RNA–Protein interactions for RNA: ENST00000519538.1

IGHVII-53-1-201, Transcript of immunoglobulin heavy variable (II)-53-1 (pseudogene), humanhuman

BASIC

Gene IGHVII-53-1, Length 255 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHVII-53-1-201ENST00000519538 AEBP2Q6ZN18 517 aaPredicted RBP16.52■□□□□ 0.24
IGHVII-53-1-201ENST00000519538 CHIC1Q5VXU3 224 aa15.79■□□□□ 0.12
IGHVII-53-1-201ENST00000519538 SENP3Q9H4L4 574 aaPredicted RBP14.28□□□□□ -0.12
IGHVII-53-1-201ENST00000519538 PHF23Q9BUL5 403 aaPredicted RBP13.99□□□□□ -0.17
IGHVII-53-1-201ENST00000519538 FOXD1Q16676 465 aa13.18□□□□□ -0.3
IGHVII-53-1-201ENST00000519538 PLPPR3Q6T4P5 718 aa12.68□□□□□ -0.38
IGHVII-53-1-201ENST00000519538 MSH5O43196 834 aa12.5□□□□□ -0.41
IGHVII-53-1-201ENST00000519538 PIAS4Q8N2W9 510 aaPredicted RBP12.38□□□□□ -0.43
IGHVII-53-1-201ENST00000519538 PPP6R1Q9UPN7 881 aa12.23□□□□□ -0.45
IGHVII-53-1-201ENST00000519538 ADRA2BP18089 450 aa12.22□□□□□ -0.45
IGHVII-53-1-201ENST00000519538 POTEDQ86YR6 584 aa12.09□□□□□ -0.47
IGHVII-53-1-201ENST00000519538 SCAF1Q9H7N4 1312 aaKnown RBP11.41□□□□□ -0.58
IGHVII-53-1-201ENST00000519538 DMRT2Q9Y5R5 561 aa11.28□□□□□ -0.6
IGHVII-53-1-201ENST00000519538 MAPK8IP2Q13387 824 aaPredicted RBP11.19□□□□□ -0.62
IGHVII-53-1-201ENST00000519538 PPP4R3CPQ6ZMV5 832 aa11.03□□□□□ -0.64
IGHVII-53-1-201ENST00000519538 CNKSR2Q8WXI2 1034 aa10.9□□□□□ -0.66
IGHVII-53-1-201ENST00000519538 HOXD11P31277 338 aaPredicted RBP10.87□□□□□ -0.67
IGHVII-53-1-201ENST00000519538 RNF216Q9NWF9 866 aaPredicted RBP10.8□□□□□ -0.68
IGHVII-53-1-201ENST00000519538 DCAF8L1A6NGE4 600 aa10.78□□□□□ -0.68
IGHVII-53-1-201ENST00000519538 NCBP3Q53F19 620 aaKnown RBP10.73□□□□□ -0.69
IGHVII-53-1-201ENST00000519538 CACNB1Q02641 598 aaPredicted RBP10.66□□□□□ -0.7
IGHVII-53-1-201ENST00000519538 DNAJC5BQ9UF47 199 aa10.63□□□□□ -0.71
IGHVII-53-1-201ENST00000519538 RNF39Q9H2S5 420 aa10.59□□□□□ -0.71
IGHVII-53-1-201ENST00000519538 C1QBPQ07021 282 aaKnown RBP10.51□□□□□ -0.73
IGHVII-53-1-201ENST00000519538 NPM3O75607 178 aaKnown RBP10.42□□□□□ -0.74
IGHVII-53-1-201ENST00000519538 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.35□□□□□ -0.75
IGHVII-53-1-201ENST00000519538 KCNA4P22459 653 aa10.17□□□□□ -0.78
IGHVII-53-1-201ENST00000519538 U3KPZ7 1027 aaPredicted RBP10.07□□□□□ -0.8
IGHVII-53-1-201ENST00000519538 APLP2Q06481 763 aa10.03□□□□□ -0.8
IGHVII-53-1-201ENST00000519538 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.97□□□□□ -0.81
IGHVII-53-1-201ENST00000519538 HNRNPUL2Q1KMD3 747 aaKnown RBP9.97□□□□□ -0.81
IGHVII-53-1-201ENST00000519538 CAPN15O75808 1086 aa9.96□□□□□ -0.82
IGHVII-53-1-201ENST00000519538 SLC4A2P04920 1241 aa9.92□□□□□ -0.82
IGHVII-53-1-201ENST00000519538 DSG3P32926 999 aa9.89□□□□□ -0.83
IGHVII-53-1-201ENST00000519538 SPINK5Q9NQ38 1064 aaPredicted RBP9.89□□□□□ -0.83
IGHVII-53-1-201ENST00000519538 ZNF219Q9P2Y4 722 aaPredicted RBP9.87□□□□□ -0.83
IGHVII-53-1-201ENST00000519538 SAMD1Q6SPF0 538 aaPredicted RBP9.86□□□□□ -0.83
IGHVII-53-1-201ENST00000519538 TRHP20396 242 aaPredicted RBP9.76□□□□□ -0.85
IGHVII-53-1-201ENST00000519538 MYCNP04198 464 aaPredicted RBP9.74□□□□□ -0.85
IGHVII-53-1-201ENST00000519538 SLC4A1APQ9BWU0 796 aaKnown RBP9.67□□□□□ -0.86
IGHVII-53-1-201ENST00000519538 ABCB7O75027 752 aa9.65□□□□□ -0.86
IGHVII-53-1-201ENST00000519538 FOXD4L1Q9NU39 408 aa9.61□□□□□ -0.87
IGHVII-53-1-201ENST00000519538 RBM42Q9BTD8 480 aaKnown RBP9.58□□□□□ -0.88
IGHVII-53-1-201ENST00000519538 POTEHQ6S545 545 aa9.51□□□□□ -0.89
IGHVII-53-1-201ENST00000519538 POLA2Q14181 598 aa9.5□□□□□ -0.89
IGHVII-53-1-201ENST00000519538 ZBTB12Q9Y330 459 aaPredicted RBP9.47□□□□□ -0.89
IGHVII-53-1-201ENST00000519538 ATXN8OSP0DMR3 200 aa9.38□□□□□ -0.91
IGHVII-53-1-201ENST00000519538 ATF5Q9Y2D1 282 aaPredicted RBP9.33□□□□□ -0.92
IGHVII-53-1-201ENST00000519538 AKT1S1Q96B36 256 aa9.3□□□□□ -0.92
IGHVII-53-1-201ENST00000519538 ZBTB22O15209 634 aa9.29□□□□□ -0.92
IGHVII-53-1-201ENST00000519538 CHRDL2Q6WN34 429 aa9.27□□□□□ -0.93
IGHVII-53-1-201ENST00000519538 OSCARQ8IYS5 282 aa9.19□□□□□ -0.94
IGHVII-53-1-201ENST00000519538 FBLN2P98095 1184 aa9.18□□□□□ -0.94
IGHVII-53-1-201ENST00000519538 REM2Q8IYK8 340 aaPredicted RBP9.13□□□□□ -0.95
IGHVII-53-1-201ENST00000519538 SPDYE2BA6NHP3 402 aa9.12□□□□□ -0.95
IGHVII-53-1-201ENST00000519538 SPDYE6P0CI01 402 aa9.12□□□□□ -0.95
IGHVII-53-1-201ENST00000519538 SPDYE2Q495Y8 402 aa9.12□□□□□ -0.95
IGHVII-53-1-201ENST00000519538 PITPNM1O00562 1244 aa9.02□□□□□ -0.97
IGHVII-53-1-201ENST00000519538 PIP4P2Q8N4L2 257 aa9□□□□□ -0.97
IGHVII-53-1-201ENST00000519538 FXR2P51116 673 aaKnown RBP eCLIP8.97□□□□□ -0.97
IGHVII-53-1-201ENST00000519538 SPDYE1Q8NFV5 336 aaPredicted RBP8.96□□□□□ -0.98
IGHVII-53-1-201ENST00000519538 ZNF692Q9BU19 519 aaPredicted RBP8.95□□□□□ -0.98
IGHVII-53-1-201ENST00000519538 MKRN4PQ13434 485 aaPredicted RBP8.94□□□□□ -0.98
IGHVII-53-1-201ENST00000519538 SSUH2Q9Y2M2 353 aa8.94□□□□□ -0.98
IGHVII-53-1-201ENST00000519538 SP7Q8TDD2 431 aaPredicted RBP8.93□□□□□ -0.98
IGHVII-53-1-201ENST00000519538 CSRNP3Q8WYN3 585 aa8.89□□□□□ -0.99
IGHVII-53-1-201ENST00000519538 HAX1O00165 279 aa8.87□□□□□ -0.99
IGHVII-53-1-201ENST00000519538 CLEC11AQ9Y240 323 aa8.86□□□□□ -0.99
IGHVII-53-1-201ENST00000519538 PRKAR2AP13861 404 aaKnown RBP8.8□□□□□ -1
IGHVII-53-1-201ENST00000519538 PABPN1Q86U42 306 aaKnown RBP eCLIP8.79□□□□□ -1
IGHVII-53-1-201ENST00000519538 PRR29P0C7W0 189 aa8.76□□□□□ -1.01
IGHVII-53-1-201ENST00000519538 EHMT2Q96KQ7 1210 aa8.75□□□□□ -1.01
IGHVII-53-1-201ENST00000519538 C19orf67A6NJJ6 358 aa8.69□□□□□ -1.02
IGHVII-53-1-201ENST00000519538 STAG3Q9UJ98 1225 aa8.68□□□□□ -1.02
IGHVII-53-1-201ENST00000519538 CHADLQ6NUI6 762 aa8.63□□□□□ -1.03
IGHVII-53-1-201ENST00000519538 CLCN6P51797 869 aa8.62□□□□□ -1.03
IGHVII-53-1-201ENST00000519538 EVX2Q03828 476 aa8.62□□□□□ -1.03
IGHVII-53-1-201ENST00000519538 SPDYE4A6NLX3 237 aa8.59□□□□□ -1.03
IGHVII-53-1-201ENST00000519538 FARP1Q9Y4F1 1045 aaPredicted RBP8.58□□□□□ -1.04
IGHVII-53-1-201ENST00000519538 GABBR2O75899 941 aa8.54□□□□□ -1.04
IGHVII-53-1-201ENST00000519538 CD44P16070 742 aaKnown RBP8.54□□□□□ -1.04
IGHVII-53-1-201ENST00000519538 CREBZFQ9NS37 354 aa8.47□□□□□ -1.05
IGHVII-53-1-201ENST00000519538 NPM1P06748 294 aaKnown RBP eCLIP8.46□□□□□ -1.06
IGHVII-53-1-201ENST00000519538 PAK3O75914 559 aaPredicted RBP8.45□□□□□ -1.06
IGHVII-53-1-201ENST00000519538 ZNF579Q8NAF0 562 aaKnown RBP8.44□□□□□ -1.06
IGHVII-53-1-201ENST00000519538 ZRANB1Q9UGI0 708 aa8.4□□□□□ -1.06
IGHVII-53-1-201ENST00000519538 PROM2Q8N271 834 aa8.39□□□□□ -1.07
IGHVII-53-1-201ENST00000519538 DCBLD2Q96PD2 775 aa8.38□□□□□ -1.07
IGHVII-53-1-201ENST00000519538 LHX8Q68G74 356 aa8.36□□□□□ -1.07
IGHVII-53-1-201ENST00000519538 PLEKHG5O94827 1062 aa8.35□□□□□ -1.07
IGHVII-53-1-201ENST00000519538 MNX1P50219 401 aaPredicted RBP8.31□□□□□ -1.08
IGHVII-53-1-201ENST00000519538 POTEIP0CG38 1075 aa8.28□□□□□ -1.08
IGHVII-53-1-201ENST00000519538 GALR2O43603 387 aaPredicted RBP8.24□□□□□ -1.09
IGHVII-53-1-201ENST00000519538 ZBTB47Q9UFB7 747 aaPredicted RBP8.23□□□□□ -1.09
IGHVII-53-1-201ENST00000519538 PHF12Q96QT6 1004 aa8.22□□□□□ -1.09
IGHVII-53-1-201ENST00000519538 MIER1Q8N108 512 aa8.2□□□□□ -1.1
IGHVII-53-1-201ENST00000519538 PLCD3Q8N3E9 789 aa8.17□□□□□ -1.1
IGHVII-53-1-201ENST00000519538 TSPYL2Q9H2G4 693 aaPredicted RBP8.17□□□□□ -1.1
IGHVII-53-1-201ENST00000519538 CCDC61Q9Y6R9 512 aa8.16□□□□□ -1.1
IGHVII-53-1-201ENST00000519538 ASTLQ6HA08 431 aaPredicted RBP8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms