RNA–Protein interactions for RNA: ENST00000522778.1

LINC01609-202, Transcript of long intergenic non-protein coding RNA 1609, humanhuman

TSL 2 BASIC

Gene LINC01609, Length 566 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01609-202ENST00000522778 AEBP2Q6ZN18 517 aaPredicted RBP31.55■■■□□ 2.64
LINC01609-202ENST00000522778 CHIC1Q5VXU3 224 aa30.36■■■□□ 2.45
LINC01609-202ENST00000522778 SENP3Q9H4L4 574 aaPredicted RBP26.89■■□□□ 1.9
LINC01609-202ENST00000522778 PHF23Q9BUL5 403 aaPredicted RBP26.64■■□□□ 1.86
LINC01609-202ENST00000522778 FOXD1Q16676 465 aa24.98■■□□□ 1.59
LINC01609-202ENST00000522778 PLPPR3Q6T4P5 718 aa24.48■■□□□ 1.51
LINC01609-202ENST00000522778 PPP6R1Q9UPN7 881 aa23.66■■□□□ 1.38
LINC01609-202ENST00000522778 ADRA2BP18089 450 aa23.65■■□□□ 1.38
LINC01609-202ENST00000522778 PIAS4Q8N2W9 510 aaPredicted RBP23.51■■□□□ 1.35
LINC01609-202ENST00000522778 MSH5O43196 834 aa23.25■■□□□ 1.31
LINC01609-202ENST00000522778 POTEDQ86YR6 584 aa21.98■■□□□ 1.11
LINC01609-202ENST00000522778 SCAF1Q9H7N4 1312 aaKnown RBP21.65■■□□□ 1.06
LINC01609-202ENST00000522778 MAPK8IP2Q13387 824 aaPredicted RBP21.59■■□□□ 1.05
LINC01609-202ENST00000522778 PPP4R3CPQ6ZMV5 832 aa21.5■■□□□ 1.03
LINC01609-202ENST00000522778 DMRT2Q9Y5R5 561 aa21.37■■□□□ 1.01
LINC01609-202ENST00000522778 CNKSR2Q8WXI2 1034 aa21.01■□□□□ 0.95
LINC01609-202ENST00000522778 NCBP3Q53F19 620 aaKnown RBP20.83■□□□□ 0.93
LINC01609-202ENST00000522778 HOXD11P31277 338 aaPredicted RBP20.71■□□□□ 0.91
LINC01609-202ENST00000522778 RNF216Q9NWF9 866 aaPredicted RBP20.7■□□□□ 0.9
LINC01609-202ENST00000522778 DCAF8L1A6NGE4 600 aa20.58■□□□□ 0.89
LINC01609-202ENST00000522778 NPM3O75607 178 aaKnown RBP20.5■□□□□ 0.87
LINC01609-202ENST00000522778 KCNA4P22459 653 aa20.49■□□□□ 0.87
LINC01609-202ENST00000522778 DNAJC5BQ9UF47 199 aa19.88■□□□□ 0.77
LINC01609-202ENST00000522778 RNF39Q9H2S5 420 aa19.85■□□□□ 0.77
LINC01609-202ENST00000522778 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.83■□□□□ 0.77
LINC01609-202ENST00000522778 CACNB1Q02641 598 aaPredicted RBP19.74■□□□□ 0.75
LINC01609-202ENST00000522778 C1QBPQ07021 282 aaKnown RBP19.59■□□□□ 0.73
LINC01609-202ENST00000522778 SLC4A1APQ9BWU0 796 aaKnown RBP19.45■□□□□ 0.7
LINC01609-202ENST00000522778 SLC4A2P04920 1241 aa19.44■□□□□ 0.7
LINC01609-202ENST00000522778 U3KPZ7 1027 aaPredicted RBP19.4■□□□□ 0.7
LINC01609-202ENST00000522778 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.03■□□□□ 0.64
LINC01609-202ENST00000522778 HNRNPUL2Q1KMD3 747 aaKnown RBP19.03■□□□□ 0.64
LINC01609-202ENST00000522778 SPINK5Q9NQ38 1064 aaPredicted RBP19.02■□□□□ 0.64
LINC01609-202ENST00000522778 CAPN15O75808 1086 aa19.01■□□□□ 0.63
LINC01609-202ENST00000522778 FOXD4L1Q9NU39 408 aa19■□□□□ 0.63
LINC01609-202ENST00000522778 MYCNP04198 464 aaPredicted RBP18.97■□□□□ 0.63
LINC01609-202ENST00000522778 APLP2Q06481 763 aa18.95■□□□□ 0.62
LINC01609-202ENST00000522778 SAMD1Q6SPF0 538 aaPredicted RBP18.94■□□□□ 0.62
LINC01609-202ENST00000522778 ZBTB22O15209 634 aa18.82■□□□□ 0.6
LINC01609-202ENST00000522778 TRHP20396 242 aaPredicted RBP18.81■□□□□ 0.6
LINC01609-202ENST00000522778 ZNF219Q9P2Y4 722 aaPredicted RBP18.76■□□□□ 0.59
LINC01609-202ENST00000522778 DSG3P32926 999 aa18.74■□□□□ 0.59
LINC01609-202ENST00000522778 ABCB7O75027 752 aa18.61■□□□□ 0.57
LINC01609-202ENST00000522778 ATF5Q9Y2D1 282 aaPredicted RBP18.48■□□□□ 0.55
LINC01609-202ENST00000522778 EHMT2Q96KQ7 1210 aa18.41■□□□□ 0.54
LINC01609-202ENST00000522778 POLA2Q14181 598 aa18.36■□□□□ 0.53
LINC01609-202ENST00000522778 ATXN8OSP0DMR3 200 aa18.34■□□□□ 0.53
LINC01609-202ENST00000522778 CSRNP3Q8WYN3 585 aa18.32■□□□□ 0.52
LINC01609-202ENST00000522778 ZBTB12Q9Y330 459 aaPredicted RBP18.03■□□□□ 0.48
LINC01609-202ENST00000522778 RBM42Q9BTD8 480 aaKnown RBP17.91■□□□□ 0.46
LINC01609-202ENST00000522778 OSCARQ8IYS5 282 aa17.79■□□□□ 0.44
LINC01609-202ENST00000522778 FBLN2P98095 1184 aa17.78■□□□□ 0.44
LINC01609-202ENST00000522778 MKRN4PQ13434 485 aaPredicted RBP17.63■□□□□ 0.41
LINC01609-202ENST00000522778 AKT1S1Q96B36 256 aa17.56■□□□□ 0.4
LINC01609-202ENST00000522778 SPDYE2BA6NHP3 402 aa17.49■□□□□ 0.39
LINC01609-202ENST00000522778 SPDYE6P0CI01 402 aa17.49■□□□□ 0.39
LINC01609-202ENST00000522778 SPDYE2Q495Y8 402 aa17.49■□□□□ 0.39
LINC01609-202ENST00000522778 REM2Q8IYK8 340 aaPredicted RBP17.39■□□□□ 0.37
LINC01609-202ENST00000522778 ZNF692Q9BU19 519 aaPredicted RBP17.38■□□□□ 0.37
LINC01609-202ENST00000522778 CHRDL2Q6WN34 429 aa17.34■□□□□ 0.37
LINC01609-202ENST00000522778 POTEHQ6S545 545 aa17.33■□□□□ 0.36
LINC01609-202ENST00000522778 SSUH2Q9Y2M2 353 aa17.28■□□□□ 0.36
LINC01609-202ENST00000522778 PITPNM1O00562 1244 aa17.22■□□□□ 0.35
LINC01609-202ENST00000522778 PABPN1Q86U42 306 aaKnown RBP eCLIP17.14■□□□□ 0.33
LINC01609-202ENST00000522778 SPDYE1Q8NFV5 336 aaPredicted RBP17.1■□□□□ 0.33
LINC01609-202ENST00000522778 CLEC11AQ9Y240 323 aa17.1■□□□□ 0.33
LINC01609-202ENST00000522778 SPDYE4A6NLX3 237 aa17.07■□□□□ 0.32
LINC01609-202ENST00000522778 PIP4P2Q8N4L2 257 aa17.01■□□□□ 0.31
LINC01609-202ENST00000522778 FXR2P51116 673 aaKnown RBP eCLIP16.94■□□□□ 0.3
LINC01609-202ENST00000522778 PRR29P0C7W0 189 aa16.85■□□□□ 0.29
LINC01609-202ENST00000522778 PRKAR2AP13861 404 aaKnown RBP16.8■□□□□ 0.28
LINC01609-202ENST00000522778 STAG3Q9UJ98 1225 aa16.73■□□□□ 0.27
LINC01609-202ENST00000522778 CHADLQ6NUI6 762 aa16.7■□□□□ 0.26
LINC01609-202ENST00000522778 FKBP8Q14318 412 aa16.66■□□□□ 0.26
LINC01609-202ENST00000522778 HAX1O00165 279 aa16.63■□□□□ 0.25
LINC01609-202ENST00000522778 PROM2Q8N271 834 aa16.63■□□□□ 0.25
LINC01609-202ENST00000522778 CREBZFQ9NS37 354 aa16.48■□□□□ 0.23
LINC01609-202ENST00000522778 FARP1Q9Y4F1 1045 aaPredicted RBP16.47■□□□□ 0.23
LINC01609-202ENST00000522778 SP7Q8TDD2 431 aaPredicted RBP16.44■□□□□ 0.22
LINC01609-202ENST00000522778 C19orf67A6NJJ6 358 aa16.39■□□□□ 0.21
LINC01609-202ENST00000522778 EVX2Q03828 476 aa16.39■□□□□ 0.21
LINC01609-202ENST00000522778 CD44P16070 742 aaKnown RBP16.3■□□□□ 0.2
LINC01609-202ENST00000522778 PLEKHG5O94827 1062 aa16.25■□□□□ 0.19
LINC01609-202ENST00000522778 MIER1Q8N108 512 aa16.25■□□□□ 0.19
LINC01609-202ENST00000522778 NPM1P06748 294 aaKnown RBP eCLIP16.24■□□□□ 0.19
LINC01609-202ENST00000522778 MNX1P50219 401 aaPredicted RBP16.21■□□□□ 0.19
LINC01609-202ENST00000522778 PLCD3Q8N3E9 789 aa16.2■□□□□ 0.18
LINC01609-202ENST00000522778 FBXO3Q9UK99 471 aa16.18■□□□□ 0.18
LINC01609-202ENST00000522778 ZRANB1Q9UGI0 708 aa16.13■□□□□ 0.17
LINC01609-202ENST00000522778 PAK3O75914 559 aaPredicted RBP16.12■□□□□ 0.17
LINC01609-202ENST00000522778 GABBR2O75899 941 aa16.06■□□□□ 0.16
LINC01609-202ENST00000522778 ZNF579Q8NAF0 562 aaKnown RBP16.02■□□□□ 0.16
LINC01609-202ENST00000522778 ZBTB47Q9UFB7 747 aaPredicted RBP16.02■□□□□ 0.16
LINC01609-202ENST00000522778 TSPYL2Q9H2G4 693 aaPredicted RBP15.98■□□□□ 0.15
LINC01609-202ENST00000522778 VASPP50552 380 aaPredicted RBP15.97■□□□□ 0.15
LINC01609-202ENST00000522778 CLCN6P51797 869 aa15.94■□□□□ 0.14
LINC01609-202ENST00000522778 PHF12Q96QT6 1004 aa15.93■□□□□ 0.14
LINC01609-202ENST00000522778 RASEFQ8IZ41 740 aa15.9■□□□□ 0.14
LINC01609-202ENST00000522778 KLHL34Q8N239 644 aa15.85■□□□□ 0.13
LINC01609-202ENST00000522778 NUBP1P53384 320 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms