RNA–Protein interactions for RNA: ENST00000520677.1

MRPL13-204, Transcript of mitochondrial ribosomal protein L13, humanhuman

TSL 3

Gene MRPL13, Length 500 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL13-204ENST00000520677 AEBP2Q6ZN18 517 aaPredicted RBP27.63■■■□□ 2.01
MRPL13-204ENST00000520677 CHIC1Q5VXU3 224 aa25.68■■□□□ 1.7
MRPL13-204ENST00000520677 SENP3Q9H4L4 574 aaPredicted RBP23.57■■□□□ 1.36
MRPL13-204ENST00000520677 PHF23Q9BUL5 403 aaPredicted RBP23.19■■□□□ 1.3
MRPL13-204ENST00000520677 FOXD1Q16676 465 aa22.1■■□□□ 1.13
MRPL13-204ENST00000520677 POTEDQ86YR6 584 aa21.53■■□□□ 1.04
MRPL13-204ENST00000520677 MSH5O43196 834 aa20.86■□□□□ 0.93
MRPL13-204ENST00000520677 PIAS4Q8N2W9 510 aaPredicted RBP20.41■□□□□ 0.86
MRPL13-204ENST00000520677 PPP6R1Q9UPN7 881 aa20.19■□□□□ 0.82
MRPL13-204ENST00000520677 PLPPR3Q6T4P5 718 aa20.07■□□□□ 0.8
MRPL13-204ENST00000520677 ADRA2BP18089 450 aa20.03■□□□□ 0.8
MRPL13-204ENST00000520677 DMRT2Q9Y5R5 561 aa18.64■□□□□ 0.57
MRPL13-204ENST00000520677 MAPK8IP2Q13387 824 aaPredicted RBP18.62■□□□□ 0.57
MRPL13-204ENST00000520677 CACNB1Q02641 598 aaPredicted RBP18.26■□□□□ 0.51
MRPL13-204ENST00000520677 SCAF1Q9H7N4 1312 aaKnown RBP18.24■□□□□ 0.51
MRPL13-204ENST00000520677 RNF39Q9H2S5 420 aa17.81■□□□□ 0.44
MRPL13-204ENST00000520677 DCAF8L1A6NGE4 600 aa17.73■□□□□ 0.43
MRPL13-204ENST00000520677 HOXD11P31277 338 aaPredicted RBP17.72■□□□□ 0.43
MRPL13-204ENST00000520677 PPP4R3CPQ6ZMV5 832 aa17.57■□□□□ 0.4
MRPL13-204ENST00000520677 C1QBPQ07021 282 aaKnown RBP17.47■□□□□ 0.39
MRPL13-204ENST00000520677 RNF216Q9NWF9 866 aaPredicted RBP17.36■□□□□ 0.37
MRPL13-204ENST00000520677 CNKSR2Q8WXI2 1034 aa17.33■□□□□ 0.36
MRPL13-204ENST00000520677 DNAJC5BQ9UF47 199 aa17.26■□□□□ 0.35
MRPL13-204ENST00000520677 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.75■□□□□ 0.27
MRPL13-204ENST00000520677 NCBP3Q53F19 620 aaKnown RBP16.71■□□□□ 0.27
MRPL13-204ENST00000520677 POTEHQ6S545 545 aa16.71■□□□□ 0.27
MRPL13-204ENST00000520677 NPM3O75607 178 aaKnown RBP16.59■□□□□ 0.25
MRPL13-204ENST00000520677 DSG3P32926 999 aa16.46■□□□□ 0.23
MRPL13-204ENST00000520677 U3KPZ7 1027 aaPredicted RBP16.44■□□□□ 0.22
MRPL13-204ENST00000520677 SPINK5Q9NQ38 1064 aaPredicted RBP16.37■□□□□ 0.21
MRPL13-204ENST00000520677 CAPN15O75808 1086 aa16.28■□□□□ 0.2
MRPL13-204ENST00000520677 KCNA4P22459 653 aa16■□□□□ 0.15
MRPL13-204ENST00000520677 SLC4A2P04920 1241 aa15.98■□□□□ 0.15
MRPL13-204ENST00000520677 ABCB7O75027 752 aa15.87■□□□□ 0.13
MRPL13-204ENST00000520677 TRHP20396 242 aaPredicted RBP15.86■□□□□ 0.13
MRPL13-204ENST00000520677 ZNF219Q9P2Y4 722 aaPredicted RBP15.83■□□□□ 0.12
MRPL13-204ENST00000520677 APLP2Q06481 763 aa15.76■□□□□ 0.11
MRPL13-204ENST00000520677 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.63■□□□□ 0.09
MRPL13-204ENST00000520677 HNRNPUL2Q1KMD3 747 aaKnown RBP15.63■□□□□ 0.09
MRPL13-204ENST00000520677 RBM42Q9BTD8 480 aaKnown RBP15.62■□□□□ 0.09
MRPL13-204ENST00000520677 CHRDL2Q6WN34 429 aa15.58■□□□□ 0.08
MRPL13-204ENST00000520677 SAMD1Q6SPF0 538 aaPredicted RBP15.54■□□□□ 0.08
MRPL13-204ENST00000520677 SP7Q8TDD2 431 aaPredicted RBP15.36■□□□□ 0.05
MRPL13-204ENST00000520677 POLA2Q14181 598 aa15.33■□□□□ 0.04
MRPL13-204ENST00000520677 MYCNP04198 464 aaPredicted RBP15.29■□□□□ 0.04
MRPL13-204ENST00000520677 AKT1S1Q96B36 256 aa15.17■□□□□ 0.02
MRPL13-204ENST00000520677 PIP4P2Q8N4L2 257 aa15.1■□□□□ 0.01
MRPL13-204ENST00000520677 ATF5Q9Y2D1 282 aaPredicted RBP15.08■□□□□ 0
MRPL13-204ENST00000520677 REM2Q8IYK8 340 aaPredicted RBP15.05■□□□□ -0
MRPL13-204ENST00000520677 FOXD4L1Q9NU39 408 aa14.97□□□□□ -0.01
MRPL13-204ENST00000520677 SLC4A1APQ9BWU0 796 aaKnown RBP14.96□□□□□ -0.01
MRPL13-204ENST00000520677 ZBTB12Q9Y330 459 aaPredicted RBP14.94□□□□□ -0.02
MRPL13-204ENST00000520677 FXR2P51116 673 aaKnown RBP eCLIP14.93□□□□□ -0.02
MRPL13-204ENST00000520677 HAX1O00165 279 aa14.91□□□□□ -0.02
MRPL13-204ENST00000520677 PITPNM1O00562 1244 aa14.9□□□□□ -0.02
MRPL13-204ENST00000520677 OSCARQ8IYS5 282 aa14.89□□□□□ -0.03
MRPL13-204ENST00000520677 EVX2Q03828 476 aa14.82□□□□□ -0.04
MRPL13-204ENST00000520677 ZBTB22O15209 634 aa14.77□□□□□ -0.05
MRPL13-204ENST00000520677 ATXN8OSP0DMR3 200 aa14.55□□□□□ -0.08
MRPL13-204ENST00000520677 C19orf67A6NJJ6 358 aa14.47□□□□□ -0.09
MRPL13-204ENST00000520677 PRKAR2AP13861 404 aaKnown RBP14.47□□□□□ -0.09
MRPL13-204ENST00000520677 SPDYE2BA6NHP3 402 aa14.46□□□□□ -0.09
MRPL13-204ENST00000520677 SPDYE6P0CI01 402 aa14.46□□□□□ -0.09
MRPL13-204ENST00000520677 SPDYE2Q495Y8 402 aa14.46□□□□□ -0.09
MRPL13-204ENST00000520677 GABBR2O75899 941 aa14.39□□□□□ -0.11
MRPL13-204ENST00000520677 MKRN4PQ13434 485 aaPredicted RBP14.37□□□□□ -0.11
MRPL13-204ENST00000520677 LHX8Q68G74 356 aa14.37□□□□□ -0.11
MRPL13-204ENST00000520677 SPDYE1Q8NFV5 336 aaPredicted RBP14.34□□□□□ -0.11
MRPL13-204ENST00000520677 FBLN2P98095 1184 aa14.33□□□□□ -0.12
MRPL13-204ENST00000520677 CLEC11AQ9Y240 323 aa14.3□□□□□ -0.12
MRPL13-204ENST00000520677 SSUH2Q9Y2M2 353 aa14.26□□□□□ -0.13
MRPL13-204ENST00000520677 CHADLQ6NUI6 762 aa14.17□□□□□ -0.14
MRPL13-204ENST00000520677 ZNF692Q9BU19 519 aaPredicted RBP14.16□□□□□ -0.14
MRPL13-204ENST00000520677 POTEIP0CG38 1075 aa14.15□□□□□ -0.14
MRPL13-204ENST00000520677 PRR29P0C7W0 189 aa13.99□□□□□ -0.17
MRPL13-204ENST00000520677 PABPN1Q86U42 306 aaKnown RBP eCLIP13.97□□□□□ -0.17
MRPL13-204ENST00000520677 CD44P16070 742 aaKnown RBP13.96□□□□□ -0.17
MRPL13-204ENST00000520677 PLSCR2Q9NRY7 297 aa13.91□□□□□ -0.18
MRPL13-204ENST00000520677 FARP1Q9Y4F1 1045 aaPredicted RBP13.91□□□□□ -0.18
MRPL13-204ENST00000520677 CLCN6P51797 869 aa13.9□□□□□ -0.18
MRPL13-204ENST00000520677 ZNF579Q8NAF0 562 aaKnown RBP13.77□□□□□ -0.21
MRPL13-204ENST00000520677 DCBLD2Q96PD2 775 aa13.77□□□□□ -0.21
MRPL13-204ENST00000520677 CSRNP3Q8WYN3 585 aa13.75□□□□□ -0.21
MRPL13-204ENST00000520677 OTUD5Q96G74 571 aa13.71□□□□□ -0.21
MRPL13-204ENST00000520677 POTEB2H3BUK9 544 aa13.66□□□□□ -0.22
MRPL13-204ENST00000520677 ZRANB1Q9UGI0 708 aa13.64□□□□□ -0.23
MRPL13-204ENST00000520677 GALR2O43603 387 aaPredicted RBP13.63□□□□□ -0.23
MRPL13-204ENST00000520677 CREBZFQ9NS37 354 aa13.6□□□□□ -0.23
MRPL13-204ENST00000520677 POTEMA6NI47 508 aa13.56□□□□□ -0.24
MRPL13-204ENST00000520677 POTEGQ6S5H5 508 aa13.51□□□□□ -0.25
MRPL13-204ENST00000520677 PELP1Q8IZL8 1130 aaKnown RBP13.47□□□□□ -0.25
MRPL13-204ENST00000520677 STAG3Q9UJ98 1225 aa13.46□□□□□ -0.25
MRPL13-204ENST00000520677 PHF12Q96QT6 1004 aa13.44□□□□□ -0.26
MRPL13-204ENST00000520677 SPDYE4A6NLX3 237 aa13.41□□□□□ -0.26
MRPL13-204ENST00000520677 POTEJP0CG39 1038 aa13.38□□□□□ -0.27
MRPL13-204ENST00000520677 PCDH10Q9P2E7 1040 aa13.38□□□□□ -0.27
MRPL13-204ENST00000520677 MNX1P50219 401 aaPredicted RBP13.37□□□□□ -0.27
MRPL13-204ENST00000520677 LCE2DQ5TA82 110 aaPredicted RBP13.33□□□□□ -0.28
MRPL13-204ENST00000520677 PAK3O75914 559 aaPredicted RBP13.32□□□□□ -0.28
MRPL13-204ENST00000520677 ASTLQ6HA08 431 aaPredicted RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms