RNA–Protein interactions for RNA: ENST00000522684.5

PTK2-240, Transcript of protein tyrosine kinase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTK2, Length 4,955 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK2-240ENST00000522684 NISCHQ9Y2I1 1504 aa15.98■□□□□ 0.15
PTK2-240ENST00000522684 SHROOM4Q9ULL8 1493 aa13.96□□□□□ -0.17
PTK2-240ENST00000522684 SUPT5HO00267 1087 aaKnown RBP13.61□□□□□ -0.23
PTK2-240ENST00000522684 DCAF8L2P0C7V8 631 aa13.56□□□□□ -0.24
PTK2-240ENST00000522684 ZCCHC6Q5VYS8 1495 aaKnown RBP13.5□□□□□ -0.25
PTK2-240ENST00000522684 CCDC180Q9P1Z9 1646 aa13.39□□□□□ -0.27
PTK2-240ENST00000522684 MYO15BQ96JP2 1530 aa13.19□□□□□ -0.3
PTK2-240ENST00000522684 CHIC1Q5VXU3 224 aa13.12□□□□□ -0.31
PTK2-240ENST00000522684 DCAF1Q9Y4B6 1507 aa12.91□□□□□ -0.34
PTK2-240ENST00000522684 LOC105371045A0A1W2PR82 267 aa12.91□□□□□ -0.34
PTK2-240ENST00000522684 SCRIBQ14160 1630 aa12.86□□□□□ -0.35
PTK2-240ENST00000522684 ABCC9O60706 1549 aa12.81□□□□□ -0.36
PTK2-240ENST00000522684 PCGF6Q9BYE7 350 aa12.8□□□□□ -0.36
PTK2-240ENST00000522684 HRCP23327 699 aa12.72□□□□□ -0.37
PTK2-240ENST00000522684 PPARGC1BQ86YN6 1023 aaKnown RBP12.72□□□□□ -0.37
PTK2-240ENST00000522684 RSF1Q96T23 1441 aaPredicted RBP12.72□□□□□ -0.37
PTK2-240ENST00000522684 EHMT2Q96KQ7 1210 aa12.7□□□□□ -0.38
PTK2-240ENST00000522684 CECR2Q9BXF3 1484 aa12.67□□□□□ -0.38
PTK2-240ENST00000522684 FAM9AQ8IZU1 332 aaPredicted RBP12.64□□□□□ -0.39
PTK2-240ENST00000522684 RB1CC1Q8TDY2 1594 aa12.64□□□□□ -0.39
PTK2-240ENST00000522684 MROH2BQ7Z745 1585 aa12.55□□□□□ -0.4
PTK2-240ENST00000522684 TRIM41Q8WV44 630 aa12.52□□□□□ -0.41
PTK2-240ENST00000522684 WIZO95785 1651 aa12.49□□□□□ -0.41
PTK2-240ENST00000522684 NACADO15069 1562 aa12.43□□□□□ -0.42
PTK2-240ENST00000522684 PABPN1Q86U42 306 aaKnown RBP eCLIP12.36□□□□□ -0.43
PTK2-240ENST00000522684 TRIM26Q12899 539 aaPredicted RBP12.34□□□□□ -0.43
PTK2-240ENST00000522684 ABCC8Q09428 1581 aa12.26□□□□□ -0.45
PTK2-240ENST00000522684 UNC13AQ9UPW8 1703 aa12.26□□□□□ -0.45
PTK2-240ENST00000522684 TTBK1Q5TCY1 1321 aaPredicted RBP12.23□□□□□ -0.45
PTK2-240ENST00000522684 BAZ1AQ9NRL2 1556 aaPredicted RBP12.22□□□□□ -0.45
PTK2-240ENST00000522684 EIF4G1Q04637 1599 aaKnown RBP12.21□□□□□ -0.45
PTK2-240ENST00000522684 CCDC88BA6NC98 1476 aa12.2□□□□□ -0.46
PTK2-240ENST00000522684 SMARCA4P51532 1647 aa12.17□□□□□ -0.46
PTK2-240ENST00000522684 RUSC2Q8N2Y8 1516 aa12.15□□□□□ -0.46
PTK2-240ENST00000522684 SOGA1O94964 1423 aa12.14□□□□□ -0.47
PTK2-240ENST00000522684 SMARCA2P51531 1590 aa12.13□□□□□ -0.47
PTK2-240ENST00000522684 BICRAQ9NZM4 1560 aa12.13□□□□□ -0.47
PTK2-240ENST00000522684 TOP2AP11388 1531 aaKnown RBP12.11□□□□□ -0.47
PTK2-240ENST00000522684 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.07□□□□□ -0.48
PTK2-240ENST00000522684 RANGAP1P46060 587 aaPredicted RBP11.97□□□□□ -0.49
PTK2-240ENST00000522684 CEP162Q5TB80 1403 aa11.95□□□□□ -0.5
PTK2-240ENST00000522684 UBTFP17480 764 aaKnown RBP11.95□□□□□ -0.5
PTK2-240ENST00000522684 ZEB1P37275 1124 aaPredicted RBP11.95□□□□□ -0.5
PTK2-240ENST00000522684 CSRNP3Q8WYN3 585 aa11.94□□□□□ -0.5
PTK2-240ENST00000522684 SYNJ1O43426 1573 aa11.92□□□□□ -0.5
PTK2-240ENST00000522684 ATAD2BQ9ULI0 1458 aa11.91□□□□□ -0.5
PTK2-240ENST00000522684 SCAF1Q9H7N4 1312 aaKnown RBP11.9□□□□□ -0.5
PTK2-240ENST00000522684 CCER1Q8TC90 406 aaPredicted RBP11.9□□□□□ -0.5
PTK2-240ENST00000522684 WRNQ14191 1432 aaPredicted RBP eCLIP11.89□□□□□ -0.51
PTK2-240ENST00000522684 TNIKQ9UKE5 1360 aa11.84□□□□□ -0.51
PTK2-240ENST00000522684 PEG3Q9GZU2 1588 aa11.83□□□□□ -0.52
PTK2-240ENST00000522684 BAZ1BQ9UIG0 1483 aaKnown RBP11.83□□□□□ -0.52
PTK2-240ENST00000522684 RAPGEF2Q9Y4G8 1499 aa11.8□□□□□ -0.52
PTK2-240ENST00000522684 HNRNPUL2Q1KMD3 747 aaKnown RBP11.77□□□□□ -0.53
PTK2-240ENST00000522684 GOLGA3Q08378 1498 aa11.76□□□□□ -0.53
PTK2-240ENST00000522684 NEUROD1Q13562 356 aa11.74□□□□□ -0.53
PTK2-240ENST00000522684 CLIP1P30622 1438 aa11.7□□□□□ -0.54
PTK2-240ENST00000522684 EEA1Q15075 1411 aa11.7□□□□□ -0.54
PTK2-240ENST00000522684 DIEXFQ68CQ4 756 aaKnown RBP11.7□□□□□ -0.54
PTK2-240ENST00000522684 CEP164Q9UPV0 1460 aa11.68□□□□□ -0.54
PTK2-240ENST00000522684 KANK4Q5T7N3 995 aaPredicted RBP11.65□□□□□ -0.54
PTK2-240ENST00000522684 CUX1P39880 1505 aa11.65□□□□□ -0.54
PTK2-240ENST00000522684 KIF21BO75037 1637 aa11.64□□□□□ -0.55
PTK2-240ENST00000522684 TOP2BQ02880 1626 aa11.64□□□□□ -0.55
PTK2-240ENST00000522684 ACIN1Q9UKV3 1341 aaKnown RBP11.64□□□□□ -0.55
PTK2-240ENST00000522684 VPS8Q8N3P4 1428 aa11.61□□□□□ -0.55
PTK2-240ENST00000522684 YTHDC1Q96MU7 727 aaKnown RBP11.61□□□□□ -0.55
PTK2-240ENST00000522684 GTF3C3Q9Y5Q9 886 aa11.6□□□□□ -0.55
PTK2-240ENST00000522684 NCAPD3P42695 1498 aa11.6□□□□□ -0.55
PTK2-240ENST00000522684 ARAP1Q96P48 1450 aa11.58□□□□□ -0.56
PTK2-240ENST00000522684 DNAJC5BQ9UF47 199 aa11.57□□□□□ -0.56
PTK2-240ENST00000522684 PRXQ9BXM0 1461 aa11.57□□□□□ -0.56
PTK2-240ENST00000522684 BIVM-ERCC5R4GMW8 1640 aa11.56□□□□□ -0.56
PTK2-240ENST00000522684 CFTRP13569 1480 aa11.54□□□□□ -0.56
PTK2-240ENST00000522684 ZNF316A6NFI3 1004 aaPredicted RBP11.53□□□□□ -0.56
PTK2-240ENST00000522684 HMGXB3Q12766 1538 aa11.52□□□□□ -0.57
PTK2-240ENST00000522684 ITGAEP38570 1179 aa11.52□□□□□ -0.57
PTK2-240ENST00000522684 MIER1Q8N108 512 aa11.52□□□□□ -0.57
PTK2-240ENST00000522684 APLP2Q06481 763 aa11.5□□□□□ -0.57
PTK2-240ENST00000522684 P3H3Q8IVL6 736 aa11.5□□□□□ -0.57
PTK2-240ENST00000522684 ARHGAP35Q9NRY4 1499 aa11.47□□□□□ -0.57
PTK2-240ENST00000522684 CUX2O14529 1486 aa11.47□□□□□ -0.57
PTK2-240ENST00000522684 IGF1RP08069 1367 aa11.47□□□□□ -0.57
PTK2-240ENST00000522684 KIF27Q86VH2 1401 aa11.47□□□□□ -0.57
PTK2-240ENST00000522684 NESP48681 1621 aa11.46□□□□□ -0.57
PTK2-240ENST00000522684 CENPBP07199 599 aaPredicted RBP11.44□□□□□ -0.58
PTK2-240ENST00000522684 ERICH3Q5RHP9 1530 aa11.43□□□□□ -0.58
PTK2-240ENST00000522684 CADPSQ9ULU8 1353 aa11.43□□□□□ -0.58
PTK2-240ENST00000522684 FGD5Q6ZNL6 1462 aa11.42□□□□□ -0.58
PTK2-240ENST00000522684 RAD54L2Q9Y4B4 1467 aa11.42□□□□□ -0.58
PTK2-240ENST00000522684 CC2D2AQ9P2K1 1620 aa11.42□□□□□ -0.58
PTK2-240ENST00000522684 DHX57Q6P158 1386 aaKnown RBP11.41□□□□□ -0.58
PTK2-240ENST00000522684 ATP1B4Q9UN42 357 aaPredicted RBP11.39□□□□□ -0.59
PTK2-240ENST00000522684 CARMIL1Q5VZK9 1371 aa11.37□□□□□ -0.59
PTK2-240ENST00000522684 PELP1Q8IZL8 1130 aaKnown RBP11.36□□□□□ -0.59
PTK2-240ENST00000522684 FANCD2Q9BXW9 1451 aa11.34□□□□□ -0.59
PTK2-240ENST00000522684 PHLDB1Q86UU1 1377 aa11.33□□□□□ -0.6
PTK2-240ENST00000522684 RRBP1Q9P2E9 1410 aaKnown RBP11.32□□□□□ -0.6
PTK2-240ENST00000522684 CCNB3Q8WWL7 1395 aa11.32□□□□□ -0.6
PTK2-240ENST00000522684 FHOD3Q2V2M9 1422 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms