RNA–Protein interactions for RNA: ENST00000523746.5

PTK2-250, Transcript of protein tyrosine kinase 2, humanhuman

TSL 4

Gene PTK2, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK2-250ENST00000523746 AEBP2Q6ZN18 517 aaPredicted RBP21.84■■□□□ 1.09
PTK2-250ENST00000523746 CHIC1Q5VXU3 224 aa21.7■■□□□ 1.06
PTK2-250ENST00000523746 PHF23Q9BUL5 403 aaPredicted RBP19.14■□□□□ 0.65
PTK2-250ENST00000523746 SENP3Q9H4L4 574 aaPredicted RBP18.44■□□□□ 0.54
PTK2-250ENST00000523746 PLPPR3Q6T4P5 718 aa17.76■□□□□ 0.43
PTK2-250ENST00000523746 FOXD1Q16676 465 aa17.07■□□□□ 0.32
PTK2-250ENST00000523746 PPP6R1Q9UPN7 881 aa16.74■□□□□ 0.27
PTK2-250ENST00000523746 ADRA2BP18089 450 aa16.7■□□□□ 0.26
PTK2-250ENST00000523746 PIAS4Q8N2W9 510 aaPredicted RBP16.14■□□□□ 0.17
PTK2-250ENST00000523746 KCNA4P22459 653 aa15.77■□□□□ 0.12
PTK2-250ENST00000523746 PPP4R3CPQ6ZMV5 832 aa15.69■□□□□ 0.1
PTK2-250ENST00000523746 MSH5O43196 834 aa15.58■□□□□ 0.08
PTK2-250ENST00000523746 NCBP3Q53F19 620 aaKnown RBP15.36■□□□□ 0.05
PTK2-250ENST00000523746 SCAF1Q9H7N4 1312 aaKnown RBP15.25■□□□□ 0.03
PTK2-250ENST00000523746 NPM3O75607 178 aaKnown RBP15.19■□□□□ 0.02
PTK2-250ENST00000523746 CNKSR2Q8WXI2 1034 aa15.18■□□□□ 0.02
PTK2-250ENST00000523746 SLC4A1APQ9BWU0 796 aaKnown RBP15.05■□□□□ -0
PTK2-250ENST00000523746 MAPK8IP2Q13387 824 aaPredicted RBP15.03■□□□□ -0
PTK2-250ENST00000523746 EHMT2Q96KQ7 1210 aa15.01□□□□□ -0.01
PTK2-250ENST00000523746 DNAJC5BQ9UF47 199 aa14.84□□□□□ -0.03
PTK2-250ENST00000523746 RNF216Q9NWF9 866 aaPredicted RBP14.81□□□□□ -0.04
PTK2-250ENST00000523746 DMRT2Q9Y5R5 561 aa14.81□□□□□ -0.04
PTK2-250ENST00000523746 CSRNP3Q8WYN3 585 aa14.77□□□□□ -0.05
PTK2-250ENST00000523746 HOXD11P31277 338 aaPredicted RBP14.68□□□□□ -0.06
PTK2-250ENST00000523746 ZBTB22O15209 634 aa14.56□□□□□ -0.08
PTK2-250ENST00000523746 FOXD4L1Q9NU39 408 aa14.4□□□□□ -0.1
PTK2-250ENST00000523746 SLC4A2P04920 1241 aa14.28□□□□□ -0.12
PTK2-250ENST00000523746 MYCNP04198 464 aaPredicted RBP14.02□□□□□ -0.17
PTK2-250ENST00000523746 DCAF8L1A6NGE4 600 aa13.97□□□□□ -0.17
PTK2-250ENST00000523746 ATXN8OSP0DMR3 200 aa13.91□□□□□ -0.18
PTK2-250ENST00000523746 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.85□□□□□ -0.192e-7■■■□□ 16
PTK2-250ENST00000523746 U3KPZ7 1027 aaPredicted RBP13.77□□□□□ -0.21
PTK2-250ENST00000523746 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.69□□□□□ -0.22
PTK2-250ENST00000523746 HNRNPUL2Q1KMD3 747 aaKnown RBP13.69□□□□□ -0.22
PTK2-250ENST00000523746 SAMD1Q6SPF0 538 aaPredicted RBP13.66□□□□□ -0.22
PTK2-250ENST00000523746 ATF5Q9Y2D1 282 aaPredicted RBP13.62□□□□□ -0.23
PTK2-250ENST00000523746 POTEDQ86YR6 584 aa13.51□□□□□ -0.25
PTK2-250ENST00000523746 APLP2Q06481 763 aa13.43□□□□□ -0.26
PTK2-250ENST00000523746 RNF39Q9H2S5 420 aa13.42□□□□□ -0.26
PTK2-250ENST00000523746 ZNF219Q9P2Y4 722 aaPredicted RBP13.34□□□□□ -0.27
PTK2-250ENST00000523746 C1QBPQ07021 282 aaKnown RBP13.26□□□□□ -0.29
PTK2-250ENST00000523746 FKBP8Q14318 412 aa13.25□□□□□ -0.29
PTK2-250ENST00000523746 SPINK5Q9NQ38 1064 aaPredicted RBP13.24□□□□□ -0.29
PTK2-250ENST00000523746 TRHP20396 242 aaPredicted RBP13.12□□□□□ -0.31
PTK2-250ENST00000523746 CAPN15O75808 1086 aa13.09□□□□□ -0.31
PTK2-250ENST00000523746 MKRN4PQ13434 485 aaPredicted RBP13.07□□□□□ -0.32
PTK2-250ENST00000523746 POLA2Q14181 598 aa13.05□□□□□ -0.32
PTK2-250ENST00000523746 FBLN2P98095 1184 aa12.95□□□□□ -0.34
PTK2-250ENST00000523746 SPDYE4A6NLX3 237 aa12.9□□□□□ -0.34
PTK2-250ENST00000523746 ABCB7O75027 752 aa12.89□□□□□ -0.35
PTK2-250ENST00000523746 ZBTB12Q9Y330 459 aaPredicted RBP12.89□□□□□ -0.35
PTK2-250ENST00000523746 DSG3P32926 999 aa12.88□□□□□ -0.35
PTK2-250ENST00000523746 PROM2Q8N271 834 aa12.88□□□□□ -0.35
PTK2-250ENST00000523746 AMER1Q5JTC6 1135 aaPredicted RBP12.79□□□□□ -0.36
PTK2-250ENST00000523746 RTN4Q9NQC3 1192 aaKnown RBP12.77□□□□□ -0.37
PTK2-250ENST00000523746 FBXO3Q9UK99 471 aa12.7□□□□□ -0.38
PTK2-250ENST00000523746 CACNB1Q02641 598 aaPredicted RBP12.68□□□□□ -0.38
PTK2-250ENST00000523746 OSCARQ8IYS5 282 aa12.6□□□□□ -0.39
PTK2-250ENST00000523746 SPDYE2BA6NHP3 402 aa12.59□□□□□ -0.39
PTK2-250ENST00000523746 SPDYE6P0CI01 402 aa12.59□□□□□ -0.39
PTK2-250ENST00000523746 SPDYE2Q495Y8 402 aa12.59□□□□□ -0.39
PTK2-250ENST00000523746 SSUH2Q9Y2M2 353 aa12.58□□□□□ -0.4
PTK2-250ENST00000523746 VASPP50552 380 aaPredicted RBP12.54□□□□□ -0.4
PTK2-250ENST00000523746 ZNF692Q9BU19 519 aaPredicted RBP12.54□□□□□ -0.4
PTK2-250ENST00000523746 IFNLR1Q8IU57 520 aaPredicted RBP12.41□□□□□ -0.42
PTK2-250ENST00000523746 PABPN1Q86U42 306 aaKnown RBP eCLIP12.4□□□□□ -0.42
PTK2-250ENST00000523746 STAG3Q9UJ98 1225 aa12.36□□□□□ -0.43
PTK2-250ENST00000523746 RBM42Q9BTD8 480 aaKnown RBP12.23□□□□□ -0.45
PTK2-250ENST00000523746 AKT1S1Q96B36 256 aa12.19□□□□□ -0.46
PTK2-250ENST00000523746 PKD2Q13563 968 aa12.16□□□□□ -0.46
PTK2-250ENST00000523746 SPOCK2Q92563 424 aa12.16□□□□□ -0.46
PTK2-250ENST00000523746 PLCD3Q8N3E9 789 aa12.15□□□□□ -0.46
PTK2-250ENST00000523746 SLC24A1O60721 1099 aa12.14□□□□□ -0.47
PTK2-250ENST00000523746 MIER1Q8N108 512 aa12.13□□□□□ -0.47
PTK2-250ENST00000523746 KLHL34Q8N239 644 aa12.12□□□□□ -0.47
PTK2-250ENST00000523746 SPDYE1Q8NFV5 336 aaPredicted RBP12.09□□□□□ -0.47
PTK2-250ENST00000523746 REM2Q8IYK8 340 aaPredicted RBP12.06□□□□□ -0.48
PTK2-250ENST00000523746 ZBTB47Q9UFB7 747 aaPredicted RBP12.05□□□□□ -0.48
PTK2-250ENST00000523746 PLEKHG5O94827 1062 aa12.02□□□□□ -0.49
PTK2-250ENST00000523746 CREBZFQ9NS37 354 aa11.94□□□□□ -0.5
PTK2-250ENST00000523746 CLEC11AQ9Y240 323 aa11.94□□□□□ -0.5
PTK2-250ENST00000523746 ECM2O94769 699 aaPredicted RBP11.93□□□□□ -0.5
PTK2-250ENST00000523746 PRR29P0C7W0 189 aa11.93□□□□□ -0.5
PTK2-250ENST00000523746 PITPNM1O00562 1244 aa11.92□□□□□ -0.5
PTK2-250ENST00000523746 MNX1P50219 401 aaPredicted RBP11.92□□□□□ -0.5
PTK2-250ENST00000523746 NUBP1P53384 320 aa11.89□□□□□ -0.51
PTK2-250ENST00000523746 RGL2O15211 777 aa11.85□□□□□ -0.51
PTK2-250ENST00000523746 DCAF8L2P0C7V8 631 aa11.84□□□□□ -0.51
PTK2-250ENST00000523746 TRIM41Q8WV44 630 aa11.84□□□□□ -0.51
PTK2-250ENST00000523746 CIZ1Q9ULV3 898 aaPredicted RBP11.84□□□□□ -0.51
PTK2-250ENST00000523746 PLCB2Q00722 1185 aa11.83□□□□□ -0.52
PTK2-250ENST00000523746 GSE1Q14687 1217 aa11.81□□□□□ -0.52
PTK2-250ENST00000523746 NPM1P06748 294 aaKnown RBP eCLIP11.76□□□□□ -0.53
PTK2-250ENST00000523746 BBXQ8WY36 941 aaPredicted RBP11.73□□□□□ -0.53
PTK2-250ENST00000523746 RASEFQ8IZ41 740 aa11.72□□□□□ -0.53
PTK2-250ENST00000523746 RNF25Q96BH1 459 aaPredicted RBP11.72□□□□□ -0.53
PTK2-250ENST00000523746 FAM212AQ96EL1 285 aa11.72□□□□□ -0.53
PTK2-250ENST00000523746 DCAF8Q5TAQ9 597 aa11.7□□□□□ -0.54
PTK2-250ENST00000523746 CHRM1P11229 460 aaPredicted RBP11.68□□□□□ -0.54
PTK2-250ENST00000523746 FXR2P51116 673 aaKnown RBP eCLIP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms