RNA–Protein interactions for RNA: ENST00000522778.1

LINC01609-202, Transcript of long intergenic non-protein coding RNA 1609, humanhuman

TSL 2 BASIC

Gene LINC01609, Length 566 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01609-202ENST00000522778 AEBP2Q6ZN18 517 aaPredicted RBP31.55■■■□□ 2.64
LINC01609-202ENST00000522778 CHIC1Q5VXU3 224 aa30.36■■■□□ 2.45
LINC01609-202ENST00000522778 SENP3Q9H4L4 574 aaPredicted RBP26.89■■□□□ 1.9
LINC01609-202ENST00000522778 PHF23Q9BUL5 403 aaPredicted RBP26.64■■□□□ 1.86
LINC01609-202ENST00000522778 FOXD1Q16676 465 aa24.98■■□□□ 1.59
LINC01609-202ENST00000522778 PLPPR3Q6T4P5 718 aa24.48■■□□□ 1.51
LINC01609-202ENST00000522778 PPP6R1Q9UPN7 881 aa23.66■■□□□ 1.38
LINC01609-202ENST00000522778 ADRA2BP18089 450 aa23.65■■□□□ 1.38
LINC01609-202ENST00000522778 PIAS4Q8N2W9 510 aaPredicted RBP23.51■■□□□ 1.35
LINC01609-202ENST00000522778 MSH5O43196 834 aa23.25■■□□□ 1.31
LINC01609-202ENST00000522778 POTEDQ86YR6 584 aa21.98■■□□□ 1.11
LINC01609-202ENST00000522778 SCAF1Q9H7N4 1312 aaKnown RBP21.65■■□□□ 1.06
LINC01609-202ENST00000522778 MAPK8IP2Q13387 824 aaPredicted RBP21.59■■□□□ 1.05
LINC01609-202ENST00000522778 PPP4R3CPQ6ZMV5 832 aa21.5■■□□□ 1.03
LINC01609-202ENST00000522778 DMRT2Q9Y5R5 561 aa21.37■■□□□ 1.01
LINC01609-202ENST00000522778 CNKSR2Q8WXI2 1034 aa21.01■□□□□ 0.95
LINC01609-202ENST00000522778 NCBP3Q53F19 620 aaKnown RBP20.83■□□□□ 0.93
LINC01609-202ENST00000522778 HOXD11P31277 338 aaPredicted RBP20.71■□□□□ 0.91
LINC01609-202ENST00000522778 RNF216Q9NWF9 866 aaPredicted RBP20.7■□□□□ 0.9
LINC01609-202ENST00000522778 DCAF8L1A6NGE4 600 aa20.58■□□□□ 0.89
LINC01609-202ENST00000522778 NPM3O75607 178 aaKnown RBP20.5■□□□□ 0.87
LINC01609-202ENST00000522778 KCNA4P22459 653 aa20.49■□□□□ 0.87
LINC01609-202ENST00000522778 DNAJC5BQ9UF47 199 aa19.88■□□□□ 0.77
LINC01609-202ENST00000522778 RNF39Q9H2S5 420 aa19.85■□□□□ 0.77
LINC01609-202ENST00000522778 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.83■□□□□ 0.77
LINC01609-202ENST00000522778 CACNB1Q02641 598 aaPredicted RBP19.74■□□□□ 0.75
LINC01609-202ENST00000522778 C1QBPQ07021 282 aaKnown RBP19.59■□□□□ 0.73
LINC01609-202ENST00000522778 SLC4A1APQ9BWU0 796 aaKnown RBP19.45■□□□□ 0.7
LINC01609-202ENST00000522778 SLC4A2P04920 1241 aa19.44■□□□□ 0.7
LINC01609-202ENST00000522778 U3KPZ7 1027 aaPredicted RBP19.4■□□□□ 0.7
LINC01609-202ENST00000522778 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.03■□□□□ 0.64
LINC01609-202ENST00000522778 HNRNPUL2Q1KMD3 747 aaKnown RBP19.03■□□□□ 0.64
LINC01609-202ENST00000522778 SPINK5Q9NQ38 1064 aaPredicted RBP19.02■□□□□ 0.64
LINC01609-202ENST00000522778 CAPN15O75808 1086 aa19.01■□□□□ 0.63
LINC01609-202ENST00000522778 FOXD4L1Q9NU39 408 aa19■□□□□ 0.63
LINC01609-202ENST00000522778 MYCNP04198 464 aaPredicted RBP18.97■□□□□ 0.63
LINC01609-202ENST00000522778 APLP2Q06481 763 aa18.95■□□□□ 0.62
LINC01609-202ENST00000522778 SAMD1Q6SPF0 538 aaPredicted RBP18.94■□□□□ 0.62
LINC01609-202ENST00000522778 ZBTB22O15209 634 aa18.82■□□□□ 0.6
LINC01609-202ENST00000522778 TRHP20396 242 aaPredicted RBP18.81■□□□□ 0.6
LINC01609-202ENST00000522778 ZNF219Q9P2Y4 722 aaPredicted RBP18.76■□□□□ 0.59
LINC01609-202ENST00000522778 DSG3P32926 999 aa18.74■□□□□ 0.59
LINC01609-202ENST00000522778 ABCB7O75027 752 aa18.61■□□□□ 0.57
LINC01609-202ENST00000522778 ATF5Q9Y2D1 282 aaPredicted RBP18.48■□□□□ 0.55
LINC01609-202ENST00000522778 EHMT2Q96KQ7 1210 aa18.41■□□□□ 0.54
LINC01609-202ENST00000522778 POLA2Q14181 598 aa18.36■□□□□ 0.53
LINC01609-202ENST00000522778 ATXN8OSP0DMR3 200 aa18.34■□□□□ 0.53
LINC01609-202ENST00000522778 CSRNP3Q8WYN3 585 aa18.32■□□□□ 0.52
LINC01609-202ENST00000522778 ZBTB12Q9Y330 459 aaPredicted RBP18.03■□□□□ 0.48
LINC01609-202ENST00000522778 RBM42Q9BTD8 480 aaKnown RBP17.91■□□□□ 0.46
LINC01609-202ENST00000522778 OSCARQ8IYS5 282 aa17.79■□□□□ 0.44
LINC01609-202ENST00000522778 FBLN2P98095 1184 aa17.78■□□□□ 0.44
LINC01609-202ENST00000522778 MKRN4PQ13434 485 aaPredicted RBP17.63■□□□□ 0.41
LINC01609-202ENST00000522778 AKT1S1Q96B36 256 aa17.56■□□□□ 0.4
LINC01609-202ENST00000522778 SPDYE2BA6NHP3 402 aa17.49■□□□□ 0.39
LINC01609-202ENST00000522778 SPDYE6P0CI01 402 aa17.49■□□□□ 0.39
LINC01609-202ENST00000522778 SPDYE2Q495Y8 402 aa17.49■□□□□ 0.39
LINC01609-202ENST00000522778 REM2Q8IYK8 340 aaPredicted RBP17.39■□□□□ 0.37
LINC01609-202ENST00000522778 ZNF692Q9BU19 519 aaPredicted RBP17.38■□□□□ 0.37
LINC01609-202ENST00000522778 CHRDL2Q6WN34 429 aa17.34■□□□□ 0.37
LINC01609-202ENST00000522778 POTEHQ6S545 545 aa17.33■□□□□ 0.36
LINC01609-202ENST00000522778 SSUH2Q9Y2M2 353 aa17.28■□□□□ 0.36
LINC01609-202ENST00000522778 PITPNM1O00562 1244 aa17.22■□□□□ 0.35
LINC01609-202ENST00000522778 PABPN1Q86U42 306 aaKnown RBP eCLIP17.14■□□□□ 0.33
LINC01609-202ENST00000522778 SPDYE1Q8NFV5 336 aaPredicted RBP17.1■□□□□ 0.33
LINC01609-202ENST00000522778 CLEC11AQ9Y240 323 aa17.1■□□□□ 0.33
LINC01609-202ENST00000522778 SPDYE4A6NLX3 237 aa17.07■□□□□ 0.32
LINC01609-202ENST00000522778 PIP4P2Q8N4L2 257 aa17.01■□□□□ 0.31
LINC01609-202ENST00000522778 FXR2P51116 673 aaKnown RBP eCLIP16.94■□□□□ 0.3
LINC01609-202ENST00000522778 PRR29P0C7W0 189 aa16.85■□□□□ 0.29
LINC01609-202ENST00000522778 PRKAR2AP13861 404 aaKnown RBP16.8■□□□□ 0.28
LINC01609-202ENST00000522778 STAG3Q9UJ98 1225 aa16.73■□□□□ 0.27
LINC01609-202ENST00000522778 CHADLQ6NUI6 762 aa16.7■□□□□ 0.26
LINC01609-202ENST00000522778 FKBP8Q14318 412 aa16.66■□□□□ 0.26
LINC01609-202ENST00000522778 HAX1O00165 279 aa16.63■□□□□ 0.25
LINC01609-202ENST00000522778 PROM2Q8N271 834 aa16.63■□□□□ 0.25
LINC01609-202ENST00000522778 CREBZFQ9NS37 354 aa16.48■□□□□ 0.23
LINC01609-202ENST00000522778 FARP1Q9Y4F1 1045 aaPredicted RBP16.47■□□□□ 0.23
LINC01609-202ENST00000522778 SP7Q8TDD2 431 aaPredicted RBP16.44■□□□□ 0.22
LINC01609-202ENST00000522778 C19orf67A6NJJ6 358 aa16.39■□□□□ 0.21
LINC01609-202ENST00000522778 EVX2Q03828 476 aa16.39■□□□□ 0.21
LINC01609-202ENST00000522778 CD44P16070 742 aaKnown RBP16.3■□□□□ 0.2
LINC01609-202ENST00000522778 PLEKHG5O94827 1062 aa16.25■□□□□ 0.19
LINC01609-202ENST00000522778 MIER1Q8N108 512 aa16.25■□□□□ 0.19
LINC01609-202ENST00000522778 NPM1P06748 294 aaKnown RBP eCLIP16.24■□□□□ 0.19
LINC01609-202ENST00000522778 MNX1P50219 401 aaPredicted RBP16.21■□□□□ 0.19
LINC01609-202ENST00000522778 PLCD3Q8N3E9 789 aa16.2■□□□□ 0.18
LINC01609-202ENST00000522778 FBXO3Q9UK99 471 aa16.18■□□□□ 0.18
LINC01609-202ENST00000522778 ZRANB1Q9UGI0 708 aa16.13■□□□□ 0.17
LINC01609-202ENST00000522778 PAK3O75914 559 aaPredicted RBP16.12■□□□□ 0.17
LINC01609-202ENST00000522778 GABBR2O75899 941 aa16.06■□□□□ 0.16
LINC01609-202ENST00000522778 ZNF579Q8NAF0 562 aaKnown RBP16.02■□□□□ 0.16
LINC01609-202ENST00000522778 ZBTB47Q9UFB7 747 aaPredicted RBP16.02■□□□□ 0.16
LINC01609-202ENST00000522778 TSPYL2Q9H2G4 693 aaPredicted RBP15.98■□□□□ 0.15
LINC01609-202ENST00000522778 VASPP50552 380 aaPredicted RBP15.97■□□□□ 0.15
LINC01609-202ENST00000522778 CLCN6P51797 869 aa15.94■□□□□ 0.14
LINC01609-202ENST00000522778 PHF12Q96QT6 1004 aa15.93■□□□□ 0.14
LINC01609-202ENST00000522778 RASEFQ8IZ41 740 aa15.9■□□□□ 0.14
LINC01609-202ENST00000522778 KLHL34Q8N239 644 aa15.85■□□□□ 0.13
LINC01609-202ENST00000522778 NUBP1P53384 320 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms