P51116 673 aaKnown RBP eCLIP16.45■□□□□ 0.22
SLC38A6-209ENST00000526539 PIP4P2Q8N4L2 257 aa16.45■□□□□ 0.22
SLC38A6-209ENST00000526539 POTEHQ6S545 545 aa16.37■□□□□ 0.21
SLC38A6-209ENST00000526539 PRKAR2AP13861 404 aaKnown RBP16.3■□□□□ 0.2
SLC38A6-209ENST00000526539 FBXO3Q9UK99 471 aa16.27■□□□□ 0.2
SLC38A6-209ENST00000526539 CHADLQ6NUI6 762 aa16.25■□□□□ 0.19
SLC38A6-209ENST00000526539 NISCHQ9Y2I1 1504 aa16.24■□□□□ 0.19
SLC38A6-209ENST00000526539 CREBZFQ9NS37 354 aa16.23■□□□□ 0.19
SLC38A6-209ENST00000526539 MIER1Q8N108 512 aa16.11■□□□□ 0.17
SLC38A6-209ENST00000526539 FARP1Q9Y4F1 1045 aaPredicted RBP16.09■□□□□ 0.17
SLC38A6-209ENST00000526539 VASPP50552 380 aaPredicted RBP16.07■□□□□ 0.16
SLC38A6-209ENST00000526539 PLCD3Q8N3E9 789 aa16.06■□□□□ 0.16
SLC38A6-209ENST00000526539 MNX1P50219 401 aaPredicted RBP16.05■□□□□ 0.16
SLC38A6-209ENST00000526539 PLEKHG5O94827 1062 aa16.03■□□□□ 0.16
SLC38A6-209ENST00000526539 HAX1O00165 279 aa15.94■□□□□ 0.14
SLC38A6-209ENST00000526539 NPM1P06748 294 aaKnown RBP eCLIP15.92■□□□□ 0.14
SLC38A6-209ENST00000526539 C19orf67A6NJJ6 358 aa15.9■□□□□ 0.14
SLC38A6-209ENST00000526539 ZBTB47Q9UFB7 747 aaPredicted RBP15.9■□□□□ 0.14
SLC38A6-209ENST00000526539 IFNLR1Q8IU57 520 aaPredicted RBP15.84■□□□□ 0.13
SLC38A6-209ENST00000526539 EVX2Q03828 476 aa15.83■□□□□ 0.12
SLC38A6-209ENST00000526539 CD44P16070 742 aaKnown RBP15.82■□□□□ 0.12
SLC38A6-209ENST00000526539 KLHL34Q8N239 644 aa15.81■□□□□ 0.12
SLC38A6-209ENST00000526539 NUBP1P53384 320 aa15.75■□□□□ 0.11
SLC38A6-209ENST00000526539 RASEFQ8IZ41 740 aa15.73■□□□□ 0.11
SLC38A6-209ENST00000526539 PAK3O75914 559 aaPredicted RBP15.7■□□□□ 0.1
SLC38A6-209ENST00000526539 ZRANB1Q9UGI0 708 aa15.7■□□□□ 0.1
SLC38A6-209ENST00000526539 SP7Q8TDD2 431 aaPredicted RBP15.67■□□□□ 0.1
SLC38A6-209ENST00000526539 SPOCK2Q92563 424 aa15.67■□□□□ 0.1
SLC38A6-209ENST00000526539 TSPYL2Q9H2G4 693 aaPredicted RBP15.67■□□□□ 0.1
SLC38A6-209ENST00000526539 ZNF579Q8NAF0 562 aaKnown RBP15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms