RNA–Protein interactions for RNA: ENST00000523338.5

TNIP1-218, Transcript of TNFAIP3 interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNIP1, Length 2,711 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-218ENST00000523338 NISCHQ9Y2I1 1504 aa26.11■■□□□ 1.77
TNIP1-218ENST00000523338 SHROOM4Q9ULL8 1493 aa22.66■■□□□ 1.22
TNIP1-218ENST00000523338 DCAF8L2P0C7V8 631 aa22.3■■□□□ 1.16
TNIP1-218ENST00000523338 SUPT5HO00267 1087 aaKnown RBP22.16■■□□□ 1.14
TNIP1-218ENST00000523338 CCDC180Q9P1Z9 1646 aa22.03■■□□□ 1.12
TNIP1-218ENST00000523338 ZCCHC6Q5VYS8 1495 aaKnown RBP22■■□□□ 1.11
TNIP1-218ENST00000523338 CHIC1Q5VXU3 224 aa21.25■□□□□ 0.99
TNIP1-218ENST00000523338 DCAF1Q9Y4B6 1507 aa21.18■□□□□ 0.98
TNIP1-218ENST00000523338 MYO15BQ96JP2 1530 aa21.12■□□□□ 0.97
TNIP1-218ENST00000523338 ABCC9O60706 1549 aa21.02■□□□□ 0.96
TNIP1-218ENST00000523338 SCRIBQ14160 1630 aa21■□□□□ 0.95
TNIP1-218ENST00000523338 LOC105371045A0A1W2PR82 267 aa20.84■□□□□ 0.93
TNIP1-218ENST00000523338 RSF1Q96T23 1441 aaPredicted RBP20.71■□□□□ 0.91
TNIP1-218ENST00000523338 PCGF6Q9BYE7 350 aa20.64■□□□□ 0.9
TNIP1-218ENST00000523338 EHMT2Q96KQ7 1210 aa20.6■□□□□ 0.89
TNIP1-218ENST00000523338 FAM9AQ8IZU1 332 aaPredicted RBP20.57■□□□□ 0.88
TNIP1-218ENST00000523338 CECR2Q9BXF3 1484 aa20.56■□□□□ 0.88
TNIP1-218ENST00000523338 TRIM41Q8WV44 630 aa20.5■□□□□ 0.87
TNIP1-218ENST00000523338 NACADO15069 1562 aa20.5■□□□□ 0.87
TNIP1-218ENST00000523338 RB1CC1Q8TDY2 1594 aa20.48■□□□□ 0.87
TNIP1-218ENST00000523338 MROH2BQ7Z745 1585 aa20.4■□□□□ 0.86
TNIP1-218ENST00000523338 HRCP23327 699 aa20.32■□□□□ 0.84
TNIP1-218ENST00000523338 WIZO95785 1651 aa20.29■□□□□ 0.84
TNIP1-218ENST00000523338 PABPN1Q86U42 306 aaKnown RBP eCLIP20.25■□□□□ 0.83
TNIP1-218ENST00000523338 PPARGC1BQ86YN6 1023 aaKnown RBP20.21■□□□□ 0.83
TNIP1-218ENST00000523338 TRIM26Q12899 539 aaPredicted RBP20.06■□□□□ 0.8
TNIP1-218ENST00000523338 BAZ1AQ9NRL2 1556 aaPredicted RBP20.03■□□□□ 0.8
TNIP1-218ENST00000523338 UNC13AQ9UPW8 1703 aa19.96■□□□□ 0.79
TNIP1-218ENST00000523338 SMARCA4P51532 1647 aa19.89■□□□□ 0.78
TNIP1-218ENST00000523338 CCDC88BA6NC98 1476 aa19.88■□□□□ 0.77
TNIP1-218ENST00000523338 ABCC8Q09428 1581 aa19.88■□□□□ 0.77
TNIP1-218ENST00000523338 TTBK1Q5TCY1 1321 aaPredicted RBP19.84■□□□□ 0.77
TNIP1-218ENST00000523338 TOP2AP11388 1531 aaKnown RBP19.81■□□□□ 0.76
TNIP1-218ENST00000523338 BICRAQ9NZM4 1560 aa19.76■□□□□ 0.75
TNIP1-218ENST00000523338 SMARCA2P51531 1590 aa19.75■□□□□ 0.75
TNIP1-218ENST00000523338 EIF4G1Q04637 1599 aaKnown RBP19.72■□□□□ 0.75
TNIP1-218ENST00000523338 SOGA1O94964 1423 aa19.69■□□□□ 0.74
TNIP1-218ENST00000523338 UBTFP17480 764 aaKnown RBP19.63■□□□□ 0.73
TNIP1-218ENST00000523338 RUSC2Q8N2Y8 1516 aa19.62■□□□□ 0.73
TNIP1-218ENST00000523338 RANGAP1P46060 587 aaPredicted RBP19.54■□□□□ 0.72
TNIP1-218ENST00000523338 CSRNP3Q8WYN3 585 aa19.54■□□□□ 0.72
TNIP1-218ENST00000523338 PELP1Q8IZL8 1130 aaKnown RBP19.52■□□□□ 0.72
TNIP1-218ENST00000523338 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.52■□□□□ 0.71
TNIP1-218ENST00000523338 ATAD2BQ9ULI0 1458 aa19.48■□□□□ 0.71
TNIP1-218ENST00000523338 WRNQ14191 1432 aaPredicted RBP eCLIP19.47■□□□□ 0.71
TNIP1-218ENST00000523338 BAZ1BQ9UIG0 1483 aaKnown RBP19.46■□□□□ 0.71
TNIP1-218ENST00000523338 CEP162Q5TB80 1403 aa19.45■□□□□ 0.7
TNIP1-218ENST00000523338 ZEB1P37275 1124 aaPredicted RBP19.42■□□□□ 0.7
TNIP1-218ENST00000523338 CCER1Q8TC90 406 aaPredicted RBP19.38■□□□□ 0.69
TNIP1-218ENST00000523338 PEG3Q9GZU2 1588 aa19.36■□□□□ 0.69
TNIP1-218ENST00000523338 SYNJ1O43426 1573 aa19.35■□□□□ 0.69
TNIP1-218ENST00000523338 TNIKQ9UKE5 1360 aa19.34■□□□□ 0.69
TNIP1-218ENST00000523338 EEA1Q15075 1411 aa19.26■□□□□ 0.67
TNIP1-218ENST00000523338 GOLGA3Q08378 1498 aa19.25■□□□□ 0.67
TNIP1-218ENST00000523338 HNRNPUL2Q1KMD3 747 aaKnown RBP19.17■□□□□ 0.66
TNIP1-218ENST00000523338 RAPGEF2Q9Y4G8 1499 aa19.16■□□□□ 0.66
TNIP1-218ENST00000523338 CEP164Q9UPV0 1460 aa19.14■□□□□ 0.65
TNIP1-218ENST00000523338 CLIP1P30622 1438 aa19.13■□□□□ 0.65
TNIP1-218ENST00000523338 APLP2Q06481 763 aa19.08■□□□□ 0.65
TNIP1-218ENST00000523338 NCAPD3P42695 1498 aa19.05■□□□□ 0.64
TNIP1-218ENST00000523338 TOP2BQ02880 1626 aa19.01■□□□□ 0.63
TNIP1-218ENST00000523338 MYT1Q01538 1121 aa19.01■□□□□ 0.63
TNIP1-218ENST00000523338 KIF21BO75037 1637 aa19■□□□□ 0.63
TNIP1-218ENST00000523338 CUX1P39880 1505 aa18.96■□□□□ 0.63
TNIP1-218ENST00000523338 VPS8Q8N3P4 1428 aa18.94■□□□□ 0.62
TNIP1-218ENST00000523338 HMGXB3Q12766 1538 aa18.94■□□□□ 0.62
TNIP1-218ENST00000523338 CFTRP13569 1480 aa18.9■□□□□ 0.62
TNIP1-218ENST00000523338 KANK4Q5T7N3 995 aaPredicted RBP18.88■□□□□ 0.61
TNIP1-218ENST00000523338 BIVM-ERCC5R4GMW8 1640 aa18.87■□□□□ 0.61
TNIP1-218ENST00000523338 DIEXFQ68CQ4 756 aaKnown RBP18.87■□□□□ 0.61
TNIP1-218ENST00000523338 KIF27Q86VH2 1401 aa18.86■□□□□ 0.61
TNIP1-218ENST00000523338 PRXQ9BXM0 1461 aa18.84■□□□□ 0.61
TNIP1-218ENST00000523338 ITGAEP38570 1179 aa18.81■□□□□ 0.6
TNIP1-218ENST00000523338 CADPSQ9ULU8 1353 aa18.79■□□□□ 0.6
TNIP1-218ENST00000523338 CUX2O14529 1486 aa18.79■□□□□ 0.6
TNIP1-218ENST00000523338 P3H3Q8IVL6 736 aa18.79■□□□□ 0.6
TNIP1-218ENST00000523338 ARAP1Q96P48 1450 aa18.77■□□□□ 0.6
TNIP1-218ENST00000523338 ATP1B4Q9UN42 357 aaPredicted RBP18.75■□□□□ 0.59
TNIP1-218ENST00000523338 CC2D2AQ9P2K1 1620 aa18.75■□□□□ 0.59
TNIP1-218ENST00000523338 SCAF1Q9H7N4 1312 aaKnown RBP18.73■□□□□ 0.59
TNIP1-218ENST00000523338 IGF1RP08069 1367 aa18.72■□□□□ 0.59
TNIP1-218ENST00000523338 ERICH3Q5RHP9 1530 aa18.71■□□□□ 0.59
TNIP1-218ENST00000523338 DNAJC5BQ9UF47 199 aa18.7■□□□□ 0.58
TNIP1-218ENST00000523338 ZNF316A6NFI3 1004 aaPredicted RBP18.69■□□□□ 0.58
TNIP1-218ENST00000523338 FGD5Q6ZNL6 1462 aa18.69■□□□□ 0.58
TNIP1-218ENST00000523338 NESP48681 1621 aa18.68■□□□□ 0.58
TNIP1-218ENST00000523338 CARMIL1Q5VZK9 1371 aa18.65■□□□□ 0.58
TNIP1-218ENST00000523338 ARHGAP35Q9NRY4 1499 aa18.65■□□□□ 0.58
TNIP1-218ENST00000523338 YTHDC1Q96MU7 727 aaKnown RBP18.64■□□□□ 0.57
TNIP1-218ENST00000523338 NEUROD1Q13562 356 aa18.63■□□□□ 0.57
TNIP1-218ENST00000523338 FANCD2Q9BXW9 1451 aa18.63■□□□□ 0.57
TNIP1-218ENST00000523338 RAD54L2Q9Y4B4 1467 aa18.63■□□□□ 0.57
TNIP1-218ENST00000523338 ACIN1Q9UKV3 1341 aaKnown RBP18.53■□□□□ 0.56
TNIP1-218ENST00000523338 MIER1Q8N108 512 aa18.53■□□□□ 0.56
TNIP1-218ENST00000523338 PRDM2Q13029 1718 aa18.51■□□□□ 0.55
TNIP1-218ENST00000523338 FAM50AQ14320 339 aaKnown RBP18.51■□□□□ 0.55
TNIP1-218ENST00000523338 DHX57Q6P158 1386 aaKnown RBP18.49■□□□□ 0.55
TNIP1-218ENST00000523338 CCNB3Q8WWL7 1395 aa18.49■□□□□ 0.55
TNIP1-218ENST00000523338 TDRD9Q8NDG6 1382 aaKnown RBP18.47■□□□□ 0.55
TNIP1-218ENST00000523338 POLA1P09884 1462 aaPredicted RBP18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 462 ms