RNA–Protein interactions for RNA: ENST00000525666.1

AP003041.2-201, humanhuman

BASIC

Gene AP003041.2, Length 1,180 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003041.2-201ENST00000525666 AEBP2Q6ZN18 517 aaPredicted RBP34.48■■■■□ 3.11
AP003041.2-201ENST00000525666 CHIC1Q5VXU3 224 aa33.21■■■□□ 2.91
AP003041.2-201ENST00000525666 SENP3Q9H4L4 574 aaPredicted RBP29.24■■■□□ 2.27
AP003041.2-201ENST00000525666 PHF23Q9BUL5 403 aaPredicted RBP29.2■■■□□ 2.26
AP003041.2-201ENST00000525666 FOXD1Q16676 465 aa27.24■■□□□ 1.95
AP003041.2-201ENST00000525666 PLPPR3Q6T4P5 718 aa26.71■■□□□ 1.87
AP003041.2-201ENST00000525666 PPP6R1Q9UPN7 881 aa25.88■■□□□ 1.73
AP003041.2-201ENST00000525666 ADRA2BP18089 450 aa25.75■■□□□ 1.71
AP003041.2-201ENST00000525666 PIAS4Q8N2W9 510 aaPredicted RBP25.48■■□□□ 1.67
AP003041.2-201ENST00000525666 MSH5O43196 834 aa25.24■■□□□ 1.63
AP003041.2-201ENST00000525666 POTEDQ86YR6 584 aa23.79■■□□□ 1.4
AP003041.2-201ENST00000525666 MAPK8IP2Q13387 824 aaPredicted RBP23.51■■□□□ 1.35
AP003041.2-201ENST00000525666 SCAF1Q9H7N4 1312 aaKnown RBP23.51■■□□□ 1.35
AP003041.2-201ENST00000525666 PPP4R3CPQ6ZMV5 832 aa23.47■■□□□ 1.35
AP003041.2-201ENST00000525666 DMRT2Q9Y5R5 561 aa23.32■■□□□ 1.32
AP003041.2-201ENST00000525666 CNKSR2Q8WXI2 1034 aa22.93■■□□□ 1.26
AP003041.2-201ENST00000525666 HOXD11P31277 338 aaPredicted RBP22.71■■□□□ 1.23
AP003041.2-201ENST00000525666 NCBP3Q53F19 620 aaKnown RBP22.66■■□□□ 1.22
AP003041.2-201ENST00000525666 RNF216Q9NWF9 866 aaPredicted RBP22.63■■□□□ 1.21
AP003041.2-201ENST00000525666 KCNA4P22459 653 aa22.45■■□□□ 1.18
AP003041.2-201ENST00000525666 NPM3O75607 178 aaKnown RBP22.44■■□□□ 1.18
AP003041.2-201ENST00000525666 NISCHQ9Y2I1 1504 aa22.16■■□□□ 1.14
AP003041.2-201ENST00000525666 DCAF8L1A6NGE4 600 aa22.08■■□□□ 1.13
AP003041.2-201ENST00000525666 DNAJC5BQ9UF47 199 aa22.06■■□□□ 1.12
AP003041.2-201ENST00000525666 RNF39Q9H2S5 420 aa21.65■■□□□ 1.06
AP003041.2-201ENST00000525666 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.43■■□□□ 1.02
AP003041.2-201ENST00000525666 SLC4A2P04920 1241 aa21.35■■□□□ 1.01
AP003041.2-201ENST00000525666 C1QBPQ07021 282 aaKnown RBP21.32■■□□□ 1
AP003041.2-201ENST00000525666 CACNB1Q02641 598 aaPredicted RBP21.25■□□□□ 0.99
AP003041.2-201ENST00000525666 SLC4A1APQ9BWU0 796 aaKnown RBP21.23■□□□□ 0.99
AP003041.2-201ENST00000525666 U3KPZ7 1027 aaPredicted RBP21.2■□□□□ 0.98
AP003041.2-201ENST00000525666 ABCC9O60706 1549 aa20.88■□□□□ 0.93
AP003041.2-201ENST00000525666 FOXD4L1Q9NU39 408 aa20.77■□□□□ 0.92
AP003041.2-201ENST00000525666 ZBTB22O15209 634 aa20.72■□□□□ 0.91
AP003041.2-201ENST00000525666 MYCNP04198 464 aaPredicted RBP20.7■□□□□ 0.9
AP003041.2-201ENST00000525666 SPINK5Q9NQ38 1064 aaPredicted RBP20.69■□□□□ 0.9
AP003041.2-201ENST00000525666 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.68■□□□□ 0.9
AP003041.2-201ENST00000525666 HNRNPUL2Q1KMD3 747 aaKnown RBP20.68■□□□□ 0.9
AP003041.2-201ENST00000525666 SAMD1Q6SPF0 538 aaPredicted RBP20.6■□□□□ 0.89
AP003041.2-201ENST00000525666 APLP2Q06481 763 aa20.53■□□□□ 0.88
AP003041.2-201ENST00000525666 CAPN15O75808 1086 aa20.51■□□□□ 0.87
AP003041.2-201ENST00000525666 DSG3P32926 999 aa20.43■□□□□ 0.86
AP003041.2-201ENST00000525666 ZNF219Q9P2Y4 722 aaPredicted RBP20.38■□□□□ 0.85
AP003041.2-201ENST00000525666 TRHP20396 242 aaPredicted RBP20.31■□□□□ 0.84
AP003041.2-201ENST00000525666 ATF5Q9Y2D1 282 aaPredicted RBP20.23■□□□□ 0.83
AP003041.2-201ENST00000525666 CSRNP3Q8WYN3 585 aa20.19■□□□□ 0.82
AP003041.2-201ENST00000525666 ATXN8OSP0DMR3 200 aa20.13■□□□□ 0.81
AP003041.2-201ENST00000525666 ABCB7O75027 752 aa20.11■□□□□ 0.81
AP003041.2-201ENST00000525666 EHMT2Q96KQ7 1210 aa20.04■□□□□ 0.8
AP003041.2-201ENST00000525666 CCDC180Q9P1Z9 1646 aa20.03■□□□□ 0.8
AP003041.2-201ENST00000525666 POLA2Q14181 598 aa19.95■□□□□ 0.78
AP003041.2-201ENST00000525666 ZBTB12Q9Y330 459 aaPredicted RBP19.59■□□□□ 0.73
AP003041.2-201ENST00000525666 RB1CC1Q8TDY2 1594 aa19.49■□□□□ 0.71
AP003041.2-201ENST00000525666 PABPN1Q86U42 306 aaKnown RBP eCLIP19.44■□□□□ 0.7
AP003041.2-201ENST00000525666 RBM42Q9BTD8 480 aaKnown RBP19.4■□□□□ 0.7
AP003041.2-201ENST00000525666 MKRN4PQ13434 485 aaPredicted RBP19.36■□□□□ 0.69
AP003041.2-201ENST00000525666 OSCARQ8IYS5 282 aa19.3■□□□□ 0.68
AP003041.2-201ENST00000525666 DCAF8L2P0C7V8 631 aa19.29■□□□□ 0.68
AP003041.2-201ENST00000525666 FBLN2P98095 1184 aa19.27■□□□□ 0.68
AP003041.2-201ENST00000525666 NACADO15069 1562 aa19.19■□□□□ 0.66
AP003041.2-201ENST00000525666 AKT1S1Q96B36 256 aa19.1■□□□□ 0.65
AP003041.2-201ENST00000525666 SPDYE2BA6NHP3 402 aa19.07■□□□□ 0.64
AP003041.2-201ENST00000525666 SPDYE6P0CI01 402 aa19.07■□□□□ 0.64
AP003041.2-201ENST00000525666 SPDYE2Q495Y8 402 aa19.07■□□□□ 0.64
AP003041.2-201ENST00000525666 DNAJC5Q9H3Z4 198 aa19.03■□□□□ 0.64
AP003041.2-201ENST00000525666 SSUH2Q9Y2M2 353 aa18.95■□□□□ 0.62
AP003041.2-201ENST00000525666 UNC13AQ9UPW8 1703 aa18.92■□□□□ 0.62
AP003041.2-201ENST00000525666 REM2Q8IYK8 340 aaPredicted RBP18.92■□□□□ 0.62
AP003041.2-201ENST00000525666 BICRAQ9NZM4 1560 aa18.91■□□□□ 0.62
AP003041.2-201ENST00000525666 CECR2Q9BXF3 1484 aa18.86■□□□□ 0.61
AP003041.2-201ENST00000525666 ZNF692Q9BU19 519 aaPredicted RBP18.84■□□□□ 0.61
AP003041.2-201ENST00000525666 CHRDL2Q6WN34 429 aa18.79■□□□□ 0.6
AP003041.2-201ENST00000525666 CC2D2AQ9P2K1 1620 aa18.74■□□□□ 0.59
AP003041.2-201ENST00000525666 PITPNM1O00562 1244 aa18.72■□□□□ 0.59
AP003041.2-201ENST00000525666 POTEHQ6S545 545 aa18.71■□□□□ 0.59
AP003041.2-201ENST00000525666 MYO15BQ96JP2 1530 aa18.66■□□□□ 0.58
AP003041.2-201ENST00000525666 SPDYE4A6NLX3 237 aa18.6■□□□□ 0.57
AP003041.2-201ENST00000525666 SPDYE1Q8NFV5 336 aaPredicted RBP18.56■□□□□ 0.56
AP003041.2-201ENST00000525666 SHROOM4Q9ULL8 1493 aa18.55■□□□□ 0.56
AP003041.2-201ENST00000525666 EIF4G1Q04637 1599 aaKnown RBP18.53■□□□□ 0.56
AP003041.2-201ENST00000525666 FXR2P51116 673 aaKnown RBP eCLIP18.5■□□□□ 0.55
AP003041.2-201ENST00000525666 PIP4P2Q8N4L2 257 aa18.48■□□□□ 0.55
AP003041.2-201ENST00000525666 PROM2Q8N271 834 aa18.43■□□□□ 0.54
AP003041.2-201ENST00000525666 CLEC11AQ9Y240 323 aa18.4■□□□□ 0.54
AP003041.2-201ENST00000525666 SCRIBQ14160 1630 aa18.34■□□□□ 0.53
AP003041.2-201ENST00000525666 PRR29P0C7W0 189 aa18.22■□□□□ 0.51
AP003041.2-201ENST00000525666 STAG3Q9UJ98 1225 aa18.2■□□□□ 0.5
AP003041.2-201ENST00000525666 ZCCHC6Q5VYS8 1495 aaKnown RBP18.19■□□□□ 0.5
AP003041.2-201ENST00000525666 DCAF1Q9Y4B6 1507 aa18.18■□□□□ 0.5
AP003041.2-201ENST00000525666 PRKAR2AP13861 404 aaKnown RBP18.18■□□□□ 0.5
AP003041.2-201ENST00000525666 CUX2O14529 1486 aa18.18■□□□□ 0.5
AP003041.2-201ENST00000525666 FKBP8Q14318 412 aa18.16■□□□□ 0.5
AP003041.2-201ENST00000525666 ERCC6Q03468 1493 aa18.09■□□□□ 0.49
AP003041.2-201ENST00000525666 CHADLQ6NUI6 762 aa18.08■□□□□ 0.48
AP003041.2-201ENST00000525666 TRIM41Q8WV44 630 aa18.03■□□□□ 0.48
AP003041.2-201ENST00000525666 CREBZFQ9NS37 354 aa18.01■□□□□ 0.47
AP003041.2-201ENST00000525666 FARP1Q9Y4F1 1045 aaPredicted RBP17.91■□□□□ 0.46
AP003041.2-201ENST00000525666 HAX1O00165 279 aa17.89■□□□□ 0.45
AP003041.2-201ENST00000525666 C19orf67A6NJJ6 358 aa17.88■□□□□ 0.45
AP003041.2-201ENST00000525666 EVX2Q03828 476 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms