RNA–Protein interactions for RNA: ENST00000520956.2

CDRT4-202, CMT1A duplicated region transcript 4, humanhuman

TSL 4

Gene CDRT4, Length 470 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT4-202ENST00000520956 AEBP2Q6ZN18 517 aaPredicted RBP13.11□□□□□ -0.31
CDRT4-202ENST00000520956 CHIC1Q5VXU3 224 aa12.81□□□□□ -0.36
CDRT4-202ENST00000520956 PHF23Q9BUL5 403 aaPredicted RBP11.26□□□□□ -0.61
CDRT4-202ENST00000520956 SENP3Q9H4L4 574 aaPredicted RBP11.16□□□□□ -0.62
CDRT4-202ENST00000520956 PLPPR3Q6T4P5 718 aa10.42□□□□□ -0.74
CDRT4-202ENST00000520956 FOXD1Q16676 465 aa10.34□□□□□ -0.75
CDRT4-202ENST00000520956 ADRA2BP18089 450 aa9.94□□□□□ -0.82
CDRT4-202ENST00000520956 PPP6R1Q9UPN7 881 aa9.94□□□□□ -0.82
CDRT4-202ENST00000520956 PIAS4Q8N2W9 510 aaPredicted RBP9.76□□□□□ -0.85
CDRT4-202ENST00000520956 MSH5O43196 834 aa9.56□□□□□ -0.88
CDRT4-202ENST00000520956 PPP4R3CPQ6ZMV5 832 aa9.17□□□□□ -0.94
CDRT4-202ENST00000520956 POTEDQ86YR6 584 aa9.14□□□□□ -0.95
CDRT4-202ENST00000520956 SCAF1Q9H7N4 1312 aaKnown RBP9.13□□□□□ -0.95
CDRT4-202ENST00000520956 MAPK8IP2Q13387 824 aaPredicted RBP9.01□□□□□ -0.97
CDRT4-202ENST00000520956 KCNA4P22459 653 aa8.95□□□□□ -0.98
CDRT4-202ENST00000520956 NCBP3Q53F19 620 aaKnown RBP8.95□□□□□ -0.98
CDRT4-202ENST00000520956 CNKSR2Q8WXI2 1034 aa8.93□□□□□ -0.98
CDRT4-202ENST00000520956 DMRT2Q9Y5R5 561 aa8.9□□□□□ -0.98
CDRT4-202ENST00000520956 NPM3O75607 178 aaKnown RBP8.79□□□□□ -1
CDRT4-202ENST00000520956 RNF216Q9NWF9 866 aaPredicted RBP8.75□□□□□ -1.01
CDRT4-202ENST00000520956 HOXD11P31277 338 aaPredicted RBP8.71□□□□□ -1.02
CDRT4-202ENST00000520956 DNAJC5BQ9UF47 199 aa8.55□□□□□ -1.04
CDRT4-202ENST00000520956 SLC4A1APQ9BWU0 796 aaKnown RBP8.53□□□□□ -1.04
CDRT4-202ENST00000520956 DCAF8L1A6NGE4 600 aa8.52□□□□□ -1.05
CDRT4-202ENST00000520956 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.32□□□□□ -1.08
CDRT4-202ENST00000520956 SLC4A2P04920 1241 aa8.3□□□□□ -1.08
CDRT4-202ENST00000520956 EHMT2Q96KQ7 1210 aa8.26□□□□□ -1.09
CDRT4-202ENST00000520956 FOXD4L1Q9NU39 408 aa8.24□□□□□ -1.09
CDRT4-202ENST00000520956 ZBTB22O15209 634 aa8.21□□□□□ -1.1
CDRT4-202ENST00000520956 RNF39Q9H2S5 420 aa8.18□□□□□ -1.1
CDRT4-202ENST00000520956 CSRNP3Q8WYN3 585 aa8.17□□□□□ -1.1
CDRT4-202ENST00000520956 U3KPZ7 1027 aaPredicted RBP8.15□□□□□ -1.1
CDRT4-202ENST00000520956 MYCNP04198 464 aaPredicted RBP8.13□□□□□ -1.11
CDRT4-202ENST00000520956 C1QBPQ07021 282 aaKnown RBP8.1□□□□□ -1.11
CDRT4-202ENST00000520956 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.09□□□□□ -1.11
CDRT4-202ENST00000520956 HNRNPUL2Q1KMD3 747 aaKnown RBP8.09□□□□□ -1.11
CDRT4-202ENST00000520956 SAMD1Q6SPF0 538 aaPredicted RBP8.05□□□□□ -1.12
CDRT4-202ENST00000520956 APLP2Q06481 763 aa8□□□□□ -1.13
CDRT4-202ENST00000520956 CACNB1Q02641 598 aaPredicted RBP7.98□□□□□ -1.13
CDRT4-202ENST00000520956 ATXN8OSP0DMR3 200 aa7.97□□□□□ -1.13
CDRT4-202ENST00000520956 SPINK5Q9NQ38 1064 aaPredicted RBP7.93□□□□□ -1.14
CDRT4-202ENST00000520956 CAPN15O75808 1086 aa7.91□□□□□ -1.14
CDRT4-202ENST00000520956 ATF5Q9Y2D1 282 aaPredicted RBP7.9□□□□□ -1.14
CDRT4-202ENST00000520956 ZNF219Q9P2Y4 722 aaPredicted RBP7.88□□□□□ -1.15
CDRT4-202ENST00000520956 TRHP20396 242 aaPredicted RBP7.87□□□□□ -1.15
CDRT4-202ENST00000520956 DSG3P32926 999 aa7.78□□□□□ -1.16
CDRT4-202ENST00000520956 ABCB7O75027 752 aa7.76□□□□□ -1.17
CDRT4-202ENST00000520956 POLA2Q14181 598 aa7.76□□□□□ -1.17
CDRT4-202ENST00000520956 ZBTB12Q9Y330 459 aaPredicted RBP7.63□□□□□ -1.19
CDRT4-202ENST00000520956 FBLN2P98095 1184 aa7.6□□□□□ -1.19
CDRT4-202ENST00000520956 MKRN4PQ13434 485 aaPredicted RBP7.55□□□□□ -1.2
CDRT4-202ENST00000520956 OSCARQ8IYS5 282 aa7.47□□□□□ -1.21
CDRT4-202ENST00000520956 RBM42Q9BTD8 480 aaKnown RBP7.43□□□□□ -1.22
CDRT4-202ENST00000520956 SPDYE2BA6NHP3 402 aa7.42□□□□□ -1.22
CDRT4-202ENST00000520956 SPDYE6P0CI01 402 aa7.42□□□□□ -1.22
CDRT4-202ENST00000520956 SPDYE2Q495Y8 402 aa7.42□□□□□ -1.22
CDRT4-202ENST00000520956 SPDYE4A6NLX3 237 aa7.4□□□□□ -1.22
CDRT4-202ENST00000520956 FKBP8Q14318 412 aa7.39□□□□□ -1.23
CDRT4-202ENST00000520956 ZNF692Q9BU19 519 aaPredicted RBP7.39□□□□□ -1.23
CDRT4-202ENST00000520956 SSUH2Q9Y2M2 353 aa7.34□□□□□ -1.23
CDRT4-202ENST00000520956 AKT1S1Q96B36 256 aa7.33□□□□□ -1.24
CDRT4-202ENST00000520956 PABPN1Q86U42 306 aaKnown RBP eCLIP7.29□□□□□ -1.24
CDRT4-202ENST00000520956 REM2Q8IYK8 340 aaPredicted RBP7.26□□□□□ -1.25
CDRT4-202ENST00000520956 PROM2Q8N271 834 aa7.26□□□□□ -1.25
CDRT4-202ENST00000520956 SPDYE1Q8NFV5 336 aaPredicted RBP7.21□□□□□ -1.26
CDRT4-202ENST00000520956 STAG3Q9UJ98 1225 aa7.18□□□□□ -1.26
CDRT4-202ENST00000520956 FBXO3Q9UK99 471 aa7.17□□□□□ -1.26
CDRT4-202ENST00000520956 CLEC11AQ9Y240 323 aa7.17□□□□□ -1.26
CDRT4-202ENST00000520956 PITPNM1O00562 1244 aa7.16□□□□□ -1.26
CDRT4-202ENST00000520956 PRR29P0C7W0 189 aa7.12□□□□□ -1.27
CDRT4-202ENST00000520956 CHRDL2Q6WN34 429 aa7.12□□□□□ -1.27
CDRT4-202ENST00000520956 VASPP50552 380 aaPredicted RBP7.04□□□□□ -1.28
CDRT4-202ENST00000520956 FXR2P51116 673 aaKnown RBP eCLIP7.04□□□□□ -1.28
CDRT4-202ENST00000520956 MIER1Q8N108 512 aa7.04□□□□□ -1.28
CDRT4-202ENST00000520956 POTEHQ6S545 545 aa7.03□□□□□ -1.28
CDRT4-202ENST00000520956 PLCD3Q8N3E9 789 aa7.03□□□□□ -1.28
CDRT4-202ENST00000520956 PLEKHG5O94827 1062 aa7.02□□□□□ -1.29
CDRT4-202ENST00000520956 PIP4P2Q8N4L2 257 aa7.02□□□□□ -1.29
CDRT4-202ENST00000520956 CREBZFQ9NS37 354 aa7□□□□□ -1.29
CDRT4-202ENST00000520956 PRKAR2AP13861 404 aaKnown RBP6.99□□□□□ -1.29
CDRT4-202ENST00000520956 CHADLQ6NUI6 762 aa6.97□□□□□ -1.29
CDRT4-202ENST00000520956 ZBTB47Q9UFB7 747 aaPredicted RBP6.96□□□□□ -1.3
CDRT4-202ENST00000520956 IFNLR1Q8IU57 520 aaPredicted RBP6.94□□□□□ -1.3
CDRT4-202ENST00000520956 KLHL34Q8N239 644 aa6.94□□□□□ -1.3
CDRT4-202ENST00000520956 FARP1Q9Y4F1 1045 aaPredicted RBP6.93□□□□□ -1.3
CDRT4-202ENST00000520956 MNX1P50219 401 aaPredicted RBP6.92□□□□□ -1.3
CDRT4-202ENST00000520956 NPM1P06748 294 aaKnown RBP eCLIP6.91□□□□□ -1.3
CDRT4-202ENST00000520956 SPOCK2Q92563 424 aa6.87□□□□□ -1.31
CDRT4-202ENST00000520956 NUBP1P53384 320 aa6.83□□□□□ -1.32
CDRT4-202ENST00000520956 HAX1O00165 279 aa6.81□□□□□ -1.32
CDRT4-202ENST00000520956 PAK3O75914 559 aaPredicted RBP6.8□□□□□ -1.32
CDRT4-202ENST00000520956 RASEFQ8IZ41 740 aa6.8□□□□□ -1.32
CDRT4-202ENST00000520956 C19orf67A6NJJ6 358 aa6.79□□□□□ -1.32
CDRT4-202ENST00000520956 CD44P16070 742 aaKnown RBP6.79□□□□□ -1.32
CDRT4-202ENST00000520956 DCAF8Q5TAQ9 597 aa6.79□□□□□ -1.32
CDRT4-202ENST00000520956 FAM212AQ96EL1 285 aa6.79□□□□□ -1.32
CDRT4-202ENST00000520956 GSE1Q14687 1217 aa6.78□□□□□ -1.32
CDRT4-202ENST00000520956 TSPYL2Q9H2G4 693 aaPredicted RBP6.78□□□□□ -1.32
CDRT4-202ENST00000520956 CIZ1Q9ULV3 898 aaPredicted RBP6.77□□□□□ -1.33
CDRT4-202ENST00000520956 ZRANB1Q9UGI0 708 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms