RNA–Protein interactions for RNA: ENST00000520551.1

CLSPN-206, Transcript of claspin, humanhuman

TSL 1 (best) BASIC

Gene CLSPN, Length 4,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSPN-206ENST00000520551 NISCHQ9Y2I1 1504 aa12□□□□□ -0.49
CLSPN-206ENST00000520551 CCDC180Q9P1Z9 1646 aa10.62□□□□□ -0.71
CLSPN-206ENST00000520551 ZCCHC6Q5VYS8 1495 aaKnown RBP10.14□□□□□ -0.79
CLSPN-206ENST00000520551 DCAF1Q9Y4B6 1507 aa10.07□□□□□ -0.8
CLSPN-206ENST00000520551 MYO15BQ96JP2 1530 aa9.96□□□□□ -0.81
CLSPN-206ENST00000520551 NACADO15069 1562 aa9.77□□□□□ -0.85
CLSPN-206ENST00000520551 ABCC9O60706 1549 aa9.67□□□□□ -0.86
CLSPN-206ENST00000520551 UNC13AQ9UPW8 1703 aa9.63□□□□□ -0.87
CLSPN-206ENST00000520551 RB1CC1Q8TDY2 1594 aa9.63□□□□□ -0.87
CLSPN-206ENST00000520551 SCRIBQ14160 1630 aa9.54□□□□□ -0.88
CLSPN-206ENST00000520551 BICRAQ9NZM4 1560 aa9.47□□□□□ -0.89
CLSPN-206ENST00000520551 SHROOM4Q9ULL8 1493 aa9.41□□□□□ -0.9
CLSPN-206ENST00000520551 DCAF8L2P0C7V8 631 aa9.31□□□□□ -0.92
CLSPN-206ENST00000520551 PEG3Q9GZU2 1588 aa9.26□□□□□ -0.93
CLSPN-206ENST00000520551 SMARCA4P51532 1647 aa9.26□□□□□ -0.93
CLSPN-206ENST00000520551 RSF1Q96T23 1441 aaPredicted RBP9.25□□□□□ -0.93
CLSPN-206ENST00000520551 CECR2Q9BXF3 1484 aa9.25□□□□□ -0.93
CLSPN-206ENST00000520551 BAZ1AQ9NRL2 1556 aaPredicted RBP9.24□□□□□ -0.93
CLSPN-206ENST00000520551 MROH2BQ7Z745 1585 aa9.24□□□□□ -0.93
CLSPN-206ENST00000520551 WIZO95785 1651 aa9.18□□□□□ -0.94
CLSPN-206ENST00000520551 EIF4G1Q04637 1599 aaKnown RBP9.16□□□□□ -0.94
CLSPN-206ENST00000520551 TOP2AP11388 1531 aaKnown RBP9.12□□□□□ -0.95
CLSPN-206ENST00000520551 SMARCA2P51531 1590 aa9.05□□□□□ -0.96
CLSPN-206ENST00000520551 HMGXB3Q12766 1538 aa9.05□□□□□ -0.96
CLSPN-206ENST00000520551 ATAD2BQ9ULI0 1458 aa9.03□□□□□ -0.96
CLSPN-206ENST00000520551 PABPN1Q86U42 306 aaKnown RBP eCLIP8.99□□□□□ -0.97
CLSPN-206ENST00000520551 NCAPD3P42695 1498 aa8.98□□□□□ -0.97
CLSPN-206ENST00000520551 SUPT5HO00267 1087 aaKnown RBP8.96□□□□□ -0.97
CLSPN-206ENST00000520551 CCDC88BA6NC98 1476 aa8.94□□□□□ -0.98
CLSPN-206ENST00000520551 PRDM2Q13029 1718 aa8.94□□□□□ -0.98
CLSPN-206ENST00000520551 CC2D2AQ9P2K1 1620 aa8.92□□□□□ -0.98
CLSPN-206ENST00000520551 BAZ1BQ9UIG0 1483 aaKnown RBP8.9□□□□□ -0.98
CLSPN-206ENST00000520551 CHIC1Q5VXU3 224 aa8.8□□□□□ -1
CLSPN-206ENST00000520551 BIVM-ERCC5R4GMW8 1640 aa8.79□□□□□ -1
CLSPN-206ENST00000520551 CFTRP13569 1480 aa8.78□□□□□ -1
CLSPN-206ENST00000520551 SYNJ1O43426 1573 aa8.74□□□□□ -1.01
CLSPN-206ENST00000520551 ABCC8Q09428 1581 aa8.73□□□□□ -1.01
CLSPN-206ENST00000520551 TOP2BQ02880 1626 aa8.73□□□□□ -1.01
CLSPN-206ENST00000520551 LAMC3Q9Y6N6 1575 aa8.7□□□□□ -1.02
CLSPN-206ENST00000520551 CUX1P39880 1505 aa8.66□□□□□ -1.02
CLSPN-206ENST00000520551 WDR97A6NE52 1622 aa8.64□□□□□ -1.03
CLSPN-206ENST00000520551 CADPSQ9ULU8 1353 aa8.64□□□□□ -1.03
CLSPN-206ENST00000520551 WRNQ14191 1432 aaPredicted RBP eCLIP8.63□□□□□ -1.03
CLSPN-206ENST00000520551 KIF21AQ7Z4S6 1674 aa8.62□□□□□ -1.03
CLSPN-206ENST00000520551 DNMBPQ6XZF7 1577 aa8.59□□□□□ -1.03
CLSPN-206ENST00000520551 KIF21BO75037 1637 aa8.57□□□□□ -1.04
CLSPN-206ENST00000520551 NESP48681 1621 aa8.57□□□□□ -1.04
CLSPN-206ENST00000520551 FANCD2Q9BXW9 1451 aa8.56□□□□□ -1.04
CLSPN-206ENST00000520551 EEA1Q15075 1411 aa8.56□□□□□ -1.04
CLSPN-206ENST00000520551 DNAJC5BQ9UF47 199 aa8.54□□□□□ -1.04
CLSPN-206ENST00000520551 URB2Q14146 1524 aaKnown RBP8.54□□□□□ -1.04
CLSPN-206ENST00000520551 THOC2Q8NI27 1593 aaKnown RBP8.53□□□□□ -1.04
CLSPN-206ENST00000520551 RUSC2Q8N2Y8 1516 aa8.53□□□□□ -1.04
CLSPN-206ENST00000520551 TOPBP1Q92547 1522 aa8.53□□□□□ -1.04
CLSPN-206ENST00000520551 TARBP1Q13395 1621 aaKnown RBP8.52□□□□□ -1.05
CLSPN-206ENST00000520551 SOGA1O94964 1423 aa8.52□□□□□ -1.05
CLSPN-206ENST00000520551 ABCA5Q8WWZ7 1642 aa8.52□□□□□ -1.05
CLSPN-206ENST00000520551 WDR62O43379 1518 aa8.51□□□□□ -1.05
CLSPN-206ENST00000520551 CEP164Q9UPV0 1460 aa8.5□□□□□ -1.05
CLSPN-206ENST00000520551 ERICH3Q5RHP9 1530 aa8.49□□□□□ -1.05
CLSPN-206ENST00000520551 TRIM41Q8WV44 630 aa8.49□□□□□ -1.05
CLSPN-206ENST00000520551 FGD5Q6ZNL6 1462 aa8.49□□□□□ -1.05
CLSPN-206ENST00000520551 ABCA10Q8WWZ4 1543 aa8.49□□□□□ -1.05
CLSPN-206ENST00000520551 PRXQ9BXM0 1461 aa8.47□□□□□ -1.05
CLSPN-206ENST00000520551 POLA1P09884 1462 aaPredicted RBP8.47□□□□□ -1.05
CLSPN-206ENST00000520551 PDS5BQ9NTI5 1447 aa8.46□□□□□ -1.06
CLSPN-206ENST00000520551 MRC2Q9UBG0 1479 aa8.44□□□□□ -1.06
CLSPN-206ENST00000520551 CUL7Q14999 1698 aa8.43□□□□□ -1.06
CLSPN-206ENST00000520551 PBRM1Q86U86 1689 aa8.43□□□□□ -1.06
CLSPN-206ENST00000520551 CUX2O14529 1486 aa8.43□□□□□ -1.06
CLSPN-206ENST00000520551 GOLGA3Q08378 1498 aa8.4□□□□□ -1.06
CLSPN-206ENST00000520551 KIF27Q86VH2 1401 aa8.38□□□□□ -1.07
CLSPN-206ENST00000520551 TNIKQ9UKE5 1360 aa8.38□□□□□ -1.07
CLSPN-206ENST00000520551 RAPGEF2Q9Y4G8 1499 aa8.38□□□□□ -1.07
CLSPN-206ENST00000520551 CTTNBP2Q8WZ74 1663 aa8.37□□□□□ -1.07
CLSPN-206ENST00000520551 RAD54L2Q9Y4B4 1467 aa8.37□□□□□ -1.07
CLSPN-206ENST00000520551 ADAMTS12P58397 1594 aa8.35□□□□□ -1.07
CLSPN-206ENST00000520551 IGF1RP08069 1367 aa8.35□□□□□ -1.07
CLSPN-206ENST00000520551 LOC105371045A0A1W2PR82 267 aa8.34□□□□□ -1.07
CLSPN-206ENST00000520551 EIF4G3O43432 1585 aaKnown RBP8.34□□□□□ -1.07
CLSPN-206ENST00000520551 CSRNP3Q8WYN3 585 aa8.34□□□□□ -1.07
CLSPN-206ENST00000520551 IFT140Q96RY7 1462 aa8.33□□□□□ -1.08
CLSPN-206ENST00000520551 CEP162Q5TB80 1403 aa8.31□□□□□ -1.08
CLSPN-206ENST00000520551 SAMD9Q5K651 1589 aa8.3□□□□□ -1.08
CLSPN-206ENST00000520551 GAPVD1Q14C86 1478 aa8.29□□□□□ -1.08
CLSPN-206ENST00000520551 ARAP1Q96P48 1450 aa8.28□□□□□ -1.08
CLSPN-206ENST00000520551 ZNF608Q9ULD9 1512 aaPredicted RBP8.27□□□□□ -1.09
CLSPN-206ENST00000520551 EFCAB5A4FU69 1503 aa8.25□□□□□ -1.09
CLSPN-206ENST00000520551 GRIN2BQ13224 1484 aa8.24□□□□□ -1.09
CLSPN-206ENST00000520551 ARHGAP35Q9NRY4 1499 aa8.24□□□□□ -1.09
CLSPN-206ENST00000520551 CARMIL1Q5VZK9 1371 aa8.24□□□□□ -1.09
CLSPN-206ENST00000520551 LRRIQ1Q96JM4 1722 aa8.23□□□□□ -1.09
CLSPN-206ENST00000520551 CFAP43Q8NDM7 1665 aa8.23□□□□□ -1.09
CLSPN-206ENST00000520551 MAGI1Q96QZ7 1491 aaPredicted RBP8.23□□□□□ -1.09
CLSPN-206ENST00000520551 FHAD1B1AJZ9 1412 aa8.22□□□□□ -1.09
CLSPN-206ENST00000520551 FAM9AQ8IZU1 332 aaPredicted RBP8.22□□□□□ -1.09
CLSPN-206ENST00000520551 ERCC6Q03468 1493 aa8.22□□□□□ -1.09
CLSPN-206ENST00000520551 MAP3K1Q13233 1512 aa8.21□□□□□ -1.1
CLSPN-206ENST00000520551 VPS8Q8N3P4 1428 aa8.21□□□□□ -1.1
CLSPN-206ENST00000520551 UGGT2Q9NYU1 1516 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms