RNA–Protein interactions for RNA: ENST00000521059.5

PTK2-228, Transcript of protein tyrosine kinase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTK2, Length 4,405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK2-228ENST00000521059 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.83□□□□□ -1.324e-19■■■■■ 62.4
PTK2-228ENST00000521059 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.78□□□□□ -1.165e-18■■■□□ 15.3
PTK2-228ENST00000521059 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.09□□□□□ -1.274e-14■■■■■ 50.3
PTK2-228ENST00000521059 DDX3XO00571 662 aaKnown RBP eCLIP7.82□□□□□ -1.166e-14■■■■□ 21.8
PTK2-228ENST00000521059 NKRFO15226 690 aaKnown RBP eCLIP8.29□□□□□ -1.082e-10■■■□□ 14.6
PTK2-228ENST00000521059 RBFOX2O43251 390 aaKnown RBP eCLIP5.85□□□□□ -1.475e-10■■■■■ 36.6
PTK2-228ENST00000521059 YBX3P16989 372 aaKnown RBP eCLIP7.47□□□□□ -1.214e-9■■□□□ 11.5
PTK2-228ENST00000521059 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.55□□□□□ -1.24e-9■■■■■ 36.3
PTK2-228ENST00000521059 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.36□□□□□ -1.397e-9■■■■□ 19.8
PTK2-228ENST00000521059 QKIQ96PU8 341 aaKnown RBP eCLIP7.29□□□□□ -1.242e-8■■■■■ 35.7
PTK2-228ENST00000521059 ILF3Q12906 894 aaKnown RBP eCLIP6.46□□□□□ -1.382e-8■■■■□ 22.7
PTK2-228ENST00000521059 SLBPQ14493 270 aaKnown RBP eCLIP6.8□□□□□ -1.323e-8■■■■■ 184.8
PTK2-228ENST00000521059 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.47□□□□□ -1.213e-8■■■■■ 212.2
PTK2-228ENST00000521059 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.28□□□□□ -1.244e-8■■■■□ 23.4
PTK2-228ENST00000521059 PCBP1Q15365 356 aaKnown RBP eCLIP7.08□□□□□ -1.285e-8■■■■■ 41.6
PTK2-228ENST00000521059 NONOQ15233 471 aaKnown RBP eCLIP7.94□□□□□ -1.145e-8■■□□□ 11.4
PTK2-228ENST00000521059 HNRNPKP61978 463 aaKnown RBP eCLIP6.28□□□□□ -1.47e-8■■■■□ 21.8
PTK2-228ENST00000521059 AATFQ9NY61 560 aaKnown RBP eCLIP8.23□□□□□ -1.091e-7■■■■■ 52.1
PTK2-228ENST00000521059 TIA1P31483 386 aaKnown RBP eCLIP6.77□□□□□ -1.331e-7■■□□□ 13.3
PTK2-228ENST00000521059 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.43□□□□□ -1.061e-7■■■□□ 14.9
PTK2-228ENST00000521059 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.28□□□□□ -1.242e-7■■□□□ 13.8
PTK2-228ENST00000521059 UPF1Q92900 1129 aaKnown RBP eCLIP7.46□□□□□ -1.212e-7■■■□□ 17.4
PTK2-228ENST00000521059 PRPF4O43172 522 aaKnown RBP eCLIP7.38□□□□□ -1.232e-7■■■■■ 32.7
PTK2-228ENST00000521059 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.72□□□□□ -1.492e-7■■■■□ 23.9
PTK2-228ENST00000521059 SRSF9Q13242 221 aaKnown RBP eCLIP5.11□□□□□ -1.592e-7■■□□□ 13.7
PTK2-228ENST00000521059 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.19□□□□□ -1.12e-7■■■□□ 14.9
PTK2-228ENST00000521059 SF3B4Q15427 424 aaKnown RBP eCLIP6.7□□□□□ -1.342e-7■■■■□ 25.6
PTK2-228ENST00000521059 GTF2F1P35269 517 aaKnown RBP eCLIP8.23□□□□□ -1.093e-7■■■■■ 34.8
PTK2-228ENST00000521059 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.92□□□□□ -1.33e-7■■■■■ 34.8
PTK2-228ENST00000521059 RBM22Q9NW64 420 aaKnown RBP eCLIP7.18□□□□□ -1.263e-7■■■■■ 26.9
PTK2-228ENST00000521059 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.9□□□□□ -0.823e-7■■■■□ 25.2
PTK2-228ENST00000521059 U2AF2P26368 475 aaKnown RBP eCLIP8.28□□□□□ -1.083e-7■■■□□ 15.8
PTK2-228ENST00000521059 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.16□□□□□ -0.783e-7■■■■■ 38.3
PTK2-228ENST00000521059 HNRNPLP14866 589 aaKnown RBP eCLIP7.25□□□□□ -1.254e-7■■□□□ 12.5
PTK2-228ENST00000521059 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.08□□□□□ -1.124e-7■■□□□ 11.5
PTK2-228ENST00000521059 HNRNPCP07910 306 aaKnown RBP eCLIP6.77□□□□□ -1.334e-7■□□□□ 10.5
PTK2-228ENST00000521059 SFPQP23246 707 aaKnown RBP eCLIP8.11□□□□□ -1.115e-7■■□□□ 14.5
PTK2-228ENST00000521059 PTBP1P26599 531 aaKnown RBP eCLIP6.31□□□□□ -1.45e-7■■■■□ 25.8
PTK2-228ENST00000521059 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.87□□□□□ -1.315e-7■■■■■ 31.4
PTK2-228ENST00000521059 ZNF622Q969S3 477 aaKnown RBP eCLIP7.92□□□□□ -1.146e-7■■□□□ 12.7
PTK2-228ENST00000521059 PCBP2Q15366 365 aaKnown RBP eCLIP6.92□□□□□ -1.36e-7■■■■■ 42
PTK2-228ENST00000521059 PPIGQ13427 754 aaKnown RBP eCLIP6.82□□□□□ -1.327e-7■■□□□ 11.8
PTK2-228ENST00000521059 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.83□□□□□ -1.327e-7■■■■□ 24.7
PTK2-228ENST00000521059 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.66□□□□□ -1.348e-7■□□□□ 11.2
PTK2-228ENST00000521059 RBM15Q96T37 977 aaKnown RBP eCLIP7.51□□□□□ -1.218e-7■■■□□ 17.5
PTK2-228ENST00000521059 XRCC6P12956 609 aaKnown RBP eCLIP8.91□□□□□ -0.989e-7■■■■■ 34.5
PTK2-228ENST00000521059 MATR3P43243 847 aaKnown RBP eCLIP7.92□□□□□ -1.149e-7■■■■■ 27.3
PTK2-228ENST00000521059 KHSRPQ92945 711 aaKnown RBP eCLIP7.59□□□□□ -1.191e-6■■■■□ 24.8
PTK2-228ENST00000521059 EFTUD2Q15029 972 aaKnown RBP eCLIP7.6□□□□□ -1.191e-6■■□□□ 12.9
PTK2-228ENST00000521059 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.3□□□□□ -0.921e-6■■■□□ 19.1
PTK2-228ENST00000521059 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.68□□□□□ -1.181e-6■■□□□ 13.2
PTK2-228ENST00000521059 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.93□□□□□ -1.141e-6■■■■■ 211.5
PTK2-228ENST00000521059 TARDBPQ13148 414 aaKnown RBP eCLIP6.69□□□□□ -1.341e-6■■■■□ 21.2
PTK2-228ENST00000521059 EWSR1Q01844 656 aaKnown RBP eCLIP6.01□□□□□ -1.451e-6■■■■■ 26.8
PTK2-228ENST00000521059 HNRNPMP52272 730 aaKnown RBP eCLIP10.04□□□□□ -0.81e-6■■■■□ 24
PTK2-228ENST00000521059 SF3B1O75533 1304 aaKnown RBP eCLIP7.18□□□□□ -1.261e-6■■■■■ 80.5
PTK2-228ENST00000521059 GPKOWQ92917 476 aaPredicted RBP eCLIP8.2□□□□□ -1.11e-6■■□□□ 14.5
PTK2-228ENST00000521059 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.07□□□□□ -1.441e-6■■■■■ 36.1
PTK2-228ENST00000521059 EIF4G2P78344 907 aaKnown RBP eCLIP9.97□□□□□ -0.811e-6■■■■□ 21.9
PTK2-228ENST00000521059 AQRO60306 1485 aaKnown RBP eCLIP10.45□□□□□ -0.742e-6■■■■□ 24.7
PTK2-228ENST00000521059 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.86□□□□□ -1.312e-6■■■■■ 64.5
PTK2-228ENST00000521059 FXR2P51116 673 aaKnown RBP eCLIP7.89□□□□□ -1.152e-6■■■□□ 17.7
PTK2-228ENST00000521059 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.82□□□□□ -0.842e-6■■□□□ 11.5
PTK2-228ENST00000521059 FMR1Q06787 632 aaKnown RBP eCLIP8.28□□□□□ -1.084e-6■■□□□ 11.8
PTK2-228ENST00000521059 SF3A3Q12874 501 aaKnown RBP eCLIP7.83□□□□□ -1.164e-6■■□□□ 13
PTK2-228ENST00000521059 HLTFQ14527 1009 aaKnown RBP eCLIP7.69□□□□□ -1.188e-6■■■■□ 21.3
PTK2-228ENST00000521059 DKC1O60832 514 aaKnown RBP eCLIP7.36□□□□□ -1.231e-5■■■■□ 25.7
PTK2-228ENST00000521059 PUS1Q9Y606 427 aaKnown RBP eCLIP5.97□□□□□ -1.451e-5■■■■■ 49.7
Retrieved 68 of 68 RNA–protein pairs in 41.3 ms