RNA–Protein interactions for RNA: ENST00000523670.5

PTK2-247, Transcript of protein tyrosine kinase 2, humanhuman

TSL 4

Gene PTK2, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK2-247ENST00000523670 AEBP2Q6ZN18 517 aaPredicted RBP26.15■■□□□ 1.78
PTK2-247ENST00000523670 CHIC1Q5VXU3 224 aa25.45■■□□□ 1.66
PTK2-247ENST00000523670 SENP3Q9H4L4 574 aaPredicted RBP22.42■■□□□ 1.18
PTK2-247ENST00000523670 PHF23Q9BUL5 403 aaPredicted RBP22.24■■□□□ 1.15
PTK2-247ENST00000523670 FOXD1Q16676 465 aa20.69■□□□□ 0.9
PTK2-247ENST00000523670 PLPPR3Q6T4P5 718 aa20.63■□□□□ 0.89
PTK2-247ENST00000523670 PPP6R1Q9UPN7 881 aa19.67■□□□□ 0.74
PTK2-247ENST00000523670 ADRA2BP18089 450 aa19.65■□□□□ 0.74
PTK2-247ENST00000523670 PIAS4Q8N2W9 510 aaPredicted RBP19.51■□□□□ 0.71
PTK2-247ENST00000523670 MSH5O43196 834 aa19.34■□□□□ 0.69
PTK2-247ENST00000523670 SCAF1Q9H7N4 1312 aaKnown RBP18.22■□□□□ 0.51
PTK2-247ENST00000523670 PPP4R3CPQ6ZMV5 832 aa18.08■□□□□ 0.48
PTK2-247ENST00000523670 MAPK8IP2Q13387 824 aaPredicted RBP17.86■□□□□ 0.45
PTK2-247ENST00000523670 POTEDQ86YR6 584 aa17.86■□□□□ 0.45
PTK2-247ENST00000523670 DMRT2Q9Y5R5 561 aa17.82■□□□□ 0.44
PTK2-247ENST00000523670 CNKSR2Q8WXI2 1034 aa17.69■□□□□ 0.42
PTK2-247ENST00000523670 NCBP3Q53F19 620 aaKnown RBP17.66■□□□□ 0.42
PTK2-247ENST00000523670 RNF216Q9NWF9 866 aaPredicted RBP17.4■□□□□ 0.38
PTK2-247ENST00000523670 HOXD11P31277 338 aaPredicted RBP17.37■□□□□ 0.37
PTK2-247ENST00000523670 KCNA4P22459 653 aa17.33■□□□□ 0.36
PTK2-247ENST00000523670 NPM3O75607 178 aaKnown RBP17.26■□□□□ 0.35
PTK2-247ENST00000523670 DCAF8L1A6NGE4 600 aa16.98■□□□□ 0.31
PTK2-247ENST00000523670 DNAJC5BQ9UF47 199 aa16.97■□□□□ 0.31
PTK2-247ENST00000523670 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.54■□□□□ 0.242e-7■■■□□ 18
PTK2-247ENST00000523670 SLC4A1APQ9BWU0 796 aaKnown RBP16.54■□□□□ 0.24
PTK2-247ENST00000523670 RNF39Q9H2S5 420 aa16.46■□□□□ 0.23
PTK2-247ENST00000523670 C1QBPQ07021 282 aaKnown RBP16.33■□□□□ 0.2
PTK2-247ENST00000523670 SLC4A2P04920 1241 aa16.31■□□□□ 0.2
PTK2-247ENST00000523670 U3KPZ7 1027 aaPredicted RBP16.2■□□□□ 0.18
PTK2-247ENST00000523670 CACNB1Q02641 598 aaPredicted RBP16.19■□□□□ 0.18
PTK2-247ENST00000523670 FOXD4L1Q9NU39 408 aa16.13■□□□□ 0.17
PTK2-247ENST00000523670 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.11■□□□□ 0.17
PTK2-247ENST00000523670 HNRNPUL2Q1KMD3 747 aaKnown RBP16.11■□□□□ 0.17
PTK2-247ENST00000523670 MYCNP04198 464 aaPredicted RBP16.05■□□□□ 0.16
PTK2-247ENST00000523670 APLP2Q06481 763 aa16.04■□□□□ 0.16
PTK2-247ENST00000523670 SAMD1Q6SPF0 538 aaPredicted RBP15.99■□□□□ 0.15
PTK2-247ENST00000523670 ZBTB22O15209 634 aa15.89■□□□□ 0.13
PTK2-247ENST00000523670 CAPN15O75808 1086 aa15.78■□□□□ 0.12
PTK2-247ENST00000523670 SPINK5Q9NQ38 1064 aaPredicted RBP15.75■□□□□ 0.11
PTK2-247ENST00000523670 ZNF219Q9P2Y4 722 aaPredicted RBP15.74■□□□□ 0.11
PTK2-247ENST00000523670 EHMT2Q96KQ7 1210 aa15.71■□□□□ 0.11
PTK2-247ENST00000523670 ATXN8OSP0DMR3 200 aa15.67■□□□□ 0.1
PTK2-247ENST00000523670 CSRNP3Q8WYN3 585 aa15.67■□□□□ 0.1
PTK2-247ENST00000523670 TRHP20396 242 aaPredicted RBP15.62■□□□□ 0.09
PTK2-247ENST00000523670 DSG3P32926 999 aa15.56■□□□□ 0.08
PTK2-247ENST00000523670 ATF5Q9Y2D1 282 aaPredicted RBP15.44■□□□□ 0.06
PTK2-247ENST00000523670 ABCB7O75027 752 aa15.38■□□□□ 0.05
PTK2-247ENST00000523670 POLA2Q14181 598 aa15.33■□□□□ 0.04
PTK2-247ENST00000523670 ZBTB12Q9Y330 459 aaPredicted RBP15.25■□□□□ 0.03
PTK2-247ENST00000523670 FBLN2P98095 1184 aa15.02■□□□□ -0
PTK2-247ENST00000523670 RBM42Q9BTD8 480 aaKnown RBP14.99□□□□□ -0.01
PTK2-247ENST00000523670 MKRN4PQ13434 485 aaPredicted RBP14.81□□□□□ -0.04
PTK2-247ENST00000523670 OSCARQ8IYS5 282 aa14.8□□□□□ -0.04
PTK2-247ENST00000523670 SPDYE2BA6NHP3 402 aa14.74□□□□□ -0.05
PTK2-247ENST00000523670 SPDYE6P0CI01 402 aa14.74□□□□□ -0.05
PTK2-247ENST00000523670 SPDYE2Q495Y8 402 aa14.74□□□□□ -0.05
PTK2-247ENST00000523670 AKT1S1Q96B36 256 aa14.69□□□□□ -0.06
PTK2-247ENST00000523670 ZNF692Q9BU19 519 aaPredicted RBP14.58□□□□□ -0.08
PTK2-247ENST00000523670 SSUH2Q9Y2M2 353 aa14.56□□□□□ -0.08
PTK2-247ENST00000523670 REM2Q8IYK8 340 aaPredicted RBP14.47□□□□□ -0.09
PTK2-247ENST00000523670 SPDYE4A6NLX3 237 aa14.45□□□□□ -0.1
PTK2-247ENST00000523670 PABPN1Q86U42 306 aaKnown RBP eCLIP14.36□□□□□ -0.11
PTK2-247ENST00000523670 SPDYE1Q8NFV5 336 aaPredicted RBP14.36□□□□□ -0.11
PTK2-247ENST00000523670 CHRDL2Q6WN34 429 aa14.34□□□□□ -0.11
PTK2-247ENST00000523670 PITPNM1O00562 1244 aa14.29□□□□□ -0.12
PTK2-247ENST00000523670 STAG3Q9UJ98 1225 aa14.22□□□□□ -0.13
PTK2-247ENST00000523670 PROM2Q8N271 834 aa14.21□□□□□ -0.13
PTK2-247ENST00000523670 FKBP8Q14318 412 aa14.2□□□□□ -0.14
PTK2-247ENST00000523670 CLEC11AQ9Y240 323 aa14.2□□□□□ -0.14
PTK2-247ENST00000523670 POTEHQ6S545 545 aa14.13□□□□□ -0.15
PTK2-247ENST00000523670 FXR2P51116 673 aaKnown RBP eCLIP14.11□□□□□ -0.15
PTK2-247ENST00000523670 PRR29P0C7W0 189 aa14.1□□□□□ -0.15
PTK2-247ENST00000523670 PIP4P2Q8N4L2 257 aa14.07□□□□□ -0.16
PTK2-247ENST00000523670 PRKAR2AP13861 404 aaKnown RBP13.95□□□□□ -0.18
PTK2-247ENST00000523670 FBXO3Q9UK99 471 aa13.92□□□□□ -0.18
PTK2-247ENST00000523670 PLEKHG5O94827 1062 aa13.82□□□□□ -0.2
PTK2-247ENST00000523670 CHADLQ6NUI6 762 aa13.81□□□□□ -0.2
PTK2-247ENST00000523670 CREBZFQ9NS37 354 aa13.81□□□□□ -0.2
PTK2-247ENST00000523670 FARP1Q9Y4F1 1045 aaPredicted RBP13.77□□□□□ -0.21
PTK2-247ENST00000523670 MIER1Q8N108 512 aa13.72□□□□□ -0.21
PTK2-247ENST00000523670 NPM1P06748 294 aaKnown RBP eCLIP13.71□□□□□ -0.21
PTK2-247ENST00000523670 PLCD3Q8N3E9 789 aa13.7□□□□□ -0.22
PTK2-247ENST00000523670 ZBTB47Q9UFB7 747 aaPredicted RBP13.7□□□□□ -0.22
PTK2-247ENST00000523670 HAX1O00165 279 aa13.69□□□□□ -0.22
PTK2-247ENST00000523670 C19orf67A6NJJ6 358 aa13.64□□□□□ -0.23
PTK2-247ENST00000523670 MNX1P50219 401 aaPredicted RBP13.63□□□□□ -0.23
PTK2-247ENST00000523670 VASPP50552 380 aaPredicted RBP13.63□□□□□ -0.23
PTK2-247ENST00000523670 PAK3O75914 559 aaPredicted RBP13.55□□□□□ -0.24
PTK2-247ENST00000523670 CD44P16070 742 aaKnown RBP13.55□□□□□ -0.24
PTK2-247ENST00000523670 SP7Q8TDD2 431 aaPredicted RBP13.51□□□□□ -0.25
PTK2-247ENST00000523670 CLCN6P51797 869 aa13.48□□□□□ -0.25
PTK2-247ENST00000523670 KLHL34Q8N239 644 aa13.44□□□□□ -0.26
PTK2-247ENST00000523670 EVX2Q03828 476 aa13.43□□□□□ -0.26
PTK2-247ENST00000523670 ZRANB1Q9UGI0 708 aa13.43□□□□□ -0.26
PTK2-247ENST00000523670 ZNF579Q8NAF0 562 aaKnown RBP13.41□□□□□ -0.26
PTK2-247ENST00000523670 NUBP1P53384 320 aa13.38□□□□□ -0.27
PTK2-247ENST00000523670 IFNLR1Q8IU57 520 aaPredicted RBP13.36□□□□□ -0.27
PTK2-247ENST00000523670 FAM212AQ96EL1 285 aa13.36□□□□□ -0.27
PTK2-247ENST00000523670 RASEFQ8IZ41 740 aa13.34□□□□□ -0.27
PTK2-247ENST00000523670 SPOCK2Q92563 424 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms