RNA–Protein interactions for RNA: ENST00000521059.5

PTK2-228, Transcript of protein tyrosine kinase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTK2, Length 4,405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK2-228ENST00000521059 NISCHQ9Y2I1 1504 aa14.97□□□□□ -0.01
PTK2-228ENST00000521059 SHROOM4Q9ULL8 1493 aa13.12□□□□□ -0.31
PTK2-228ENST00000521059 SUPT5HO00267 1087 aaKnown RBP12.76□□□□□ -0.37
PTK2-228ENST00000521059 DCAF8L2P0C7V8 631 aa12.72□□□□□ -0.37
PTK2-228ENST00000521059 ZCCHC6Q5VYS8 1495 aaKnown RBP12.64□□□□□ -0.39
PTK2-228ENST00000521059 CCDC180Q9P1Z9 1646 aa12.51□□□□□ -0.41
PTK2-228ENST00000521059 MYO15BQ96JP2 1530 aa12.44□□□□□ -0.42
PTK2-228ENST00000521059 CHIC1Q5VXU3 224 aa12.3□□□□□ -0.44
PTK2-228ENST00000521059 LOC105371045A0A1W2PR82 267 aa12.16□□□□□ -0.46
PTK2-228ENST00000521059 SCRIBQ14160 1630 aa12.07□□□□□ -0.48
PTK2-228ENST00000521059 DCAF1Q9Y4B6 1507 aa12.05□□□□□ -0.48
PTK2-228ENST00000521059 ABCC9O60706 1549 aa12.03□□□□□ -0.48
PTK2-228ENST00000521059 EHMT2Q96KQ7 1210 aa11.96□□□□□ -0.5
PTK2-228ENST00000521059 PCGF6Q9BYE7 350 aa11.96□□□□□ -0.5
PTK2-228ENST00000521059 RSF1Q96T23 1441 aaPredicted RBP11.94□□□□□ -0.5
PTK2-228ENST00000521059 CECR2Q9BXF3 1484 aa11.93□□□□□ -0.5
PTK2-228ENST00000521059 PPARGC1BQ86YN6 1023 aaKnown RBP11.92□□□□□ -0.5
PTK2-228ENST00000521059 RB1CC1Q8TDY2 1594 aa11.88□□□□□ -0.51
PTK2-228ENST00000521059 FAM9AQ8IZU1 332 aaPredicted RBP11.86□□□□□ -0.51
PTK2-228ENST00000521059 MROH2BQ7Z745 1585 aa11.8□□□□□ -0.52
PTK2-228ENST00000521059 HRCP23327 699 aa11.76□□□□□ -0.53
PTK2-228ENST00000521059 WIZO95785 1651 aa11.75□□□□□ -0.53
PTK2-228ENST00000521059 TRIM41Q8WV44 630 aa11.69□□□□□ -0.54
PTK2-228ENST00000521059 PABPN1Q86U42 306 aaKnown RBP eCLIP11.63□□□□□ -0.55
PTK2-228ENST00000521059 NACADO15069 1562 aa11.61□□□□□ -0.55
PTK2-228ENST00000521059 UNC13AQ9UPW8 1703 aa11.56□□□□□ -0.56
PTK2-228ENST00000521059 ABCC8Q09428 1581 aa11.54□□□□□ -0.56
PTK2-228ENST00000521059 TTBK1Q5TCY1 1321 aaPredicted RBP11.5□□□□□ -0.57
PTK2-228ENST00000521059 TRIM26Q12899 539 aaPredicted RBP11.48□□□□□ -0.57
PTK2-228ENST00000521059 EIF4G1Q04637 1599 aaKnown RBP11.48□□□□□ -0.57
PTK2-228ENST00000521059 CCDC88BA6NC98 1476 aa11.47□□□□□ -0.57
PTK2-228ENST00000521059 RUSC2Q8N2Y8 1516 aa11.46□□□□□ -0.58
PTK2-228ENST00000521059 BAZ1AQ9NRL2 1556 aaPredicted RBP11.44□□□□□ -0.58
PTK2-228ENST00000521059 SOGA1O94964 1423 aa11.42□□□□□ -0.58
PTK2-228ENST00000521059 BICRAQ9NZM4 1560 aa11.42□□□□□ -0.58
PTK2-228ENST00000521059 SMARCA4P51532 1647 aa11.4□□□□□ -0.58
PTK2-228ENST00000521059 SMARCA2P51531 1590 aa11.38□□□□□ -0.59
PTK2-228ENST00000521059 TOP2AP11388 1531 aaKnown RBP11.32□□□□□ -0.6
PTK2-228ENST00000521059 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.32□□□□□ -0.6
PTK2-228ENST00000521059 RANGAP1P46060 587 aaPredicted RBP11.24□□□□□ -0.61
PTK2-228ENST00000521059 SYNJ1O43426 1573 aa11.2□□□□□ -0.62
PTK2-228ENST00000521059 CEP162Q5TB80 1403 aa11.18□□□□□ -0.62
PTK2-228ENST00000521059 ATAD2BQ9ULI0 1458 aa11.16□□□□□ -0.62
PTK2-228ENST00000521059 UBTFP17480 764 aaKnown RBP11.16□□□□□ -0.62
PTK2-228ENST00000521059 CSRNP3Q8WYN3 585 aa11.16□□□□□ -0.62
PTK2-228ENST00000521059 WRNQ14191 1432 aaPredicted RBP eCLIP11.12□□□□□ -0.63
PTK2-228ENST00000521059 PEG3Q9GZU2 1588 aa11.08□□□□□ -0.64
PTK2-228ENST00000521059 RAPGEF2Q9Y4G8 1499 aa11.07□□□□□ -0.64
PTK2-228ENST00000521059 CCER1Q8TC90 406 aaPredicted RBP11.06□□□□□ -0.64
PTK2-228ENST00000521059 BAZ1BQ9UIG0 1483 aaKnown RBP11.06□□□□□ -0.64
PTK2-228ENST00000521059 TNIKQ9UKE5 1360 aa11.05□□□□□ -0.64
PTK2-228ENST00000521059 HNRNPUL2Q1KMD3 747 aaKnown RBP11.02□□□□□ -0.65
PTK2-228ENST00000521059 SCAF1Q9H7N4 1312 aaKnown RBP11□□□□□ -0.65
PTK2-228ENST00000521059 DNAJC5BQ9UF47 199 aa11□□□□□ -0.65
PTK2-228ENST00000521059 GOLGA3Q08378 1498 aa10.96□□□□□ -0.65
PTK2-228ENST00000521059 KANK4Q5T7N3 995 aaPredicted RBP10.96□□□□□ -0.65
PTK2-228ENST00000521059 CLIP1P30622 1438 aa10.95□□□□□ -0.66
PTK2-228ENST00000521059 CUX1P39880 1505 aa10.94□□□□□ -0.66
PTK2-228ENST00000521059 ZEB1P37275 1124 aaPredicted RBP10.93□□□□□ -0.66
PTK2-228ENST00000521059 KIF21BO75037 1637 aa10.9□□□□□ -0.66
PTK2-228ENST00000521059 TOP2BQ02880 1626 aa10.9□□□□□ -0.67
PTK2-228ENST00000521059 NEUROD1Q13562 356 aa10.89□□□□□ -0.67
PTK2-228ENST00000521059 CEP164Q9UPV0 1460 aa10.88□□□□□ -0.67
PTK2-228ENST00000521059 ARAP1Q96P48 1450 aa10.87□□□□□ -0.67
PTK2-228ENST00000521059 EEA1Q15075 1411 aa10.87□□□□□ -0.67
PTK2-228ENST00000521059 NCAPD3P42695 1498 aa10.85□□□□□ -0.67
PTK2-228ENST00000521059 VPS8Q8N3P4 1428 aa10.84□□□□□ -0.67
PTK2-228ENST00000521059 PRXQ9BXM0 1461 aa10.83□□□□□ -0.68
PTK2-228ENST00000521059 DIEXFQ68CQ4 756 aaKnown RBP10.83□□□□□ -0.68
PTK2-228ENST00000521059 BIVM-ERCC5R4GMW8 1640 aa10.82□□□□□ -0.68
PTK2-228ENST00000521059 CFTRP13569 1480 aa10.8□□□□□ -0.68
PTK2-228ENST00000521059 P3H3Q8IVL6 736 aa10.8□□□□□ -0.68
PTK2-228ENST00000521059 NESP48681 1621 aa10.8□□□□□ -0.68
PTK2-228ENST00000521059 ITGAEP38570 1179 aa10.79□□□□□ -0.68
PTK2-228ENST00000521059 MIER1Q8N108 512 aa10.76□□□□□ -0.69
PTK2-228ENST00000521059 HMGXB3Q12766 1538 aa10.76□□□□□ -0.69
PTK2-228ENST00000521059 YTHDC1Q96MU7 727 aaKnown RBP10.76□□□□□ -0.69
PTK2-228ENST00000521059 ARHGAP35Q9NRY4 1499 aa10.76□□□□□ -0.69
PTK2-228ENST00000521059 IGF1RP08069 1367 aa10.76□□□□□ -0.69
PTK2-228ENST00000521059 RAD54L2Q9Y4B4 1467 aa10.74□□□□□ -0.69
PTK2-228ENST00000521059 CUX2O14529 1486 aa10.73□□□□□ -0.69
PTK2-228ENST00000521059 CC2D2AQ9P2K1 1620 aa10.73□□□□□ -0.69
PTK2-228ENST00000521059 FGD5Q6ZNL6 1462 aa10.7□□□□□ -0.7
PTK2-228ENST00000521059 ZNF316A6NFI3 1004 aaPredicted RBP10.7□□□□□ -0.7
PTK2-228ENST00000521059 ACIN1Q9UKV3 1341 aaKnown RBP10.7□□□□□ -0.7
PTK2-228ENST00000521059 KIF27Q86VH2 1401 aa10.69□□□□□ -0.7
PTK2-228ENST00000521059 CADPSQ9ULU8 1353 aa10.69□□□□□ -0.7
PTK2-228ENST00000521059 DHX57Q6P158 1386 aaKnown RBP10.69□□□□□ -0.7
PTK2-228ENST00000521059 GTF3C3Q9Y5Q9 886 aa10.68□□□□□ -0.7
PTK2-228ENST00000521059 ERICH3Q5RHP9 1530 aa10.66□□□□□ -0.7
PTK2-228ENST00000521059 APLP2Q06481 763 aa10.66□□□□□ -0.7
PTK2-228ENST00000521059 KCNH8Q96L42 1107 aa10.66□□□□□ -0.7
PTK2-228ENST00000521059 ATP1B4Q9UN42 357 aaPredicted RBP10.64□□□□□ -0.71
PTK2-228ENST00000521059 CARMIL1Q5VZK9 1371 aa10.63□□□□□ -0.71
PTK2-228ENST00000521059 PHLDB1Q86UU1 1377 aa10.63□□□□□ -0.71
PTK2-228ENST00000521059 HIRIP3Q9BW71 556 aaPredicted RBP10.62□□□□□ -0.71
PTK2-228ENST00000521059 FANCD2Q9BXW9 1451 aa10.62□□□□□ -0.71
PTK2-228ENST00000521059 SIN3AQ96ST3 1273 aa10.61□□□□□ -0.71
PTK2-228ENST00000521059 FHOD3Q2V2M9 1422 aa10.61□□□□□ -0.71
PTK2-228ENST00000521059 TDRD9Q8NDG6 1382 aaKnown RBP10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms