RNA–Protein interactions for RNA: ENST00000522178.1

VDAC3-210, Transcript of voltage dependent anion channel 3, humanhuman

TSL 3

Gene VDAC3, Length 272 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDAC3-210ENST00000522178 AEBP2Q6ZN18 517 aaPredicted RBP28.96■■■□□ 2.23
VDAC3-210ENST00000522178 CHIC1Q5VXU3 224 aa28.85■■■□□ 2.21
VDAC3-210ENST00000522178 PHF23Q9BUL5 403 aaPredicted RBP25.37■■□□□ 1.65
VDAC3-210ENST00000522178 SENP3Q9H4L4 574 aaPredicted RBP24.59■■□□□ 1.53
VDAC3-210ENST00000522178 PLPPR3Q6T4P5 718 aa23.68■■□□□ 1.38
VDAC3-210ENST00000522178 FOXD1Q16676 465 aa22.69■■□□□ 1.22
VDAC3-210ENST00000522178 ADRA2BP18089 450 aa22.2■■□□□ 1.14
VDAC3-210ENST00000522178 PPP6R1Q9UPN7 881 aa22.19■■□□□ 1.14
VDAC3-210ENST00000522178 PIAS4Q8N2W9 510 aaPredicted RBP21.53■■□□□ 1.04
VDAC3-210ENST00000522178 KCNA4P22459 653 aa20.93■□□□□ 0.94
VDAC3-210ENST00000522178 PPP4R3CPQ6ZMV5 832 aa20.89■□□□□ 0.93
VDAC3-210ENST00000522178 MSH5O43196 834 aa20.81■□□□□ 0.92
VDAC3-210ENST00000522178 NCBP3Q53F19 620 aaKnown RBP20.55■□□□□ 0.88
VDAC3-210ENST00000522178 SCAF1Q9H7N4 1312 aaKnown RBP20.44■□□□□ 0.86
VDAC3-210ENST00000522178 CNKSR2Q8WXI2 1034 aa20.23■□□□□ 0.83
VDAC3-210ENST00000522178 NPM3O75607 178 aaKnown RBP20.18■□□□□ 0.82
VDAC3-210ENST00000522178 SLC4A1APQ9BWU0 796 aaKnown RBP20.05■□□□□ 0.8
VDAC3-210ENST00000522178 EHMT2Q96KQ7 1210 aa19.99■□□□□ 0.79
VDAC3-210ENST00000522178 MAPK8IP2Q13387 824 aaPredicted RBP19.97■□□□□ 0.79
VDAC3-210ENST00000522178 RNF216Q9NWF9 866 aaPredicted RBP19.72■□□□□ 0.75
VDAC3-210ENST00000522178 DMRT2Q9Y5R5 561 aa19.69■□□□□ 0.74
VDAC3-210ENST00000522178 DNAJC5BQ9UF47 199 aa19.65■□□□□ 0.74
VDAC3-210ENST00000522178 CSRNP3Q8WYN3 585 aa19.58■□□□□ 0.72
VDAC3-210ENST00000522178 HOXD11P31277 338 aaPredicted RBP19.5■□□□□ 0.71
VDAC3-210ENST00000522178 ZBTB22O15209 634 aa19.24■□□□□ 0.67
VDAC3-210ENST00000522178 FOXD4L1Q9NU39 408 aa19.18■□□□□ 0.66
VDAC3-210ENST00000522178 SLC4A2P04920 1241 aa18.92■□□□□ 0.62
VDAC3-210ENST00000522178 DCAF8L1A6NGE4 600 aa18.74■□□□□ 0.59
VDAC3-210ENST00000522178 MYCNP04198 464 aaPredicted RBP18.68■□□□□ 0.58
VDAC3-210ENST00000522178 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.54■□□□□ 0.568e-6■□□□□ 10.7
VDAC3-210ENST00000522178 ATXN8OSP0DMR3 200 aa18.52■□□□□ 0.56
VDAC3-210ENST00000522178 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.33■□□□□ 0.52
VDAC3-210ENST00000522178 HNRNPUL2Q1KMD3 747 aaKnown RBP18.33■□□□□ 0.52
VDAC3-210ENST00000522178 U3KPZ7 1027 aaPredicted RBP18.29■□□□□ 0.52
VDAC3-210ENST00000522178 SAMD1Q6SPF0 538 aaPredicted RBP18.26■□□□□ 0.51
VDAC3-210ENST00000522178 APLP2Q06481 763 aa18.05■□□□□ 0.48
VDAC3-210ENST00000522178 ATF5Q9Y2D1 282 aaPredicted RBP18.04■□□□□ 0.48
VDAC3-210ENST00000522178 POTEDQ86YR6 584 aa18■□□□□ 0.47
VDAC3-210ENST00000522178 RNF39Q9H2S5 420 aa17.84■□□□□ 0.45
VDAC3-210ENST00000522178 ZNF219Q9P2Y4 722 aaPredicted RBP17.77■□□□□ 0.44
VDAC3-210ENST00000522178 C1QBPQ07021 282 aaKnown RBP17.7■□□□□ 0.42
VDAC3-210ENST00000522178 FKBP8Q14318 412 aa17.67■□□□□ 0.42
VDAC3-210ENST00000522178 SPINK5Q9NQ38 1064 aaPredicted RBP17.59■□□□□ 0.41
VDAC3-210ENST00000522178 TRHP20396 242 aaPredicted RBP17.56■□□□□ 0.4
VDAC3-210ENST00000522178 CAPN15O75808 1086 aa17.53■□□□□ 0.4
VDAC3-210ENST00000522178 POLA2Q14181 598 aa17.4■□□□□ 0.38
VDAC3-210ENST00000522178 FBLN2P98095 1184 aa17.36■□□□□ 0.37
VDAC3-210ENST00000522178 MKRN4PQ13434 485 aaPredicted RBP17.31■□□□□ 0.36
VDAC3-210ENST00000522178 ZBTB12Q9Y330 459 aaPredicted RBP17.25■□□□□ 0.35
VDAC3-210ENST00000522178 SPDYE4A6NLX3 237 aa17.2■□□□□ 0.34
VDAC3-210ENST00000522178 ABCB7O75027 752 aa17.2■□□□□ 0.34
VDAC3-210ENST00000522178 DSG3P32926 999 aa17.14■□□□□ 0.33
VDAC3-210ENST00000522178 AMER1Q5JTC6 1135 aaPredicted RBP17.06■□□□□ 0.32
VDAC3-210ENST00000522178 PROM2Q8N271 834 aa17.03■□□□□ 0.32
VDAC3-210ENST00000522178 FBXO3Q9UK99 471 aa17■□□□□ 0.31
VDAC3-210ENST00000522178 CACNB1Q02641 598 aaPredicted RBP16.99■□□□□ 0.31
VDAC3-210ENST00000522178 RTN4Q9NQC3 1192 aaKnown RBP16.92■□□□□ 0.3
VDAC3-210ENST00000522178 SPDYE2BA6NHP3 402 aa16.8■□□□□ 0.28
VDAC3-210ENST00000522178 SPDYE6P0CI01 402 aa16.8■□□□□ 0.28
VDAC3-210ENST00000522178 SPDYE2Q495Y8 402 aa16.8■□□□□ 0.28
VDAC3-210ENST00000522178 OSCARQ8IYS5 282 aa16.77■□□□□ 0.28
VDAC3-210ENST00000522178 ZNF692Q9BU19 519 aaPredicted RBP16.77■□□□□ 0.28
VDAC3-210ENST00000522178 SSUH2Q9Y2M2 353 aa16.7■□□□□ 0.26
VDAC3-210ENST00000522178 VASPP50552 380 aaPredicted RBP16.68■□□□□ 0.26
VDAC3-210ENST00000522178 PABPN1Q86U42 306 aaKnown RBP eCLIP16.54■□□□□ 0.24
VDAC3-210ENST00000522178 STAG3Q9UJ98 1225 aa16.54■□□□□ 0.24
VDAC3-210ENST00000522178 IFNLR1Q8IU57 520 aaPredicted RBP16.47■□□□□ 0.23
VDAC3-210ENST00000522178 RBM42Q9BTD8 480 aaKnown RBP16.39■□□□□ 0.21
VDAC3-210ENST00000522178 PLCD3Q8N3E9 789 aa16.29■□□□□ 0.2
VDAC3-210ENST00000522178 AKT1S1Q96B36 256 aa16.28■□□□□ 0.2
VDAC3-210ENST00000522178 KLHL34Q8N239 644 aa16.27■□□□□ 0.2
VDAC3-210ENST00000522178 MIER1Q8N108 512 aa16.25■□□□□ 0.19
VDAC3-210ENST00000522178 SPOCK2Q92563 424 aa16.24■□□□□ 0.19
VDAC3-210ENST00000522178 PLEKHG5O94827 1062 aa16.21■□□□□ 0.19
VDAC3-210ENST00000522178 SPDYE1Q8NFV5 336 aaPredicted RBP16.18■□□□□ 0.18
VDAC3-210ENST00000522178 ZBTB47Q9UFB7 747 aaPredicted RBP16.16■□□□□ 0.18
VDAC3-210ENST00000522178 SLC24A1O60721 1099 aa16.15■□□□□ 0.18
VDAC3-210ENST00000522178 PKD2Q13563 968 aa16.11■□□□□ 0.17
VDAC3-210ENST00000522178 REM2Q8IYK8 340 aaPredicted RBP16.07■□□□□ 0.16
VDAC3-210ENST00000522178 CLEC11AQ9Y240 323 aa16.01■□□□□ 0.15
VDAC3-210ENST00000522178 PRR29P0C7W0 189 aa15.98■□□□□ 0.15
VDAC3-210ENST00000522178 ECM2O94769 699 aaPredicted RBP15.94■□□□□ 0.14
VDAC3-210ENST00000522178 DCAF8L2P0C7V8 631 aa15.9■□□□□ 0.14
VDAC3-210ENST00000522178 CREBZFQ9NS37 354 aa15.87■□□□□ 0.13
VDAC3-210ENST00000522178 PITPNM1O00562 1244 aa15.86■□□□□ 0.13
VDAC3-210ENST00000522178 CIZ1Q9ULV3 898 aaPredicted RBP15.86■□□□□ 0.13
VDAC3-210ENST00000522178 TRIM41Q8WV44 630 aa15.84■□□□□ 0.13
VDAC3-210ENST00000522178 GSE1Q14687 1217 aa15.8■□□□□ 0.12
VDAC3-210ENST00000522178 NUBP1P53384 320 aa15.79■□□□□ 0.12
VDAC3-210ENST00000522178 MNX1P50219 401 aaPredicted RBP15.77■□□□□ 0.12
VDAC3-210ENST00000522178 RGL2O15211 777 aa15.74■□□□□ 0.11
VDAC3-210ENST00000522178 PLCB2Q00722 1185 aa15.73■□□□□ 0.11
VDAC3-210ENST00000522178 NPM1P06748 294 aaKnown RBP eCLIP15.69■□□□□ 0.1
VDAC3-210ENST00000522178 DCAF8Q5TAQ9 597 aa15.68■□□□□ 0.1
VDAC3-210ENST00000522178 FAM212AQ96EL1 285 aa15.68■□□□□ 0.1
VDAC3-210ENST00000522178 BBXQ8WY36 941 aaPredicted RBP15.64■□□□□ 0.09
VDAC3-210ENST00000522178 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.59■□□□□ 0.09
VDAC3-210ENST00000522178 RASEFQ8IZ41 740 aa15.58■□□□□ 0.08
VDAC3-210ENST00000522178 CHRM1P11229 460 aaPredicted RBP15.55■□□□□ 0.08
VDAC3-210ENST00000522178 TAOK2Q9UL54 1235 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms