RNA–Protein interactions for RNA: ENST00000519885.5

TRAPPC2-208, Transcript of trafficking protein particle complex 2, humanhuman

TSL 3 BASIC

Gene TRAPPC2, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC2-208ENST00000519885 AEBP2Q6ZN18 517 aaPredicted RBP17.82■□□□□ 0.44
TRAPPC2-208ENST00000519885 CHIC1Q5VXU3 224 aa16.88■□□□□ 0.29
TRAPPC2-208ENST00000519885 SENP3Q9H4L4 574 aaPredicted RBP15.4■□□□□ 0.06
TRAPPC2-208ENST00000519885 PHF23Q9BUL5 403 aaPredicted RBP15.12■□□□□ 0.01
TRAPPC2-208ENST00000519885 FOXD1Q16676 465 aa14.27□□□□□ -0.13
TRAPPC2-208ENST00000519885 MSH5O43196 834 aa13.55□□□□□ -0.24
TRAPPC2-208ENST00000519885 PLPPR3Q6T4P5 718 aa13.48□□□□□ -0.25
TRAPPC2-208ENST00000519885 POTEDQ86YR6 584 aa13.37□□□□□ -0.27
TRAPPC2-208ENST00000519885 PIAS4Q8N2W9 510 aaPredicted RBP13.36□□□□□ -0.27
TRAPPC2-208ENST00000519885 PPP6R1Q9UPN7 881 aa13.16□□□□□ -0.3
TRAPPC2-208ENST00000519885 ADRA2BP18089 450 aa13.14□□□□□ -0.31
TRAPPC2-208ENST00000519885 SCAF1Q9H7N4 1312 aaKnown RBP12.23□□□□□ -0.45
TRAPPC2-208ENST00000519885 DMRT2Q9Y5R5 561 aa12.14□□□□□ -0.47
TRAPPC2-208ENST00000519885 MAPK8IP2Q13387 824 aaPredicted RBP12.09□□□□□ -0.47
TRAPPC2-208ENST00000519885 PPP4R3CPQ6ZMV5 832 aa11.75□□□□□ -0.53
TRAPPC2-208ENST00000519885 DCAF8L1A6NGE4 600 aa11.7□□□□□ -0.54
TRAPPC2-208ENST00000519885 CACNB1Q02641 598 aaPredicted RBP11.69□□□□□ -0.54
TRAPPC2-208ENST00000519885 KCNA4P22459 653 aa11.64□□□□□ -0.55
TRAPPC2-208ENST00000519885 HOXD11P31277 338 aaPredicted RBP11.63□□□□□ -0.55
TRAPPC2-208ENST00000519885 CNKSR2Q8WXI2 1034 aa11.61□□□□□ -0.55
TRAPPC2-208ENST00000519885 RNF216Q9NWF9 866 aaPredicted RBP11.54□□□□□ -0.56
TRAPPC2-208ENST00000519885 RNF39Q9H2S5 420 aa11.46□□□□□ -0.57
TRAPPC2-208ENST00000519885 EHMT2Q96KQ7 1210 aa11.43□□□□□ -0.58
TRAPPC2-208ENST00000519885 C1QBPQ07021 282 aaKnown RBP11.37□□□□□ -0.59
TRAPPC2-208ENST00000519885 NCBP3Q53F19 620 aaKnown RBP11.36□□□□□ -0.59
TRAPPC2-208ENST00000519885 DNAJC5BQ9UF47 199 aa11.34□□□□□ -0.59
TRAPPC2-208ENST00000519885 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.14□□□□□ -0.63
TRAPPC2-208ENST00000519885 SLC4A1APQ9BWU0 796 aaKnown RBP11.14□□□□□ -0.63
TRAPPC2-208ENST00000519885 NISCHQ9Y2I1 1504 aa11.07□□□□□ -0.64
TRAPPC2-208ENST00000519885 NPM3O75607 178 aaKnown RBP11.06□□□□□ -0.64
TRAPPC2-208ENST00000519885 CSRNP3Q8WYN3 585 aa11.02□□□□□ -0.65
TRAPPC2-208ENST00000519885 U3KPZ7 1027 aaPredicted RBP10.79□□□□□ -0.68
TRAPPC2-208ENST00000519885 CAPN15O75808 1086 aa10.75□□□□□ -0.69
TRAPPC2-208ENST00000519885 ZBTB22O15209 634 aa10.73□□□□□ -0.69
TRAPPC2-208ENST00000519885 APLP2Q06481 763 aa10.7□□□□□ -0.7
TRAPPC2-208ENST00000519885 DSG3P32926 999 aa10.67□□□□□ -0.7
TRAPPC2-208ENST00000519885 SPINK5Q9NQ38 1064 aaPredicted RBP10.67□□□□□ -0.7
TRAPPC2-208ENST00000519885 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.61□□□□□ -0.71
TRAPPC2-208ENST00000519885 HNRNPUL2Q1KMD3 747 aaKnown RBP10.61□□□□□ -0.71
TRAPPC2-208ENST00000519885 SLC4A2P04920 1241 aa10.56□□□□□ -0.72
TRAPPC2-208ENST00000519885 ZNF219Q9P2Y4 722 aaPredicted RBP10.56□□□□□ -0.72
TRAPPC2-208ENST00000519885 FOXD4L1Q9NU39 408 aa10.53□□□□□ -0.72
TRAPPC2-208ENST00000519885 TRHP20396 242 aaPredicted RBP10.52□□□□□ -0.73
TRAPPC2-208ENST00000519885 SAMD1Q6SPF0 538 aaPredicted RBP10.5□□□□□ -0.73
TRAPPC2-208ENST00000519885 POTEHQ6S545 545 aa10.49□□□□□ -0.73
TRAPPC2-208ENST00000519885 ABCB7O75027 752 aa10.42□□□□□ -0.74
TRAPPC2-208ENST00000519885 RBM42Q9BTD8 480 aaKnown RBP10.32□□□□□ -0.76
TRAPPC2-208ENST00000519885 MYCNP04198 464 aaPredicted RBP10.31□□□□□ -0.76
TRAPPC2-208ENST00000519885 POLA2Q14181 598 aa10.2□□□□□ -0.78
TRAPPC2-208ENST00000519885 AMER1Q5JTC6 1135 aaPredicted RBP10.2□□□□□ -0.78
TRAPPC2-208ENST00000519885 SLC24A1O60721 1099 aa10.17□□□□□ -0.78
TRAPPC2-208ENST00000519885 ATXN8OSP0DMR3 200 aa10.1□□□□□ -0.79
TRAPPC2-208ENST00000519885 RTN4Q9NQC3 1192 aaKnown RBP10.1□□□□□ -0.79
TRAPPC2-208ENST00000519885 ZBTB12Q9Y330 459 aaPredicted RBP10.09□□□□□ -0.79
TRAPPC2-208ENST00000519885 CHRDL2Q6WN34 429 aa10.06□□□□□ -0.8
TRAPPC2-208ENST00000519885 AKT1S1Q96B36 256 aa10□□□□□ -0.81
TRAPPC2-208ENST00000519885 FKBP8Q14318 412 aa9.95□□□□□ -0.82
TRAPPC2-208ENST00000519885 ATF5Q9Y2D1 282 aaPredicted RBP9.94□□□□□ -0.82
TRAPPC2-208ENST00000519885 REM2Q8IYK8 340 aaPredicted RBP9.85□□□□□ -0.83
TRAPPC2-208ENST00000519885 OSCARQ8IYS5 282 aa9.85□□□□□ -0.83
TRAPPC2-208ENST00000519885 CCDC180Q9P1Z9 1646 aa9.84□□□□□ -0.83
TRAPPC2-208ENST00000519885 SP7Q8TDD2 431 aaPredicted RBP9.77□□□□□ -0.85
TRAPPC2-208ENST00000519885 FBLN2P98095 1184 aa9.76□□□□□ -0.85
TRAPPC2-208ENST00000519885 PIP4P2Q8N4L2 257 aa9.75□□□□□ -0.85
TRAPPC2-208ENST00000519885 PITPNM1O00562 1244 aa9.72□□□□□ -0.85
TRAPPC2-208ENST00000519885 SPDYE2BA6NHP3 402 aa9.71□□□□□ -0.86
TRAPPC2-208ENST00000519885 SPDYE6P0CI01 402 aa9.71□□□□□ -0.86
TRAPPC2-208ENST00000519885 SPDYE2Q495Y8 402 aa9.71□□□□□ -0.86
TRAPPC2-208ENST00000519885 HAX1O00165 279 aa9.69□□□□□ -0.86
TRAPPC2-208ENST00000519885 FXR2P51116 673 aaKnown RBP eCLIP9.68□□□□□ -0.86
TRAPPC2-208ENST00000519885 SPDYE1Q8NFV5 336 aaPredicted RBP9.59□□□□□ -0.87
TRAPPC2-208ENST00000519885 ZNF692Q9BU19 519 aaPredicted RBP9.55□□□□□ -0.88
TRAPPC2-208ENST00000519885 CLEC11AQ9Y240 323 aa9.55□□□□□ -0.88
TRAPPC2-208ENST00000519885 PRKAR2AP13861 404 aaKnown RBP9.51□□□□□ -0.89
TRAPPC2-208ENST00000519885 MKRN4PQ13434 485 aaPredicted RBP9.51□□□□□ -0.89
TRAPPC2-208ENST00000519885 FBXO3Q9UK99 471 aa9.51□□□□□ -0.89
TRAPPC2-208ENST00000519885 SSUH2Q9Y2M2 353 aa9.5□□□□□ -0.89
TRAPPC2-208ENST00000519885 SPDYE4A6NLX3 237 aa9.48□□□□□ -0.89
TRAPPC2-208ENST00000519885 PRR29P0C7W0 189 aa9.4□□□□□ -0.9
TRAPPC2-208ENST00000519885 EVX2Q03828 476 aa9.4□□□□□ -0.9
TRAPPC2-208ENST00000519885 C19orf67A6NJJ6 358 aa9.38□□□□□ -0.91
TRAPPC2-208ENST00000519885 PABPN1Q86U42 306 aaKnown RBP eCLIP9.38□□□□□ -0.91
TRAPPC2-208ENST00000519885 PLCB2Q00722 1185 aa9.35□□□□□ -0.91
TRAPPC2-208ENST00000519885 PROM2Q8N271 834 aa9.35□□□□□ -0.91
TRAPPC2-208ENST00000519885 VASPP50552 380 aaPredicted RBP9.32□□□□□ -0.92
TRAPPC2-208ENST00000519885 ZCCHC6Q5VYS8 1495 aaKnown RBP9.32□□□□□ -0.92
TRAPPC2-208ENST00000519885 CHADLQ6NUI6 762 aa9.31□□□□□ -0.92
TRAPPC2-208ENST00000519885 DCAF1Q9Y4B6 1507 aa9.31□□□□□ -0.92
TRAPPC2-208ENST00000519885 MYO15BQ96JP2 1530 aa9.28□□□□□ -0.92
TRAPPC2-208ENST00000519885 GABBR2O75899 941 aa9.28□□□□□ -0.92
TRAPPC2-208ENST00000519885 CLCN6P51797 869 aa9.24□□□□□ -0.93
TRAPPC2-208ENST00000519885 IFNLR1Q8IU57 520 aaPredicted RBP9.23□□□□□ -0.93
TRAPPC2-208ENST00000519885 CD44P16070 742 aaKnown RBP9.21□□□□□ -0.94
TRAPPC2-208ENST00000519885 FARP1Q9Y4F1 1045 aaPredicted RBP9.21□□□□□ -0.94
TRAPPC2-208ENST00000519885 DCAF8L2P0C7V8 631 aa9.2□□□□□ -0.94
TRAPPC2-208ENST00000519885 HAP1P54257 671 aaPredicted RBP9.2□□□□□ -0.94
TRAPPC2-208ENST00000519885 STAG3Q9UJ98 1225 aa9.2□□□□□ -0.94
TRAPPC2-208ENST00000519885 LHX8Q68G74 356 aa9.17□□□□□ -0.94
TRAPPC2-208ENST00000519885 NACADO15069 1562 aa9.16□□□□□ -0.94
TRAPPC2-208ENST00000519885 BCANQ96GW7 911 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 178.7 ms