RNA–Protein interactions for RNA: ENST00000523647.1

SMARCE1P4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 4, humanhuman

BASIC

Gene SMARCE1P4, Length 241 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1P4-201ENST00000523647 AEBP2Q6ZN18 517 aaPredicted RBP22.06■■□□□ 1.12
SMARCE1P4-201ENST00000523647 CHIC1Q5VXU3 224 aa21.57■■□□□ 1.04
SMARCE1P4-201ENST00000523647 PHF23Q9BUL5 403 aaPredicted RBP18.97■□□□□ 0.63
SMARCE1P4-201ENST00000523647 SENP3Q9H4L4 574 aaPredicted RBP18.7■□□□□ 0.58
SMARCE1P4-201ENST00000523647 PLPPR3Q6T4P5 718 aa17.51■□□□□ 0.39
SMARCE1P4-201ENST00000523647 FOXD1Q16676 465 aa17.35■□□□□ 0.37
SMARCE1P4-201ENST00000523647 PPP6R1Q9UPN7 881 aa16.72■□□□□ 0.27
SMARCE1P4-201ENST00000523647 ADRA2BP18089 450 aa16.68■□□□□ 0.26
SMARCE1P4-201ENST00000523647 PIAS4Q8N2W9 510 aaPredicted RBP16.35■□□□□ 0.21
SMARCE1P4-201ENST00000523647 MSH5O43196 834 aa15.99■□□□□ 0.15
SMARCE1P4-201ENST00000523647 PPP4R3CPQ6ZMV5 832 aa15.42■□□□□ 0.06
SMARCE1P4-201ENST00000523647 SCAF1Q9H7N4 1312 aaKnown RBP15.25■□□□□ 0.03
SMARCE1P4-201ENST00000523647 MAPK8IP2Q13387 824 aaPredicted RBP15.12■□□□□ 0.01
SMARCE1P4-201ENST00000523647 KCNA4P22459 653 aa15.1■□□□□ 0.01
SMARCE1P4-201ENST00000523647 NCBP3Q53F19 620 aaKnown RBP15.01□□□□□ -0.01
SMARCE1P4-201ENST00000523647 CNKSR2Q8WXI2 1034 aa15□□□□□ -0.01
SMARCE1P4-201ENST00000523647 DMRT2Q9Y5R5 561 aa14.95□□□□□ -0.02
SMARCE1P4-201ENST00000523647 NPM3O75607 178 aaKnown RBP14.83□□□□□ -0.04
SMARCE1P4-201ENST00000523647 RNF216Q9NWF9 866 aaPredicted RBP14.71□□□□□ -0.05
SMARCE1P4-201ENST00000523647 HOXD11P31277 338 aaPredicted RBP14.66□□□□□ -0.06
SMARCE1P4-201ENST00000523647 POTEDQ86YR6 584 aa14.51□□□□□ -0.09
SMARCE1P4-201ENST00000523647 DNAJC5BQ9UF47 199 aa14.48□□□□□ -0.09
SMARCE1P4-201ENST00000523647 SLC4A1APQ9BWU0 796 aaKnown RBP14.37□□□□□ -0.11
SMARCE1P4-201ENST00000523647 DCAF8L1A6NGE4 600 aa14.2□□□□□ -0.14
SMARCE1P4-201ENST00000523647 SLC4A2P04920 1241 aa14□□□□□ -0.17
SMARCE1P4-201ENST00000523647 EHMT2Q96KQ7 1210 aa13.97□□□□□ -0.17
SMARCE1P4-201ENST00000523647 ZBTB22O15209 634 aa13.92□□□□□ -0.18
SMARCE1P4-201ENST00000523647 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.9□□□□□ -0.18
SMARCE1P4-201ENST00000523647 FOXD4L1Q9NU39 408 aa13.9□□□□□ -0.18
SMARCE1P4-201ENST00000523647 CSRNP3Q8WYN3 585 aa13.85□□□□□ -0.19
SMARCE1P4-201ENST00000523647 U3KPZ7 1027 aaPredicted RBP13.74□□□□□ -0.21
SMARCE1P4-201ENST00000523647 RNF39Q9H2S5 420 aa13.72□□□□□ -0.21
SMARCE1P4-201ENST00000523647 MYCNP04198 464 aaPredicted RBP13.7□□□□□ -0.22
SMARCE1P4-201ENST00000523647 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.55□□□□□ -0.24
SMARCE1P4-201ENST00000523647 HNRNPUL2Q1KMD3 747 aaKnown RBP13.55□□□□□ -0.24
SMARCE1P4-201ENST00000523647 C1QBPQ07021 282 aaKnown RBP13.54□□□□□ -0.24
SMARCE1P4-201ENST00000523647 SAMD1Q6SPF0 538 aaPredicted RBP13.5□□□□□ -0.25
SMARCE1P4-201ENST00000523647 ATXN8OSP0DMR3 200 aa13.43□□□□□ -0.26
SMARCE1P4-201ENST00000523647 APLP2Q06481 763 aa13.39□□□□□ -0.27
SMARCE1P4-201ENST00000523647 SPINK5Q9NQ38 1064 aaPredicted RBP13.32□□□□□ -0.28
SMARCE1P4-201ENST00000523647 ATF5Q9Y2D1 282 aaPredicted RBP13.32□□□□□ -0.28
SMARCE1P4-201ENST00000523647 CACNB1Q02641 598 aaPredicted RBP13.28□□□□□ -0.28
SMARCE1P4-201ENST00000523647 CAPN15O75808 1086 aa13.23□□□□□ -0.29
SMARCE1P4-201ENST00000523647 ZNF219Q9P2Y4 722 aaPredicted RBP13.22□□□□□ -0.29
SMARCE1P4-201ENST00000523647 TRHP20396 242 aaPredicted RBP13.17□□□□□ -0.3
SMARCE1P4-201ENST00000523647 DSG3P32926 999 aa13.05□□□□□ -0.32
SMARCE1P4-201ENST00000523647 ABCB7O75027 752 aa12.99□□□□□ -0.33
SMARCE1P4-201ENST00000523647 POLA2Q14181 598 aa12.98□□□□□ -0.33
SMARCE1P4-201ENST00000523647 ZBTB12Q9Y330 459 aaPredicted RBP12.8□□□□□ -0.36
SMARCE1P4-201ENST00000523647 MKRN4PQ13434 485 aaPredicted RBP12.76□□□□□ -0.37
SMARCE1P4-201ENST00000523647 FBLN2P98095 1184 aa12.73□□□□□ -0.37
SMARCE1P4-201ENST00000523647 OSCARQ8IYS5 282 aa12.57□□□□□ -0.4
SMARCE1P4-201ENST00000523647 FKBP8Q14318 412 aa12.48□□□□□ -0.41
SMARCE1P4-201ENST00000523647 SPDYE2BA6NHP3 402 aa12.46□□□□□ -0.41
SMARCE1P4-201ENST00000523647 SPDYE4A6NLX3 237 aa12.46□□□□□ -0.41
SMARCE1P4-201ENST00000523647 SPDYE6P0CI01 402 aa12.46□□□□□ -0.41
SMARCE1P4-201ENST00000523647 SPDYE2Q495Y8 402 aa12.46□□□□□ -0.41
SMARCE1P4-201ENST00000523647 RBM42Q9BTD8 480 aaKnown RBP12.43□□□□□ -0.42
SMARCE1P4-201ENST00000523647 SSUH2Q9Y2M2 353 aa12.4□□□□□ -0.42
SMARCE1P4-201ENST00000523647 ZNF692Q9BU19 519 aaPredicted RBP12.38□□□□□ -0.43
SMARCE1P4-201ENST00000523647 PROM2Q8N271 834 aa12.33□□□□□ -0.44
SMARCE1P4-201ENST00000523647 AKT1S1Q96B36 256 aa12.29□□□□□ -0.44
SMARCE1P4-201ENST00000523647 PABPN1Q86U42 306 aaKnown RBP eCLIP12.23□□□□□ -0.45
SMARCE1P4-201ENST00000523647 REM2Q8IYK8 340 aaPredicted RBP12.16□□□□□ -0.46
SMARCE1P4-201ENST00000523647 SPDYE1Q8NFV5 336 aaPredicted RBP12.07□□□□□ -0.48
SMARCE1P4-201ENST00000523647 FBXO3Q9UK99 471 aa12.04□□□□□ -0.48
SMARCE1P4-201ENST00000523647 PITPNM1O00562 1244 aa12.03□□□□□ -0.48
SMARCE1P4-201ENST00000523647 STAG3Q9UJ98 1225 aa12.03□□□□□ -0.48
SMARCE1P4-201ENST00000523647 CLEC11AQ9Y240 323 aa11.96□□□□□ -0.49
SMARCE1P4-201ENST00000523647 VASPP50552 380 aaPredicted RBP11.89□□□□□ -0.51
SMARCE1P4-201ENST00000523647 CHRDL2Q6WN34 429 aa11.89□□□□□ -0.51
SMARCE1P4-201ENST00000523647 PRR29P0C7W0 189 aa11.88□□□□□ -0.51
SMARCE1P4-201ENST00000523647 FXR2P51116 673 aaKnown RBP eCLIP11.81□□□□□ -0.52
SMARCE1P4-201ENST00000523647 CREBZFQ9NS37 354 aa11.78□□□□□ -0.52
SMARCE1P4-201ENST00000523647 MIER1Q8N108 512 aa11.76□□□□□ -0.53
SMARCE1P4-201ENST00000523647 PIP4P2Q8N4L2 257 aa11.76□□□□□ -0.53
SMARCE1P4-201ENST00000523647 PLCD3Q8N3E9 789 aa11.75□□□□□ -0.53
SMARCE1P4-201ENST00000523647 IFNLR1Q8IU57 520 aaPredicted RBP11.73□□□□□ -0.53
SMARCE1P4-201ENST00000523647 PLEKHG5O94827 1062 aa11.7□□□□□ -0.54
SMARCE1P4-201ENST00000523647 PRKAR2AP13861 404 aaKnown RBP11.7□□□□□ -0.54
SMARCE1P4-201ENST00000523647 CHADLQ6NUI6 762 aa11.7□□□□□ -0.54
SMARCE1P4-201ENST00000523647 MNX1P50219 401 aaPredicted RBP11.69□□□□□ -0.54
SMARCE1P4-201ENST00000523647 ZBTB47Q9UFB7 747 aaPredicted RBP11.66□□□□□ -0.54
SMARCE1P4-201ENST00000523647 FARP1Q9Y4F1 1045 aaPredicted RBP11.62□□□□□ -0.55
SMARCE1P4-201ENST00000523647 KLHL34Q8N239 644 aa11.61□□□□□ -0.55
SMARCE1P4-201ENST00000523647 SPOCK2Q92563 424 aa11.58□□□□□ -0.56
SMARCE1P4-201ENST00000523647 NPM1P06748 294 aaKnown RBP eCLIP11.55□□□□□ -0.56
SMARCE1P4-201ENST00000523647 NUBP1P53384 320 aa11.53□□□□□ -0.56
SMARCE1P4-201ENST00000523647 POTEHQ6S545 545 aa11.49□□□□□ -0.57
SMARCE1P4-201ENST00000523647 RASEFQ8IZ41 740 aa11.47□□□□□ -0.57
SMARCE1P4-201ENST00000523647 AMER1Q5JTC6 1135 aaPredicted RBP11.45□□□□□ -0.58
SMARCE1P4-201ENST00000523647 C19orf67A6NJJ6 358 aa11.41□□□□□ -0.58
SMARCE1P4-201ENST00000523647 FAM212AQ96EL1 285 aa11.41□□□□□ -0.58
SMARCE1P4-201ENST00000523647 RTN4Q9NQC3 1192 aaKnown RBP11.4□□□□□ -0.58
SMARCE1P4-201ENST00000523647 GSE1Q14687 1217 aa11.38□□□□□ -0.59
SMARCE1P4-201ENST00000523647 CD44P16070 742 aaKnown RBP11.37□□□□□ -0.59
SMARCE1P4-201ENST00000523647 PKD2Q13563 968 aa11.36□□□□□ -0.59
SMARCE1P4-201ENST00000523647 DCAF8Q5TAQ9 597 aa11.35□□□□□ -0.59
SMARCE1P4-201ENST00000523647 CIZ1Q9ULV3 898 aaPredicted RBP11.35□□□□□ -0.59
SMARCE1P4-201ENST00000523647 PAK3O75914 559 aaPredicted RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 252.6 ms