RNA–Protein interactions for RNA: ENST00000519163.6

CSPP1-202, Transcript of centrosome and spindle pole associated protein 1, humanhuman

TSL 2

Gene CSPP1, Length 3,982 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPP1-202ENST00000519163 AEBP2Q6ZN18 517 aaPredicted RBP11.43□□□□□ -0.58
CSPP1-202ENST00000519163 CHIC1Q5VXU3 224 aa11.35□□□□□ -0.59
CSPP1-202ENST00000519163 PHF23Q9BUL5 403 aaPredicted RBP10.35□□□□□ -0.75
CSPP1-202ENST00000519163 PLPPR3Q6T4P5 718 aa9.17□□□□□ -0.94
CSPP1-202ENST00000519163 SENP3Q9H4L4 574 aaPredicted RBP9.07□□□□□ -0.96
CSPP1-202ENST00000519163 ADRA2BP18089 450 aa8.97□□□□□ -0.97
CSPP1-202ENST00000519163 PPP6R1Q9UPN7 881 aa8.89□□□□□ -0.99
CSPP1-202ENST00000519163 KCNA4P22459 653 aa8.77□□□□□ -1.01
CSPP1-202ENST00000519163 FOXD1Q16676 465 aa8.67□□□□□ -1.02
CSPP1-202ENST00000519163 CSRNP3Q8WYN3 585 aa8.53□□□□□ -1.04
CSPP1-202ENST00000519163 EHMT2Q96KQ7 1210 aa8.42□□□□□ -1.06
CSPP1-202ENST00000519163 ZBTB22O15209 634 aa8.41□□□□□ -1.06
CSPP1-202ENST00000519163 PPP4R3CPQ6ZMV5 832 aa8.23□□□□□ -1.09
CSPP1-202ENST00000519163 DNAJC5BQ9UF47 199 aa8.21□□□□□ -1.09
CSPP1-202ENST00000519163 NPM3O75607 178 aaKnown RBP8.2□□□□□ -1.1
CSPP1-202ENST00000519163 SLC4A1APQ9BWU0 796 aaKnown RBP8.13□□□□□ -1.11
CSPP1-202ENST00000519163 NISCHQ9Y2I1 1504 aa7.96□□□□□ -1.13
CSPP1-202ENST00000519163 PIAS4Q8N2W9 510 aaPredicted RBP7.96□□□□□ -1.13
CSPP1-202ENST00000519163 CNKSR2Q8WXI2 1034 aa7.85□□□□□ -1.15
CSPP1-202ENST00000519163 MAPK8IP2Q13387 824 aaPredicted RBP7.82□□□□□ -1.16
CSPP1-202ENST00000519163 SLC4A2P04920 1241 aa7.81□□□□□ -1.16
CSPP1-202ENST00000519163 NCBP3Q53F19 620 aaKnown RBP7.79□□□□□ -1.16
CSPP1-202ENST00000519163 RTN4Q9NQC3 1192 aaKnown RBP7.77□□□□□ -1.17
CSPP1-202ENST00000519163 FOXD4L1Q9NU39 408 aa7.71□□□□□ -1.18
CSPP1-202ENST00000519163 RNF216Q9NWF9 866 aaPredicted RBP7.68□□□□□ -1.18
CSPP1-202ENST00000519163 HOXD11P31277 338 aaPredicted RBP7.67□□□□□ -1.18
CSPP1-202ENST00000519163 CCDC180Q9P1Z9 1646 aa7.66□□□□□ -1.18
CSPP1-202ENST00000519163 SLC24A1O60721 1099 aa7.59□□□□□ -1.2
CSPP1-202ENST00000519163 ATF5Q9Y2D1 282 aaPredicted RBP7.55□□□□□ -1.2
CSPP1-202ENST00000519163 DMRT2Q9Y5R5 561 aa7.54□□□□□ -1.2
CSPP1-202ENST00000519163 AMER1Q5JTC6 1135 aaPredicted RBP7.45□□□□□ -1.22
CSPP1-202ENST00000519163 ATXN8OSP0DMR3 200 aa7.44□□□□□ -1.22
CSPP1-202ENST00000519163 MSH5O43196 834 aa7.43□□□□□ -1.22
CSPP1-202ENST00000519163 ABCC9O60706 1549 aa7.41□□□□□ -1.22
CSPP1-202ENST00000519163 SCAF1Q9H7N4 1312 aaKnown RBP7.4□□□□□ -1.23
CSPP1-202ENST00000519163 PROM2Q8N271 834 aa7.36□□□□□ -1.23
CSPP1-202ENST00000519163 MYCNP04198 464 aaPredicted RBP7.31□□□□□ -1.24
CSPP1-202ENST00000519163 FKBP8Q14318 412 aa7.29□□□□□ -1.24
CSPP1-202ENST00000519163 RB1CC1Q8TDY2 1594 aa7.27□□□□□ -1.25
CSPP1-202ENST00000519163 SHROOM4Q9ULL8 1493 aa7.26□□□□□ -1.25
CSPP1-202ENST00000519163 MKRN4PQ13434 485 aaPredicted RBP7.23□□□□□ -1.25
CSPP1-202ENST00000519163 U3KPZ7 1027 aaPredicted RBP7.21□□□□□ -1.26
CSPP1-202ENST00000519163 NACADO15069 1562 aa7.19□□□□□ -1.26
CSPP1-202ENST00000519163 MYO15BQ96JP2 1530 aa7.16□□□□□ -1.26
CSPP1-202ENST00000519163 UNC13AQ9UPW8 1703 aa7.15□□□□□ -1.27
CSPP1-202ENST00000519163 DNAJC5Q9H3Z4 198 aa7.12□□□□□ -1.27
CSPP1-202ENST00000519163 PKD2Q13563 968 aa7.07□□□□□ -1.28
CSPP1-202ENST00000519163 IFNLR1Q8IU57 520 aaPredicted RBP7.06□□□□□ -1.28
CSPP1-202ENST00000519163 BICRAQ9NZM4 1560 aa7.04□□□□□ -1.28
CSPP1-202ENST00000519163 PLCB2Q00722 1185 aa7.02□□□□□ -1.29
CSPP1-202ENST00000519163 ZNF219Q9P2Y4 722 aaPredicted RBP6.98□□□□□ -1.29
CSPP1-202ENST00000519163 KDM2AQ9Y2K7 1162 aa6.98□□□□□ -1.29
CSPP1-202ENST00000519163 NPM1P06748 294 aaKnown RBP eCLIP6.97□□□□□ -1.29
CSPP1-202ENST00000519163 CUX2O14529 1486 aa6.96□□□□□ -1.29
CSPP1-202ENST00000519163 CC2D2AQ9P2K1 1620 aa6.92□□□□□ -1.3
CSPP1-202ENST00000519163 PRKCSHP14314 528 aaPredicted RBP6.91□□□□□ -1.3
CSPP1-202ENST00000519163 VASPP50552 380 aaPredicted RBP6.87□□□□□ -1.31
CSPP1-202ENST00000519163 CECR2Q9BXF3 1484 aa6.86□□□□□ -1.31
CSPP1-202ENST00000519163 FBLN2P98095 1184 aa6.85□□□□□ -1.31
CSPP1-202ENST00000519163 DCAF1Q9Y4B6 1507 aa6.85□□□□□ -1.31
CSPP1-202ENST00000519163 SAMD1Q6SPF0 538 aaPredicted RBP6.85□□□□□ -1.31
CSPP1-202ENST00000519163 SPDYE4A6NLX3 237 aa6.84□□□□□ -1.31
CSPP1-202ENST00000519163 EIF4G1Q04637 1599 aaKnown RBP6.84□□□□□ -1.31
CSPP1-202ENST00000519163 SPINK5Q9NQ38 1064 aaPredicted RBP6.8□□□□□ -1.32
CSPP1-202ENST00000519163 TAOK2Q9UL54 1235 aa6.79□□□□□ -1.32
CSPP1-202ENST00000519163 RNF39Q9H2S5 420 aa6.74□□□□□ -1.33
CSPP1-202ENST00000519163 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.74□□□□□ -1.33
CSPP1-202ENST00000519163 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.73□□□□□ -1.33
CSPP1-202ENST00000519163 HNRNPUL2Q1KMD3 747 aaKnown RBP6.73□□□□□ -1.33
CSPP1-202ENST00000519163 VSIG10Q8N0Z9 540 aa6.72□□□□□ -1.33
CSPP1-202ENST00000519163 RGL2O15211 777 aa6.71□□□□□ -1.34
CSPP1-202ENST00000519163 RNF25Q96BH1 459 aaPredicted RBP6.69□□□□□ -1.34
CSPP1-202ENST00000519163 FBXO3Q9UK99 471 aa6.68□□□□□ -1.34
CSPP1-202ENST00000519163 SSUH2Q9Y2M2 353 aa6.68□□□□□ -1.34
CSPP1-202ENST00000519163 NKX1-1Q15270 411 aaPredicted RBP6.66□□□□□ -1.34
CSPP1-202ENST00000519163 THOC2Q8NI27 1593 aaKnown RBP6.65□□□□□ -1.35
CSPP1-202ENST00000519163 BBXQ8WY36 941 aaPredicted RBP6.65□□□□□ -1.35
CSPP1-202ENST00000519163 POLA2Q14181 598 aa6.63□□□□□ -1.35
CSPP1-202ENST00000519163 TSHZ2Q9NRE2 1034 aa6.61□□□□□ -1.35
CSPP1-202ENST00000519163 PABPN1Q86U42 306 aaKnown RBP eCLIP6.61□□□□□ -1.35
CSPP1-202ENST00000519163 HAP1P54257 671 aaPredicted RBP6.6□□□□□ -1.35
CSPP1-202ENST00000519163 BCANQ96GW7 911 aa6.6□□□□□ -1.35
CSPP1-202ENST00000519163 MNX1P50219 401 aaPredicted RBP6.59□□□□□ -1.36
CSPP1-202ENST00000519163 HMGXB3Q12766 1538 aa6.58□□□□□ -1.36
CSPP1-202ENST00000519163 ZCCHC6Q5VYS8 1495 aaKnown RBP6.57□□□□□ -1.36
CSPP1-202ENST00000519163 DSG3P32926 999 aa6.56□□□□□ -1.36
CSPP1-202ENST00000519163 NCAPD3P42695 1498 aa6.55□□□□□ -1.36
CSPP1-202ENST00000519163 LAMC3Q9Y6N6 1575 aa6.54□□□□□ -1.36
CSPP1-202ENST00000519163 TIMELESSQ9UNS1 1208 aa6.53□□□□□ -1.36
CSPP1-202ENST00000519163 TPRNQ4KMQ1 711 aa6.53□□□□□ -1.36
CSPP1-202ENST00000519163 SMARCA2P51531 1590 aa6.53□□□□□ -1.36
CSPP1-202ENST00000519163 DCAF8L1A6NGE4 600 aa6.52□□□□□ -1.37
CSPP1-202ENST00000519163 SPOCK2Q92563 424 aa6.5□□□□□ -1.37
CSPP1-202ENST00000519163 HS6ST3Q8IZP7 471 aa6.5□□□□□ -1.37
CSPP1-202ENST00000519163 GTPBP6O43824 516 aaPredicted RBP6.5□□□□□ -1.37
CSPP1-202ENST00000519163 NUBP1P53384 320 aa6.5□□□□□ -1.37
CSPP1-202ENST00000519163 PEG3Q9GZU2 1588 aa6.48□□□□□ -1.37
CSPP1-202ENST00000519163 ERCC6Q03468 1493 aa6.48□□□□□ -1.37
CSPP1-202ENST00000519163 SCRIBQ14160 1630 aa6.47□□□□□ -1.37
CSPP1-202ENST00000519163 BAZ1AQ9NRL2 1556 aaPredicted RBP6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms