RNA–Protein interactions for RNA: ENST00000521710.1

NPM1-209, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 386 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-209ENST00000521710 AEBP2Q6ZN18 517 aaPredicted RBP12.62□□□□□ -0.39
NPM1-209ENST00000521710 CHIC1Q5VXU3 224 aa12.43□□□□□ -0.42
NPM1-209ENST00000521710 PHF23Q9BUL5 403 aaPredicted RBP11.04□□□□□ -0.64
NPM1-209ENST00000521710 SENP3Q9H4L4 574 aaPredicted RBP10.71□□□□□ -0.69
NPM1-209ENST00000521710 PLPPR3Q6T4P5 718 aa10.16□□□□□ -0.78
NPM1-209ENST00000521710 FOXD1Q16676 465 aa9.97□□□□□ -0.81
NPM1-209ENST00000521710 PPP6R1Q9UPN7 881 aa9.68□□□□□ -0.86
NPM1-209ENST00000521710 ADRA2BP18089 450 aa9.66□□□□□ -0.86
NPM1-209ENST00000521710 PIAS4Q8N2W9 510 aaPredicted RBP9.32□□□□□ -0.92
NPM1-209ENST00000521710 MSH5O43196 834 aa9.24□□□□□ -0.93
NPM1-209ENST00000521710 KCNA4P22459 653 aa9.14□□□□□ -0.95
NPM1-209ENST00000521710 PPP4R3CPQ6ZMV5 832 aa9.02□□□□□ -0.97
NPM1-209ENST00000521710 POTEDQ86YR6 584 aa8.87□□□□□ -0.99
NPM1-209ENST00000521710 EHMT2Q96KQ7 1210 aa8.77□□□□□ -1.01
NPM1-209ENST00000521710 NPM3O75607 178 aaKnown RBP8.76□□□□□ -1.01
NPM1-209ENST00000521710 NCBP3Q53F19 620 aaKnown RBP8.76□□□□□ -1.01
NPM1-209ENST00000521710 MAPK8IP2Q13387 824 aaPredicted RBP8.71□□□□□ -1.02
NPM1-209ENST00000521710 SLC4A1APQ9BWU0 796 aaKnown RBP8.68□□□□□ -1.02
NPM1-209ENST00000521710 CNKSR2Q8WXI2 1034 aa8.67□□□□□ -1.02
NPM1-209ENST00000521710 SCAF1Q9H7N4 1312 aaKnown RBP8.67□□□□□ -1.02
NPM1-209ENST00000521710 CSRNP3Q8WYN3 585 aa8.56□□□□□ -1.04
NPM1-209ENST00000521710 DMRT2Q9Y5R5 561 aa8.54□□□□□ -1.04
NPM1-209ENST00000521710 ZBTB22O15209 634 aa8.47□□□□□ -1.05
NPM1-209ENST00000521710 RNF216Q9NWF9 866 aaPredicted RBP8.45□□□□□ -1.06
NPM1-209ENST00000521710 DNAJC5BQ9UF47 199 aa8.39□□□□□ -1.07
NPM1-209ENST00000521710 HOXD11P31277 338 aaPredicted RBP8.38□□□□□ -1.07
NPM1-209ENST00000521710 FOXD4L1Q9NU39 408 aa8.27□□□□□ -1.09
NPM1-209ENST00000521710 SLC4A2P04920 1241 aa8.24□□□□□ -1.09
NPM1-209ENST00000521710 DCAF8L1A6NGE4 600 aa8.08□□□□□ -1.12
NPM1-209ENST00000521710 MYCNP04198 464 aaPredicted RBP8.01□□□□□ -1.13
NPM1-209ENST00000521710 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.95□□□□□ -1.147e-37■□□□□ 9.9
NPM1-209ENST00000521710 U3KPZ7 1027 aaPredicted RBP7.93□□□□□ -1.14
NPM1-209ENST00000521710 RNF39Q9H2S5 420 aa7.92□□□□□ -1.14
NPM1-209ENST00000521710 ATXN8OSP0DMR3 200 aa7.91□□□□□ -1.14
NPM1-209ENST00000521710 ATF5Q9Y2D1 282 aaPredicted RBP7.91□□□□□ -1.14
NPM1-209ENST00000521710 C1QBPQ07021 282 aaKnown RBP7.81□□□□□ -1.16
NPM1-209ENST00000521710 SAMD1Q6SPF0 538 aaPredicted RBP7.78□□□□□ -1.16
NPM1-209ENST00000521710 CACNB1Q02641 598 aaPredicted RBP7.77□□□□□ -1.17
NPM1-209ENST00000521710 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.76□□□□□ -1.17
NPM1-209ENST00000521710 HNRNPUL2Q1KMD3 747 aaKnown RBP7.76□□□□□ -1.17
NPM1-209ENST00000521710 FKBP8Q14318 412 aa7.69□□□□□ -1.18
NPM1-209ENST00000521710 ZNF219Q9P2Y4 722 aaPredicted RBP7.67□□□□□ -1.18
NPM1-209ENST00000521710 SPINK5Q9NQ38 1064 aaPredicted RBP7.65□□□□□ -1.18
NPM1-209ENST00000521710 APLP2Q06481 763 aa7.58□□□□□ -1.2
NPM1-209ENST00000521710 TRHP20396 242 aaPredicted RBP7.57□□□□□ -1.2
NPM1-209ENST00000521710 MKRN4PQ13434 485 aaPredicted RBP7.56□□□□□ -1.2
NPM1-209ENST00000521710 CAPN15O75808 1086 aa7.54□□□□□ -1.2
NPM1-209ENST00000521710 POLA2Q14181 598 aa7.52□□□□□ -1.21
NPM1-209ENST00000521710 DSG3P32926 999 aa7.48□□□□□ -1.21
NPM1-209ENST00000521710 ABCB7O75027 752 aa7.47□□□□□ -1.21
NPM1-209ENST00000521710 RTN4Q9NQC3 1192 aaKnown RBP7.46□□□□□ -1.22
NPM1-209ENST00000521710 SPDYE4A6NLX3 237 aa7.43□□□□□ -1.22
NPM1-209ENST00000521710 FBLN2P98095 1184 aa7.4□□□□□ -1.22
NPM1-209ENST00000521710 PROM2Q8N271 834 aa7.37□□□□□ -1.23
NPM1-209ENST00000521710 AMER1Q5JTC6 1135 aaPredicted RBP7.36□□□□□ -1.23
NPM1-209ENST00000521710 ZBTB12Q9Y330 459 aaPredicted RBP7.3□□□□□ -1.24
NPM1-209ENST00000521710 OSCARQ8IYS5 282 aa7.28□□□□□ -1.24
NPM1-209ENST00000521710 FBXO3Q9UK99 471 aa7.25□□□□□ -1.25
NPM1-209ENST00000521710 VASPP50552 380 aaPredicted RBP7.23□□□□□ -1.25
NPM1-209ENST00000521710 ZNF692Q9BU19 519 aaPredicted RBP7.2□□□□□ -1.26
NPM1-209ENST00000521710 IFNLR1Q8IU57 520 aaPredicted RBP7.19□□□□□ -1.26
NPM1-209ENST00000521710 SSUH2Q9Y2M2 353 aa7.19□□□□□ -1.26
NPM1-209ENST00000521710 SPDYE2BA6NHP3 402 aa7.17□□□□□ -1.26
NPM1-209ENST00000521710 SPDYE6P0CI01 402 aa7.17□□□□□ -1.26
NPM1-209ENST00000521710 SPDYE2Q495Y8 402 aa7.17□□□□□ -1.26
NPM1-209ENST00000521710 PABPN1Q86U42 306 aaKnown RBP eCLIP7.14□□□□□ -1.27
NPM1-209ENST00000521710 RBM42Q9BTD8 480 aaKnown RBP7.1□□□□□ -1.27
NPM1-209ENST00000521710 SLC24A1O60721 1099 aa7.06□□□□□ -1.28
NPM1-209ENST00000521710 PKD2Q13563 968 aa7.05□□□□□ -1.28
NPM1-209ENST00000521710 STAG3Q9UJ98 1225 aa7.03□□□□□ -1.28
NPM1-209ENST00000521710 MIER1Q8N108 512 aa7□□□□□ -1.29
NPM1-209ENST00000521710 KLHL34Q8N239 644 aa7□□□□□ -1.29
NPM1-209ENST00000521710 PLCD3Q8N3E9 789 aa7□□□□□ -1.29
NPM1-209ENST00000521710 AKT1S1Q96B36 256 aa7□□□□□ -1.29
NPM1-209ENST00000521710 SPOCK2Q92563 424 aa6.99□□□□□ -1.29
NPM1-209ENST00000521710 REM2Q8IYK8 340 aaPredicted RBP6.93□□□□□ -1.3
NPM1-209ENST00000521710 DCAF8L2P0C7V8 631 aa6.9□□□□□ -1.3
NPM1-209ENST00000521710 SPDYE1Q8NFV5 336 aaPredicted RBP6.9□□□□□ -1.3
NPM1-209ENST00000521710 ECM2O94769 699 aaPredicted RBP6.89□□□□□ -1.31
NPM1-209ENST00000521710 CLEC11AQ9Y240 323 aa6.89□□□□□ -1.31
NPM1-209ENST00000521710 RGL2O15211 777 aa6.88□□□□□ -1.31
NPM1-209ENST00000521710 CHRDL2Q6WN34 429 aa6.87□□□□□ -1.31
NPM1-209ENST00000521710 CREBZFQ9NS37 354 aa6.87□□□□□ -1.31
NPM1-209ENST00000521710 PITPNM1O00562 1244 aa6.86□□□□□ -1.31
NPM1-209ENST00000521710 NPM1P06748 294 aaKnown RBP eCLIP6.86□□□□□ -1.31
NPM1-209ENST00000521710 MNX1P50219 401 aaPredicted RBP6.86□□□□□ -1.31
NPM1-209ENST00000521710 NUBP1P53384 320 aa6.85□□□□□ -1.31
NPM1-209ENST00000521710 PLCB2Q00722 1185 aa6.85□□□□□ -1.31
NPM1-209ENST00000521710 CIZ1Q9ULV3 898 aaPredicted RBP6.85□□□□□ -1.31
NPM1-209ENST00000521710 PLEKHG5O94827 1062 aa6.84□□□□□ -1.31
NPM1-209ENST00000521710 PRR29P0C7W0 189 aa6.84□□□□□ -1.31
NPM1-209ENST00000521710 ZBTB47Q9UFB7 747 aaPredicted RBP6.84□□□□□ -1.31
NPM1-209ENST00000521710 POTEHQ6S545 545 aa6.83□□□□□ -1.32
NPM1-209ENST00000521710 RNF25Q96BH1 459 aaPredicted RBP6.8□□□□□ -1.32
NPM1-209ENST00000521710 FXR2P51116 673 aaKnown RBP eCLIP6.78□□□□□ -1.32
NPM1-209ENST00000521710 RASEFQ8IZ41 740 aa6.78□□□□□ -1.32
NPM1-209ENST00000521710 CHADLQ6NUI6 762 aa6.76□□□□□ -1.33
NPM1-209ENST00000521710 PIP4P2Q8N4L2 257 aa6.76□□□□□ -1.33
NPM1-209ENST00000521710 DCAF8Q5TAQ9 597 aa6.75□□□□□ -1.33
NPM1-209ENST00000521710 HAP1P54257 671 aaPredicted RBP6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms