RNA–Protein interactions for RNA: ENST00000521553.5

RUNX1T1-234, Transcript of RUNX1 translocation partner 1, humanhuman

TSL 1 (best) BASIC

Gene RUNX1T1, Length 1,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1T1-234ENST00000521553 AEBP2Q6ZN18 517 aaPredicted RBP30.27■■■□□ 2.44
RUNX1T1-234ENST00000521553 CHIC1Q5VXU3 224 aa28.44■■■□□ 2.14
RUNX1T1-234ENST00000521553 SENP3Q9H4L4 574 aaPredicted RBP26.06■■□□□ 1.76
RUNX1T1-234ENST00000521553 PHF23Q9BUL5 403 aaPredicted RBP25.57■■□□□ 1.68
RUNX1T1-234ENST00000521553 FOXD1Q16676 465 aa24.27■■□□□ 1.48
RUNX1T1-234ENST00000521553 POTEDQ86YR6 584 aa23.47■■□□□ 1.35
RUNX1T1-234ENST00000521553 MSH5O43196 834 aa23.06■■□□□ 1.28
RUNX1T1-234ENST00000521553 PIAS4Q8N2W9 510 aaPredicted RBP22.61■■□□□ 1.21
RUNX1T1-234ENST00000521553 PLPPR3Q6T4P5 718 aa22.32■■□□□ 1.16
RUNX1T1-234ENST00000521553 PPP6R1Q9UPN7 881 aa22.17■■□□□ 1.14
RUNX1T1-234ENST00000521553 ADRA2BP18089 450 aa22.11■■□□□ 1.13
RUNX1T1-234ENST00000521553 DMRT2Q9Y5R5 561 aa20.53■□□□□ 0.88
RUNX1T1-234ENST00000521553 MAPK8IP2Q13387 824 aaPredicted RBP20.47■□□□□ 0.87
RUNX1T1-234ENST00000521553 SCAF1Q9H7N4 1312 aaKnown RBP20.36■□□□□ 0.85
RUNX1T1-234ENST00000521553 CACNB1Q02641 598 aaPredicted RBP20.16■□□□□ 0.82
RUNX1T1-234ENST00000521553 DCAF8L1A6NGE4 600 aa19.8■□□□□ 0.76
RUNX1T1-234ENST00000521553 RNF39Q9H2S5 420 aa19.54■□□□□ 0.72
RUNX1T1-234ENST00000521553 HOXD11P31277 338 aaPredicted RBP19.51■□□□□ 0.71
RUNX1T1-234ENST00000521553 PPP4R3CPQ6ZMV5 832 aa19.46■□□□□ 0.71
RUNX1T1-234ENST00000521553 C1QBPQ07021 282 aaKnown RBP19.27■□□□□ 0.68
RUNX1T1-234ENST00000521553 CNKSR2Q8WXI2 1034 aa19.25■□□□□ 0.67
RUNX1T1-234ENST00000521553 RNF216Q9NWF9 866 aaPredicted RBP19.23■□□□□ 0.67
RUNX1T1-234ENST00000521553 DNAJC5BQ9UF47 199 aa18.98■□□□□ 0.63
RUNX1T1-234ENST00000521553 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.68■□□□□ 0.58
RUNX1T1-234ENST00000521553 NCBP3Q53F19 620 aaKnown RBP18.61■□□□□ 0.57
RUNX1T1-234ENST00000521553 POTEHQ6S545 545 aa18.31■□□□□ 0.52
RUNX1T1-234ENST00000521553 NPM3O75607 178 aaKnown RBP18.23■□□□□ 0.51
RUNX1T1-234ENST00000521553 CAPN15O75808 1086 aa18.13■□□□□ 0.49
RUNX1T1-234ENST00000521553 U3KPZ7 1027 aaPredicted RBP18.13■□□□□ 0.49
RUNX1T1-234ENST00000521553 DSG3P32926 999 aa18.09■□□□□ 0.49
RUNX1T1-234ENST00000521553 SPINK5Q9NQ38 1064 aaPredicted RBP18.04■□□□□ 0.48
RUNX1T1-234ENST00000521553 APLP2Q06481 763 aa17.72■□□□□ 0.43
RUNX1T1-234ENST00000521553 TRHP20396 242 aaPredicted RBP17.68■□□□□ 0.42
RUNX1T1-234ENST00000521553 ZNF219Q9P2Y4 722 aaPredicted RBP17.65■□□□□ 0.42
RUNX1T1-234ENST00000521553 ABCB7O75027 752 aa17.62■□□□□ 0.41
RUNX1T1-234ENST00000521553 KCNA4P22459 653 aa17.54■□□□□ 0.4
RUNX1T1-234ENST00000521553 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.52■□□□□ 0.4
RUNX1T1-234ENST00000521553 SLC4A2P04920 1241 aa17.52■□□□□ 0.4
RUNX1T1-234ENST00000521553 HNRNPUL2Q1KMD3 747 aaKnown RBP17.52■□□□□ 0.4
RUNX1T1-234ENST00000521553 RBM42Q9BTD8 480 aaKnown RBP17.4■□□□□ 0.38
RUNX1T1-234ENST00000521553 SAMD1Q6SPF0 538 aaPredicted RBP17.37■□□□□ 0.37
RUNX1T1-234ENST00000521553 CHRDL2Q6WN34 429 aa17.2■□□□□ 0.34
RUNX1T1-234ENST00000521553 POLA2Q14181 598 aa17.02■□□□□ 0.32
RUNX1T1-234ENST00000521553 MYCNP04198 464 aaPredicted RBP16.95■□□□□ 0.3
RUNX1T1-234ENST00000521553 SP7Q8TDD2 431 aaPredicted RBP16.88■□□□□ 0.29
RUNX1T1-234ENST00000521553 AKT1S1Q96B36 256 aa16.81■□□□□ 0.28
RUNX1T1-234ENST00000521553 ZBTB12Q9Y330 459 aaPredicted RBP16.73■□□□□ 0.27
RUNX1T1-234ENST00000521553 PIP4P2Q8N4L2 257 aa16.63■□□□□ 0.25
RUNX1T1-234ENST00000521553 REM2Q8IYK8 340 aaPredicted RBP16.62■□□□□ 0.25
RUNX1T1-234ENST00000521553 SLC4A1APQ9BWU0 796 aaKnown RBP16.56■□□□□ 0.24
RUNX1T1-234ENST00000521553 HAX1O00165 279 aa16.54■□□□□ 0.24
RUNX1T1-234ENST00000521553 OSCARQ8IYS5 282 aa16.52■□□□□ 0.24
RUNX1T1-234ENST00000521553 ATF5Q9Y2D1 282 aaPredicted RBP16.48■□□□□ 0.23
RUNX1T1-234ENST00000521553 PITPNM1O00562 1244 aa16.45■□□□□ 0.22
RUNX1T1-234ENST00000521553 FOXD4L1Q9NU39 408 aa16.43■□□□□ 0.22
RUNX1T1-234ENST00000521553 FXR2P51116 673 aaKnown RBP eCLIP16.42■□□□□ 0.22
RUNX1T1-234ENST00000521553 EVX2Q03828 476 aa16.16■□□□□ 0.18
RUNX1T1-234ENST00000521553 SPDYE2BA6NHP3 402 aa16.11■□□□□ 0.17
RUNX1T1-234ENST00000521553 SPDYE6P0CI01 402 aa16.11■□□□□ 0.17
RUNX1T1-234ENST00000521553 SPDYE2Q495Y8 402 aa16.11■□□□□ 0.17
RUNX1T1-234ENST00000521553 ZBTB22O15209 634 aa16.09■□□□□ 0.17
RUNX1T1-234ENST00000521553 FBLN2P98095 1184 aa16.06■□□□□ 0.16
RUNX1T1-234ENST00000521553 PRKAR2AP13861 404 aaKnown RBP16.05■□□□□ 0.16
RUNX1T1-234ENST00000521553 SPDYE1Q8NFV5 336 aaPredicted RBP16■□□□□ 0.15
RUNX1T1-234ENST00000521553 CLEC11AQ9Y240 323 aa16■□□□□ 0.15
RUNX1T1-234ENST00000521553 ATXN8OSP0DMR3 200 aa15.97■□□□□ 0.15
RUNX1T1-234ENST00000521553 C19orf67A6NJJ6 358 aa15.92■□□□□ 0.14
RUNX1T1-234ENST00000521553 GABBR2O75899 941 aa15.84■□□□□ 0.13
RUNX1T1-234ENST00000521553 LHX8Q68G74 356 aa15.83■□□□□ 0.12
RUNX1T1-234ENST00000521553 ZNF692Q9BU19 519 aaPredicted RBP15.81■□□□□ 0.12
RUNX1T1-234ENST00000521553 SSUH2Q9Y2M2 353 aa15.77■□□□□ 0.12
RUNX1T1-234ENST00000521553 MKRN4PQ13434 485 aaPredicted RBP15.7■□□□□ 0.1
RUNX1T1-234ENST00000521553 CHADLQ6NUI6 762 aa15.69■□□□□ 0.1
RUNX1T1-234ENST00000521553 PRR29P0C7W0 189 aa15.65■□□□□ 0.1
RUNX1T1-234ENST00000521553 PABPN1Q86U42 306 aaKnown RBP eCLIP15.55■□□□□ 0.08
RUNX1T1-234ENST00000521553 CD44P16070 742 aaKnown RBP15.51■□□□□ 0.07
RUNX1T1-234ENST00000521553 CLCN6P51797 869 aa15.46■□□□□ 0.07
RUNX1T1-234ENST00000521553 POTEIP0CG38 1075 aa15.43■□□□□ 0.06
RUNX1T1-234ENST00000521553 FARP1Q9Y4F1 1045 aaPredicted RBP15.43■□□□□ 0.06
RUNX1T1-234ENST00000521553 NISCHQ9Y2I1 1504 aa15.4■□□□□ 0.06
RUNX1T1-234ENST00000521553 PLSCR2Q9NRY7 297 aa15.38■□□□□ 0.05
RUNX1T1-234ENST00000521553 DCBLD2Q96PD2 775 aa15.37■□□□□ 0.05
RUNX1T1-234ENST00000521553 CSRNP3Q8WYN3 585 aa15.33■□□□□ 0.04
RUNX1T1-234ENST00000521553 ZNF579Q8NAF0 562 aaKnown RBP15.22■□□□□ 0.03
RUNX1T1-234ENST00000521553 ZRANB1Q9UGI0 708 aa15.2■□□□□ 0.02
RUNX1T1-234ENST00000521553 EHMT2Q96KQ7 1210 aa15.09■□□□□ 0.01
RUNX1T1-234ENST00000521553 GALR2O43603 387 aaPredicted RBP15.06■□□□□ 0
RUNX1T1-234ENST00000521553 STAG3Q9UJ98 1225 aa15.05■□□□□ -0
RUNX1T1-234ENST00000521553 CREBZFQ9NS37 354 aa15.04■□□□□ -0
RUNX1T1-234ENST00000521553 PAK3O75914 559 aaPredicted RBP15.03■□□□□ -0
RUNX1T1-234ENST00000521553 OTUD5Q96G74 571 aa15.02■□□□□ -0
RUNX1T1-234ENST00000521553 POTEMA6NI47 508 aa14.94□□□□□ -0.02
RUNX1T1-234ENST00000521553 POTEB2H3BUK9 544 aa14.91□□□□□ -0.02
RUNX1T1-234ENST00000521553 PHF12Q96QT6 1004 aa14.91□□□□□ -0.02
RUNX1T1-234ENST00000521553 POTEGQ6S5H5 508 aa14.88□□□□□ -0.03
RUNX1T1-234ENST00000521553 NPM1P06748 294 aaKnown RBP eCLIP14.85□□□□□ -0.03
RUNX1T1-234ENST00000521553 PELP1Q8IZL8 1130 aaKnown RBP14.77□□□□□ -0.04
RUNX1T1-234ENST00000521553 PCDH10Q9P2E7 1040 aa14.77□□□□□ -0.04
RUNX1T1-234ENST00000521553 METRNQ9UJH8 293 aa14.76□□□□□ -0.05
RUNX1T1-234ENST00000521553 SPDYE4A6NLX3 237 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms