RNA–Protein interactions for RNA: ENST00000522226.5

TNIP1-214, Transcript of TNFAIP3 interacting protein 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene TNIP1, Length 2,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-214ENST00000522226 NISCHQ9Y2I1 1504 aa30.51■■■□□ 2.48
TNIP1-214ENST00000522226 CCDC180Q9P1Z9 1646 aa26.3■■□□□ 1.8
TNIP1-214ENST00000522226 SHROOM4Q9ULL8 1493 aa25.97■■□□□ 1.75
TNIP1-214ENST00000522226 ZCCHC6Q5VYS8 1495 aaKnown RBP25.73■■□□□ 1.71
TNIP1-214ENST00000522226 SUPT5HO00267 1087 aaKnown RBP25.56■■□□□ 1.68
TNIP1-214ENST00000522226 DCAF1Q9Y4B6 1507 aa25.18■■□□□ 1.62
TNIP1-214ENST00000522226 DCAF8L2P0C7V8 631 aa25.18■■□□□ 1.62
TNIP1-214ENST00000522226 CHIC1Q5VXU3 224 aa24.89■■□□□ 1.57
TNIP1-214ENST00000522226 MYO15BQ96JP2 1530 aa24.87■■□□□ 1.57
TNIP1-214ENST00000522226 ABCC9O60706 1549 aa24.52■■□□□ 1.52
TNIP1-214ENST00000522226 HRCP23327 699 aa24.45■■□□□ 1.5
TNIP1-214ENST00000522226 NACADO15069 1562 aa24.41■■□□□ 1.5
TNIP1-214ENST00000522226 PCGF6Q9BYE7 350 aa24.37■■□□□ 1.49
TNIP1-214ENST00000522226 SCRIBQ14160 1630 aa24.35■■□□□ 1.49
TNIP1-214ENST00000522226 LOC105371045A0A1W2PR82 267 aa24.25■■□□□ 1.47
TNIP1-214ENST00000522226 RB1CC1Q8TDY2 1594 aa24.08■■□□□ 1.45
TNIP1-214ENST00000522226 PPARGC1BQ86YN6 1023 aaKnown RBP24.02■■□□□ 1.44
TNIP1-214ENST00000522226 RSF1Q96T23 1441 aaPredicted RBP23.93■■□□□ 1.42
TNIP1-214ENST00000522226 TRIM26Q12899 539 aaPredicted RBP23.79■■□□□ 1.4
TNIP1-214ENST00000522226 TRIM41Q8WV44 630 aa23.74■■□□□ 1.39
TNIP1-214ENST00000522226 CECR2Q9BXF3 1484 aa23.71■■□□□ 1.39
TNIP1-214ENST00000522226 FAM9AQ8IZU1 332 aaPredicted RBP23.64■■□□□ 1.37
TNIP1-214ENST00000522226 UNC13AQ9UPW8 1703 aa23.63■■□□□ 1.37
TNIP1-214ENST00000522226 MROH2BQ7Z745 1585 aa23.62■■□□□ 1.37
TNIP1-214ENST00000522226 BAZ1AQ9NRL2 1556 aaPredicted RBP23.52■■□□□ 1.36
TNIP1-214ENST00000522226 EHMT2Q96KQ7 1210 aa23.5■■□□□ 1.35
TNIP1-214ENST00000522226 WIZO95785 1651 aa23.45■■□□□ 1.35
TNIP1-214ENST00000522226 BICRAQ9NZM4 1560 aa23.36■■□□□ 1.33
TNIP1-214ENST00000522226 SMARCA4P51532 1647 aa23.34■■□□□ 1.33
TNIP1-214ENST00000522226 ZEB1P37275 1124 aaPredicted RBP23.3■■□□□ 1.32
TNIP1-214ENST00000522226 PABPN1Q86U42 306 aaKnown RBP eCLIP23.28■■□□□ 1.32
TNIP1-214ENST00000522226 TOP2AP11388 1531 aaKnown RBP23.19■■□□□ 1.3
TNIP1-214ENST00000522226 EIF4G1Q04637 1599 aaKnown RBP23.05■■□□□ 1.28
TNIP1-214ENST00000522226 PEG3Q9GZU2 1588 aa23■■□□□ 1.27
TNIP1-214ENST00000522226 SMARCA2P51531 1590 aa23■■□□□ 1.27
TNIP1-214ENST00000522226 CCDC88BA6NC98 1476 aa23■■□□□ 1.27
TNIP1-214ENST00000522226 ABCC8Q09428 1581 aa22.92■■□□□ 1.26
TNIP1-214ENST00000522226 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.88■■□□□ 1.25
TNIP1-214ENST00000522226 ATAD2BQ9ULI0 1458 aa22.84■■□□□ 1.25
TNIP1-214ENST00000522226 CCER1Q8TC90 406 aaPredicted RBP22.8■■□□□ 1.24
TNIP1-214ENST00000522226 TTBK1Q5TCY1 1321 aaPredicted RBP22.77■■□□□ 1.24
TNIP1-214ENST00000522226 SOGA1O94964 1423 aa22.76■■□□□ 1.23
TNIP1-214ENST00000522226 BAZ1BQ9UIG0 1483 aaKnown RBP22.76■■□□□ 1.23
TNIP1-214ENST00000522226 CEP162Q5TB80 1403 aa22.7■■□□□ 1.22
TNIP1-214ENST00000522226 SCAF1Q9H7N4 1312 aaKnown RBP22.7■■□□□ 1.22
TNIP1-214ENST00000522226 WRNQ14191 1432 aaPredicted RBP eCLIP22.68■■□□□ 1.22
TNIP1-214ENST00000522226 RUSC2Q8N2Y8 1516 aa22.65■■□□□ 1.22
TNIP1-214ENST00000522226 TNIKQ9UKE5 1360 aa22.63■■□□□ 1.21
TNIP1-214ENST00000522226 CSRNP3Q8WYN3 585 aa22.63■■□□□ 1.21
TNIP1-214ENST00000522226 UBTFP17480 764 aaKnown RBP22.6■■□□□ 1.21
TNIP1-214ENST00000522226 NCAPD3P42695 1498 aa22.54■■□□□ 1.2
TNIP1-214ENST00000522226 EEA1Q15075 1411 aa22.54■■□□□ 1.2
TNIP1-214ENST00000522226 HMGXB3Q12766 1538 aa22.54■■□□□ 1.2
TNIP1-214ENST00000522226 PELP1Q8IZL8 1130 aaKnown RBP22.5■■□□□ 1.19
TNIP1-214ENST00000522226 GOLGA3Q08378 1498 aa22.45■■□□□ 1.18
TNIP1-214ENST00000522226 DIEXFQ68CQ4 756 aaKnown RBP22.45■■□□□ 1.18
TNIP1-214ENST00000522226 ACIN1Q9UKV3 1341 aaKnown RBP22.38■■□□□ 1.17
TNIP1-214ENST00000522226 NEUROD1Q13562 356 aa22.37■■□□□ 1.17
TNIP1-214ENST00000522226 SYNJ1O43426 1573 aa22.36■■□□□ 1.17
TNIP1-214ENST00000522226 CEP164Q9UPV0 1460 aa22.3■■□□□ 1.16
TNIP1-214ENST00000522226 HNRNPUL2Q1KMD3 747 aaKnown RBP22.25■■□□□ 1.15
TNIP1-214ENST00000522226 KIF21BO75037 1637 aa22.24■■□□□ 1.15
TNIP1-214ENST00000522226 CLIP1P30622 1438 aa22.24■■□□□ 1.15
TNIP1-214ENST00000522226 ZNF316A6NFI3 1004 aaPredicted RBP22.22■■□□□ 1.15
TNIP1-214ENST00000522226 TOP2BQ02880 1626 aa22.21■■□□□ 1.15
TNIP1-214ENST00000522226 CFTRP13569 1480 aa22.2■■□□□ 1.14
TNIP1-214ENST00000522226 RANGAP1P46060 587 aaPredicted RBP22.19■■□□□ 1.14
TNIP1-214ENST00000522226 CENPBP07199 599 aaPredicted RBP22.18■■□□□ 1.14
TNIP1-214ENST00000522226 RAPGEF2Q9Y4G8 1499 aa22.17■■□□□ 1.14
TNIP1-214ENST00000522226 CC2D2AQ9P2K1 1620 aa22.17■■□□□ 1.14
TNIP1-214ENST00000522226 GTF3C3Q9Y5Q9 886 aa22.16■■□□□ 1.14
TNIP1-214ENST00000522226 BIVM-ERCC5R4GMW8 1640 aa22.15■■□□□ 1.14
TNIP1-214ENST00000522226 VPS8Q8N3P4 1428 aa22.14■■□□□ 1.14
TNIP1-214ENST00000522226 APLP2Q06481 763 aa22.1■■□□□ 1.13
TNIP1-214ENST00000522226 PRDM2Q13029 1718 aa22.06■■□□□ 1.12
TNIP1-214ENST00000522226 CUX1P39880 1505 aa22.04■■□□□ 1.12
TNIP1-214ENST00000522226 CADPSQ9ULU8 1353 aa22.04■■□□□ 1.12
TNIP1-214ENST00000522226 YTHDC1Q96MU7 727 aaKnown RBP21.99■■□□□ 1.11
TNIP1-214ENST00000522226 MIER1Q8N108 512 aa21.97■■□□□ 1.11
TNIP1-214ENST00000522226 PRXQ9BXM0 1461 aa21.88■■□□□ 1.09
TNIP1-214ENST00000522226 KIF27Q86VH2 1401 aa21.87■■□□□ 1.09
TNIP1-214ENST00000522226 ARAP1Q96P48 1450 aa21.86■■□□□ 1.09
TNIP1-214ENST00000522226 KANK4Q5T7N3 995 aaPredicted RBP21.85■■□□□ 1.09
TNIP1-214ENST00000522226 ERICH3Q5RHP9 1530 aa21.84■■□□□ 1.09
TNIP1-214ENST00000522226 FANCD2Q9BXW9 1451 aa21.79■■□□□ 1.08
TNIP1-214ENST00000522226 DHX57Q6P158 1386 aaKnown RBP21.77■■□□□ 1.08
TNIP1-214ENST00000522226 FGD5Q6ZNL6 1462 aa21.73■■□□□ 1.07
TNIP1-214ENST00000522226 CUX2O14529 1486 aa21.71■■□□□ 1.07
TNIP1-214ENST00000522226 NESP48681 1621 aa21.69■■□□□ 1.06
TNIP1-214ENST00000522226 CLSPNQ9HAW4 1339 aa21.69■■□□□ 1.06
TNIP1-214ENST00000522226 LAMC3Q9Y6N6 1575 aa21.68■■□□□ 1.06
TNIP1-214ENST00000522226 DNMBPQ6XZF7 1577 aa21.66■■□□□ 1.06
TNIP1-214ENST00000522226 RRBP1Q9P2E9 1410 aaKnown RBP21.65■■□□□ 1.06
TNIP1-214ENST00000522226 ARHGAP35Q9NRY4 1499 aa21.64■■□□□ 1.05
TNIP1-214ENST00000522226 IGF1RP08069 1367 aa21.63■■□□□ 1.05
TNIP1-214ENST00000522226 ITGAEP38570 1179 aa21.61■■□□□ 1.05
TNIP1-214ENST00000522226 TOPBP1Q92547 1522 aa21.61■■□□□ 1.05
TNIP1-214ENST00000522226 CCNB3Q8WWL7 1395 aa21.58■■□□□ 1.05
TNIP1-214ENST00000522226 POLA1P09884 1462 aaPredicted RBP21.55■■□□□ 1.04
TNIP1-214ENST00000522226 CARMIL1Q5VZK9 1371 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 323.6 ms