RNA–Protein interactions for RNA: ENST00000521094.2

LRRTM2-203, Transcript of leucine rich repeat transmembrane neuronal 2, humanhuman

TSL 1 (best) BASIC

Gene LRRTM2, Length 1,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM2-203ENST00000521094 AEBP2Q6ZN18 517 aaPredicted RBP28.82■■■□□ 2.2
LRRTM2-203ENST00000521094 CHIC1Q5VXU3 224 aa27.56■■■□□ 2
LRRTM2-203ENST00000521094 SENP3Q9H4L4 574 aaPredicted RBP24.73■■□□□ 1.55
LRRTM2-203ENST00000521094 PHF23Q9BUL5 403 aaPredicted RBP24.32■■□□□ 1.48
LRRTM2-203ENST00000521094 FOXD1Q16676 465 aa22.92■■□□□ 1.26
LRRTM2-203ENST00000521094 PLPPR3Q6T4P5 718 aa22.1■■□□□ 1.13
LRRTM2-203ENST00000521094 MSH5O43196 834 aa21.56■■□□□ 1.04
LRRTM2-203ENST00000521094 PIAS4Q8N2W9 510 aaPredicted RBP21.47■■□□□ 1.03
LRRTM2-203ENST00000521094 PPP6R1Q9UPN7 881 aa21.43■■□□□ 1.02
LRRTM2-203ENST00000521094 ADRA2BP18089 450 aa21.37■■□□□ 1.01
LRRTM2-203ENST00000521094 POTEDQ86YR6 584 aa20.84■□□□□ 0.93
LRRTM2-203ENST00000521094 SCAF1Q9H7N4 1312 aaKnown RBP19.75■□□□□ 0.75
LRRTM2-203ENST00000521094 DMRT2Q9Y5R5 561 aa19.6■□□□□ 0.73
LRRTM2-203ENST00000521094 MAPK8IP2Q13387 824 aaPredicted RBP19.56■□□□□ 0.72
LRRTM2-203ENST00000521094 PPP4R3CPQ6ZMV5 832 aa19.32■□□□□ 0.68
LRRTM2-203ENST00000521094 CNKSR2Q8WXI2 1034 aa19■□□□□ 0.63
LRRTM2-203ENST00000521094 HOXD11P31277 338 aaPredicted RBP18.93■□□□□ 0.62
LRRTM2-203ENST00000521094 RNF216Q9NWF9 866 aaPredicted RBP18.82■□□□□ 0.6
LRRTM2-203ENST00000521094 NCBP3Q53F19 620 aaKnown RBP18.7■□□□□ 0.58
LRRTM2-203ENST00000521094 DCAF8L1A6NGE4 600 aa18.67■□□□□ 0.58
LRRTM2-203ENST00000521094 DNAJC5BQ9UF47 199 aa18.41■□□□□ 0.54
LRRTM2-203ENST00000521094 CACNB1Q02641 598 aaPredicted RBP18.35■□□□□ 0.53
LRRTM2-203ENST00000521094 RNF39Q9H2S5 420 aa18.34■□□□□ 0.53
LRRTM2-203ENST00000521094 NPM3O75607 178 aaKnown RBP18.32■□□□□ 0.52
LRRTM2-203ENST00000521094 C1QBPQ07021 282 aaKnown RBP18.14■□□□□ 0.49
LRRTM2-203ENST00000521094 KCNA4P22459 653 aa17.99■□□□□ 0.47
LRRTM2-203ENST00000521094 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.97■□□□□ 0.47
LRRTM2-203ENST00000521094 U3KPZ7 1027 aaPredicted RBP17.59■□□□□ 0.41
LRRTM2-203ENST00000521094 SLC4A2P04920 1241 aa17.45■□□□□ 0.38
LRRTM2-203ENST00000521094 APLP2Q06481 763 aa17.3■□□□□ 0.36
LRRTM2-203ENST00000521094 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.28■□□□□ 0.36
LRRTM2-203ENST00000521094 HNRNPUL2Q1KMD3 747 aaKnown RBP17.28■□□□□ 0.36
LRRTM2-203ENST00000521094 CAPN15O75808 1086 aa17.26■□□□□ 0.35
LRRTM2-203ENST00000521094 SPINK5Q9NQ38 1064 aaPredicted RBP17.25■□□□□ 0.35
LRRTM2-203ENST00000521094 DSG3P32926 999 aa17.18■□□□□ 0.34
LRRTM2-203ENST00000521094 SAMD1Q6SPF0 538 aaPredicted RBP17.14■□□□□ 0.33
LRRTM2-203ENST00000521094 ZNF219Q9P2Y4 722 aaPredicted RBP17.1■□□□□ 0.33
LRRTM2-203ENST00000521094 SLC4A1APQ9BWU0 796 aaKnown RBP17.05■□□□□ 0.32
LRRTM2-203ENST00000521094 MYCNP04198 464 aaPredicted RBP17.02■□□□□ 0.32
LRRTM2-203ENST00000521094 TRHP20396 242 aaPredicted RBP16.98■□□□□ 0.31
LRRTM2-203ENST00000521094 FOXD4L1Q9NU39 408 aa16.86■□□□□ 0.29
LRRTM2-203ENST00000521094 ABCB7O75027 752 aa16.81■□□□□ 0.28
LRRTM2-203ENST00000521094 POLA2Q14181 598 aa16.57■□□□□ 0.24
LRRTM2-203ENST00000521094 ZBTB22O15209 634 aa16.51■□□□□ 0.23
LRRTM2-203ENST00000521094 RBM42Q9BTD8 480 aaKnown RBP16.51■□□□□ 0.23
LRRTM2-203ENST00000521094 ATF5Q9Y2D1 282 aaPredicted RBP16.46■□□□□ 0.23
LRRTM2-203ENST00000521094 ATXN8OSP0DMR3 200 aa16.42■□□□□ 0.22
LRRTM2-203ENST00000521094 ZBTB12Q9Y330 459 aaPredicted RBP16.41■□□□□ 0.22
LRRTM2-203ENST00000521094 POTEHQ6S545 545 aa16.32■□□□□ 0.2
LRRTM2-203ENST00000521094 AKT1S1Q96B36 256 aa16.11■□□□□ 0.17
LRRTM2-203ENST00000521094 OSCARQ8IYS5 282 aa16.03■□□□□ 0.16
LRRTM2-203ENST00000521094 CHRDL2Q6WN34 429 aa16.01■□□□□ 0.15
LRRTM2-203ENST00000521094 FBLN2P98095 1184 aa15.97■□□□□ 0.15
LRRTM2-203ENST00000521094 REM2Q8IYK8 340 aaPredicted RBP15.88■□□□□ 0.13
LRRTM2-203ENST00000521094 SPDYE2BA6NHP3 402 aa15.86■□□□□ 0.13
LRRTM2-203ENST00000521094 SPDYE6P0CI01 402 aa15.86■□□□□ 0.13
LRRTM2-203ENST00000521094 SPDYE2Q495Y8 402 aa15.86■□□□□ 0.13
LRRTM2-203ENST00000521094 CSRNP3Q8WYN3 585 aa15.86■□□□□ 0.13
LRRTM2-203ENST00000521094 MKRN4PQ13434 485 aaPredicted RBP15.75■□□□□ 0.11
LRRTM2-203ENST00000521094 PITPNM1O00562 1244 aa15.69■□□□□ 0.1
LRRTM2-203ENST00000521094 SSUH2Q9Y2M2 353 aa15.63■□□□□ 0.09
LRRTM2-203ENST00000521094 PIP4P2Q8N4L2 257 aa15.62■□□□□ 0.09
LRRTM2-203ENST00000521094 EHMT2Q96KQ7 1210 aa15.62■□□□□ 0.09
LRRTM2-203ENST00000521094 ZNF692Q9BU19 519 aaPredicted RBP15.6■□□□□ 0.09
LRRTM2-203ENST00000521094 FXR2P51116 673 aaKnown RBP eCLIP15.59■□□□□ 0.09
LRRTM2-203ENST00000521094 SPDYE1Q8NFV5 336 aaPredicted RBP15.55■□□□□ 0.08
LRRTM2-203ENST00000521094 CLEC11AQ9Y240 323 aa15.4■□□□□ 0.06
LRRTM2-203ENST00000521094 SP7Q8TDD2 431 aaPredicted RBP15.36■□□□□ 0.05
LRRTM2-203ENST00000521094 PABPN1Q86U42 306 aaKnown RBP eCLIP15.35■□□□□ 0.05
LRRTM2-203ENST00000521094 HAX1O00165 279 aa15.3■□□□□ 0.04
LRRTM2-203ENST00000521094 PRKAR2AP13861 404 aaKnown RBP15.29■□□□□ 0.04
LRRTM2-203ENST00000521094 PRR29P0C7W0 189 aa15.22■□□□□ 0.03
LRRTM2-203ENST00000521094 SPDYE4A6NLX3 237 aa15.1■□□□□ 0.01
LRRTM2-203ENST00000521094 STAG3Q9UJ98 1225 aa15.09■□□□□ 0.01
LRRTM2-203ENST00000521094 C19orf67A6NJJ6 358 aa15.08■□□□□ 0
LRRTM2-203ENST00000521094 CHADLQ6NUI6 762 aa15.05■□□□□ -0
LRRTM2-203ENST00000521094 EVX2Q03828 476 aa15.03■□□□□ -0
LRRTM2-203ENST00000521094 FARP1Q9Y4F1 1045 aaPredicted RBP14.94□□□□□ -0.02
LRRTM2-203ENST00000521094 CREBZFQ9NS37 354 aa14.83□□□□□ -0.04
LRRTM2-203ENST00000521094 CD44P16070 742 aaKnown RBP14.82□□□□□ -0.04
LRRTM2-203ENST00000521094 CLCN6P51797 869 aa14.82□□□□□ -0.04
LRRTM2-203ENST00000521094 PROM2Q8N271 834 aa14.82□□□□□ -0.04
LRRTM2-203ENST00000521094 GABBR2O75899 941 aa14.79□□□□□ -0.04
LRRTM2-203ENST00000521094 NPM1P06748 294 aaKnown RBP eCLIP14.66□□□□□ -0.06
LRRTM2-203ENST00000521094 ZNF579Q8NAF0 562 aaKnown RBP14.66□□□□□ -0.06
LRRTM2-203ENST00000521094 ZRANB1Q9UGI0 708 aa14.61□□□□□ -0.07
LRRTM2-203ENST00000521094 PAK3O75914 559 aaPredicted RBP14.6□□□□□ -0.07
LRRTM2-203ENST00000521094 MNX1P50219 401 aaPredicted RBP14.6□□□□□ -0.07
LRRTM2-203ENST00000521094 PLEKHG5O94827 1062 aa14.48□□□□□ -0.09
LRRTM2-203ENST00000521094 DCBLD2Q96PD2 775 aa14.44□□□□□ -0.1
LRRTM2-203ENST00000521094 POTEIP0CG38 1075 aa14.43□□□□□ -0.1
LRRTM2-203ENST00000521094 LHX8Q68G74 356 aa14.39□□□□□ -0.11
LRRTM2-203ENST00000521094 FKBP8Q14318 412 aa14.38□□□□□ -0.11
LRRTM2-203ENST00000521094 GALR2O43603 387 aaPredicted RBP14.37□□□□□ -0.11
LRRTM2-203ENST00000521094 MIER1Q8N108 512 aa14.37□□□□□ -0.11
LRRTM2-203ENST00000521094 PHF12Q96QT6 1004 aa14.36□□□□□ -0.11
LRRTM2-203ENST00000521094 ZBTB47Q9UFB7 747 aaPredicted RBP14.31□□□□□ -0.12
LRRTM2-203ENST00000521094 PLCD3Q8N3E9 789 aa14.29□□□□□ -0.12
LRRTM2-203ENST00000521094 TSPYL2Q9H2G4 693 aaPredicted RBP14.26□□□□□ -0.13
LRRTM2-203ENST00000521094 CCDC61Q9Y6R9 512 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 105.1 ms