RNA–Protein interactions for RNA: ENST00000524047.5

LINCR-0001-203, humanhuman

TSL 4 BASIC

Gene LINCR-0001, Length 545 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCR-0001-203ENST00000524047 AEBP2Q6ZN18 517 aaPredicted RBP21.07■□□□□ 0.96
LINCR-0001-203ENST00000524047 CHIC1Q5VXU3 224 aa20.14■□□□□ 0.81
LINCR-0001-203ENST00000524047 SENP3Q9H4L4 574 aaPredicted RBP17.99■□□□□ 0.47
LINCR-0001-203ENST00000524047 PHF23Q9BUL5 403 aaPredicted RBP17.75■□□□□ 0.43
LINCR-0001-203ENST00000524047 FOXD1Q16676 465 aa16.73■□□□□ 0.27
LINCR-0001-203ENST00000524047 PLPPR3Q6T4P5 718 aa16.15■□□□□ 0.18
LINCR-0001-203ENST00000524047 PPP6R1Q9UPN7 881 aa15.72■□□□□ 0.11
LINCR-0001-203ENST00000524047 ADRA2BP18089 450 aa15.66■□□□□ 0.1
LINCR-0001-203ENST00000524047 PIAS4Q8N2W9 510 aaPredicted RBP15.65■□□□□ 0.1
LINCR-0001-203ENST00000524047 MSH5O43196 834 aa15.64■□□□□ 0.09
LINCR-0001-203ENST00000524047 POTEDQ86YR6 584 aa15.05■□□□□ -0
LINCR-0001-203ENST00000524047 SCAF1Q9H7N4 1312 aaKnown RBP14.39□□□□□ -0.11
LINCR-0001-203ENST00000524047 MAPK8IP2Q13387 824 aaPredicted RBP14.35□□□□□ -0.11
LINCR-0001-203ENST00000524047 DMRT2Q9Y5R5 561 aa14.28□□□□□ -0.12
LINCR-0001-203ENST00000524047 PPP4R3CPQ6ZMV5 832 aa14.16□□□□□ -0.14
LINCR-0001-203ENST00000524047 CNKSR2Q8WXI2 1034 aa13.88□□□□□ -0.19
LINCR-0001-203ENST00000524047 HOXD11P31277 338 aaPredicted RBP13.82□□□□□ -0.2
LINCR-0001-203ENST00000524047 RNF216Q9NWF9 866 aaPredicted RBP13.74□□□□□ -0.21
LINCR-0001-203ENST00000524047 NCBP3Q53F19 620 aaKnown RBP13.66□□□□□ -0.22
LINCR-0001-203ENST00000524047 DCAF8L1A6NGE4 600 aa13.63□□□□□ -0.23
LINCR-0001-203ENST00000524047 NPM3O75607 178 aaKnown RBP13.44□□□□□ -0.26
LINCR-0001-203ENST00000524047 DNAJC5BQ9UF47 199 aa13.37□□□□□ -0.27
LINCR-0001-203ENST00000524047 RNF39Q9H2S5 420 aa13.35□□□□□ -0.27
LINCR-0001-203ENST00000524047 CACNB1Q02641 598 aaPredicted RBP13.32□□□□□ -0.28
LINCR-0001-203ENST00000524047 KCNA4P22459 653 aa13.27□□□□□ -0.29
LINCR-0001-203ENST00000524047 C1QBPQ07021 282 aaKnown RBP13.18□□□□□ -0.3
LINCR-0001-203ENST00000524047 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.12□□□□□ -0.31
LINCR-0001-203ENST00000524047 U3KPZ7 1027 aaPredicted RBP12.87□□□□□ -0.35
LINCR-0001-203ENST00000524047 SLC4A2P04920 1241 aa12.81□□□□□ -0.36
LINCR-0001-203ENST00000524047 SPINK5Q9NQ38 1064 aaPredicted RBP12.63□□□□□ -0.39
LINCR-0001-203ENST00000524047 CAPN15O75808 1086 aa12.6□□□□□ -0.39
LINCR-0001-203ENST00000524047 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.58□□□□□ -0.4
LINCR-0001-203ENST00000524047 HNRNPUL2Q1KMD3 747 aaKnown RBP12.58□□□□□ -0.4
LINCR-0001-203ENST00000524047 APLP2Q06481 763 aa12.56□□□□□ -0.4
LINCR-0001-203ENST00000524047 SLC4A1APQ9BWU0 796 aaKnown RBP12.56□□□□□ -0.4
LINCR-0001-203ENST00000524047 DSG3P32926 999 aa12.53□□□□□ -0.4
LINCR-0001-203ENST00000524047 SAMD1Q6SPF0 538 aaPredicted RBP12.5□□□□□ -0.41
LINCR-0001-203ENST00000524047 MYCNP04198 464 aaPredicted RBP12.45□□□□□ -0.42
LINCR-0001-203ENST00000524047 ZNF219Q9P2Y4 722 aaPredicted RBP12.45□□□□□ -0.42
LINCR-0001-203ENST00000524047 TRHP20396 242 aaPredicted RBP12.42□□□□□ -0.42
LINCR-0001-203ENST00000524047 FOXD4L1Q9NU39 408 aa12.37□□□□□ -0.43
LINCR-0001-203ENST00000524047 ABCB7O75027 752 aa12.3□□□□□ -0.44
LINCR-0001-203ENST00000524047 ZBTB22O15209 634 aa12.2□□□□□ -0.46
LINCR-0001-203ENST00000524047 POLA2Q14181 598 aa12.13□□□□□ -0.47
LINCR-0001-203ENST00000524047 ATF5Q9Y2D1 282 aaPredicted RBP12.12□□□□□ -0.47
LINCR-0001-203ENST00000524047 ATXN8OSP0DMR3 200 aa12.02□□□□□ -0.49
LINCR-0001-203ENST00000524047 RBM42Q9BTD8 480 aaKnown RBP11.97□□□□□ -0.49
LINCR-0001-203ENST00000524047 ZBTB12Q9Y330 459 aaPredicted RBP11.93□□□□□ -0.5
LINCR-0001-203ENST00000524047 POTEHQ6S545 545 aa11.82□□□□□ -0.52
LINCR-0001-203ENST00000524047 CSRNP3Q8WYN3 585 aa11.75□□□□□ -0.53
LINCR-0001-203ENST00000524047 OSCARQ8IYS5 282 aa11.73□□□□□ -0.53
LINCR-0001-203ENST00000524047 AKT1S1Q96B36 256 aa11.72□□□□□ -0.53
LINCR-0001-203ENST00000524047 FBLN2P98095 1184 aa11.66□□□□□ -0.54
LINCR-0001-203ENST00000524047 CHRDL2Q6WN34 429 aa11.65□□□□□ -0.54
LINCR-0001-203ENST00000524047 EHMT2Q96KQ7 1210 aa11.61□□□□□ -0.55
LINCR-0001-203ENST00000524047 REM2Q8IYK8 340 aaPredicted RBP11.59□□□□□ -0.55
LINCR-0001-203ENST00000524047 MKRN4PQ13434 485 aaPredicted RBP11.58□□□□□ -0.56
LINCR-0001-203ENST00000524047 SPDYE2BA6NHP3 402 aa11.57□□□□□ -0.56
LINCR-0001-203ENST00000524047 SPDYE6P0CI01 402 aa11.57□□□□□ -0.56
LINCR-0001-203ENST00000524047 SPDYE2Q495Y8 402 aa11.57□□□□□ -0.56
LINCR-0001-203ENST00000524047 PITPNM1O00562 1244 aa11.45□□□□□ -0.58
LINCR-0001-203ENST00000524047 ZNF692Q9BU19 519 aaPredicted RBP11.42□□□□□ -0.58
LINCR-0001-203ENST00000524047 SSUH2Q9Y2M2 353 aa11.42□□□□□ -0.58
LINCR-0001-203ENST00000524047 PIP4P2Q8N4L2 257 aa11.39□□□□□ -0.59
LINCR-0001-203ENST00000524047 FXR2P51116 673 aaKnown RBP eCLIP11.36□□□□□ -0.59
LINCR-0001-203ENST00000524047 SPDYE1Q8NFV5 336 aaPredicted RBP11.33□□□□□ -0.6
LINCR-0001-203ENST00000524047 CLEC11AQ9Y240 323 aa11.26□□□□□ -0.61
LINCR-0001-203ENST00000524047 PABPN1Q86U42 306 aaKnown RBP eCLIP11.25□□□□□ -0.61
LINCR-0001-203ENST00000524047 PRKAR2AP13861 404 aaKnown RBP11.15□□□□□ -0.62
LINCR-0001-203ENST00000524047 HAX1O00165 279 aa11.14□□□□□ -0.63
LINCR-0001-203ENST00000524047 SP7Q8TDD2 431 aaPredicted RBP11.14□□□□□ -0.63
LINCR-0001-203ENST00000524047 PRR29P0C7W0 189 aa11.12□□□□□ -0.63
LINCR-0001-203ENST00000524047 SPDYE4A6NLX3 237 aa11.09□□□□□ -0.63
LINCR-0001-203ENST00000524047 CHADLQ6NUI6 762 aa11.03□□□□□ -0.64
LINCR-0001-203ENST00000524047 STAG3Q9UJ98 1225 aa11.01□□□□□ -0.65
LINCR-0001-203ENST00000524047 EVX2Q03828 476 aa11□□□□□ -0.65
LINCR-0001-203ENST00000524047 C19orf67A6NJJ6 358 aa10.99□□□□□ -0.65
LINCR-0001-203ENST00000524047 FARP1Q9Y4F1 1045 aaPredicted RBP10.92□□□□□ -0.66
LINCR-0001-203ENST00000524047 PROM2Q8N271 834 aa10.88□□□□□ -0.67
LINCR-0001-203ENST00000524047 CREBZFQ9NS37 354 aa10.87□□□□□ -0.67
LINCR-0001-203ENST00000524047 CD44P16070 742 aaKnown RBP10.81□□□□□ -0.68
LINCR-0001-203ENST00000524047 GABBR2O75899 941 aa10.79□□□□□ -0.68
LINCR-0001-203ENST00000524047 CLCN6P51797 869 aa10.72□□□□□ -0.69
LINCR-0001-203ENST00000524047 MNX1P50219 401 aaPredicted RBP10.71□□□□□ -0.69
LINCR-0001-203ENST00000524047 NPM1P06748 294 aaKnown RBP eCLIP10.69□□□□□ -0.7
LINCR-0001-203ENST00000524047 ZNF579Q8NAF0 562 aaKnown RBP10.67□□□□□ -0.7
LINCR-0001-203ENST00000524047 ZRANB1Q9UGI0 708 aa10.67□□□□□ -0.7
LINCR-0001-203ENST00000524047 FKBP8Q14318 412 aa10.63□□□□□ -0.71
LINCR-0001-203ENST00000524047 PAK3O75914 559 aaPredicted RBP10.62□□□□□ -0.71
LINCR-0001-203ENST00000524047 PLEKHG5O94827 1062 aa10.57□□□□□ -0.72
LINCR-0001-203ENST00000524047 MIER1Q8N108 512 aa10.56□□□□□ -0.72
LINCR-0001-203ENST00000524047 POTEIP0CG38 1075 aa10.54□□□□□ -0.72
LINCR-0001-203ENST00000524047 DCBLD2Q96PD2 775 aa10.51□□□□□ -0.73
LINCR-0001-203ENST00000524047 PHF12Q96QT6 1004 aa10.51□□□□□ -0.73
LINCR-0001-203ENST00000524047 GALR2O43603 387 aaPredicted RBP10.5□□□□□ -0.73
LINCR-0001-203ENST00000524047 PLCD3Q8N3E9 789 aa10.49□□□□□ -0.73
LINCR-0001-203ENST00000524047 TSPYL2Q9H2G4 693 aaPredicted RBP10.46□□□□□ -0.73
LINCR-0001-203ENST00000524047 ZBTB47Q9UFB7 747 aaPredicted RBP10.45□□□□□ -0.74
LINCR-0001-203ENST00000524047 CCDC61Q9Y6R9 512 aa10.45□□□□□ -0.74
LINCR-0001-203ENST00000524047 LHX8Q68G74 356 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms