RNA–Protein interactions for RNA: ENST00000518959.1

ATP6V1C1-204, Transcript of ATPase H+ transporting V1 subunit C1, humanhuman

TSL 2

Gene ATP6V1C1, Length 553 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1C1-204ENST00000518959 AEBP2Q6ZN18 517 aaPredicted RBP25■■□□□ 1.59
ATP6V1C1-204ENST00000518959 CHIC1Q5VXU3 224 aa23.47■■□□□ 1.35
ATP6V1C1-204ENST00000518959 SENP3Q9H4L4 574 aaPredicted RBP21.47■■□□□ 1.03
ATP6V1C1-204ENST00000518959 PHF23Q9BUL5 403 aaPredicted RBP21.12■□□□□ 0.97
ATP6V1C1-204ENST00000518959 FOXD1Q16676 465 aa20■□□□□ 0.79
ATP6V1C1-204ENST00000518959 POTEDQ86YR6 584 aa18.99■□□□□ 0.63
ATP6V1C1-204ENST00000518959 MSH5O43196 834 aa18.9■□□□□ 0.62
ATP6V1C1-204ENST00000518959 PIAS4Q8N2W9 510 aaPredicted RBP18.68■□□□□ 0.58
ATP6V1C1-204ENST00000518959 PLPPR3Q6T4P5 718 aa18.63■□□□□ 0.57
ATP6V1C1-204ENST00000518959 PPP6R1Q9UPN7 881 aa18.43■□□□□ 0.54
ATP6V1C1-204ENST00000518959 ADRA2BP18089 450 aa18.4■□□□□ 0.54
ATP6V1C1-204ENST00000518959 MAPK8IP2Q13387 824 aaPredicted RBP16.99■□□□□ 0.31
ATP6V1C1-204ENST00000518959 DMRT2Q9Y5R5 561 aa16.93■□□□□ 0.3
ATP6V1C1-204ENST00000518959 SCAF1Q9H7N4 1312 aaKnown RBP16.89■□□□□ 0.29
ATP6V1C1-204ENST00000518959 CACNB1Q02641 598 aaPredicted RBP16.47■□□□□ 0.23
ATP6V1C1-204ENST00000518959 DCAF8L1A6NGE4 600 aa16.41■□□□□ 0.22
ATP6V1C1-204ENST00000518959 PPP4R3CPQ6ZMV5 832 aa16.28■□□□□ 0.2
ATP6V1C1-204ENST00000518959 HOXD11P31277 338 aaPredicted RBP16.14■□□□□ 0.17
ATP6V1C1-204ENST00000518959 CNKSR2Q8WXI2 1034 aa16.05■□□□□ 0.16
ATP6V1C1-204ENST00000518959 RNF39Q9H2S5 420 aa16.05■□□□□ 0.16
ATP6V1C1-204ENST00000518959 RNF216Q9NWF9 866 aaPredicted RBP15.97■□□□□ 0.15
ATP6V1C1-204ENST00000518959 C1QBPQ07021 282 aaKnown RBP15.83■□□□□ 0.12
ATP6V1C1-204ENST00000518959 DNAJC5BQ9UF47 199 aa15.63■□□□□ 0.09
ATP6V1C1-204ENST00000518959 NCBP3Q53F19 620 aaKnown RBP15.61■□□□□ 0.09
ATP6V1C1-204ENST00000518959 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.51■□□□□ 0.07
ATP6V1C1-204ENST00000518959 NPM3O75607 178 aaKnown RBP15.3■□□□□ 0.04
ATP6V1C1-204ENST00000518959 U3KPZ7 1027 aaPredicted RBP15.05■□□□□ -0
ATP6V1C1-204ENST00000518959 CAPN15O75808 1086 aa15.02■□□□□ -0
ATP6V1C1-204ENST00000518959 SPINK5Q9NQ38 1064 aaPredicted RBP14.96□□□□□ -0.01
ATP6V1C1-204ENST00000518959 DSG3P32926 999 aa14.92□□□□□ -0.02
ATP6V1C1-204ENST00000518959 POTEHQ6S545 545 aa14.84□□□□□ -0.03
ATP6V1C1-204ENST00000518959 KCNA4P22459 653 aa14.72□□□□□ -0.05
ATP6V1C1-204ENST00000518959 TRHP20396 242 aaPredicted RBP14.71□□□□□ -0.05
ATP6V1C1-204ENST00000518959 APLP2Q06481 763 aa14.7□□□□□ -0.06
ATP6V1C1-204ENST00000518959 SLC4A2P04920 1241 aa14.67□□□□□ -0.06
ATP6V1C1-204ENST00000518959 ABCB7O75027 752 aa14.63□□□□□ -0.07
ATP6V1C1-204ENST00000518959 ZNF219Q9P2Y4 722 aaPredicted RBP14.62□□□□□ -0.07
ATP6V1C1-204ENST00000518959 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.58□□□□□ -0.08
ATP6V1C1-204ENST00000518959 HNRNPUL2Q1KMD3 747 aaKnown RBP14.58□□□□□ -0.08
ATP6V1C1-204ENST00000518959 SAMD1Q6SPF0 538 aaPredicted RBP14.47□□□□□ -0.09
ATP6V1C1-204ENST00000518959 RBM42Q9BTD8 480 aaKnown RBP14.31□□□□□ -0.12
ATP6V1C1-204ENST00000518959 MYCNP04198 464 aaPredicted RBP14.2□□□□□ -0.14
ATP6V1C1-204ENST00000518959 POLA2Q14181 598 aa14.19□□□□□ -0.14
ATP6V1C1-204ENST00000518959 CHRDL2Q6WN34 429 aa14.11□□□□□ -0.15
ATP6V1C1-204ENST00000518959 ZBTB12Q9Y330 459 aaPredicted RBP13.9□□□□□ -0.18
ATP6V1C1-204ENST00000518959 AKT1S1Q96B36 256 aa13.88□□□□□ -0.19
ATP6V1C1-204ENST00000518959 SLC4A1APQ9BWU0 796 aaKnown RBP13.88□□□□□ -0.19
ATP6V1C1-204ENST00000518959 FOXD4L1Q9NU39 408 aa13.86□□□□□ -0.19
ATP6V1C1-204ENST00000518959 ATF5Q9Y2D1 282 aaPredicted RBP13.85□□□□□ -0.19
ATP6V1C1-204ENST00000518959 REM2Q8IYK8 340 aaPredicted RBP13.75□□□□□ -0.21
ATP6V1C1-204ENST00000518959 OSCARQ8IYS5 282 aa13.75□□□□□ -0.21
ATP6V1C1-204ENST00000518959 SP7Q8TDD2 431 aaPredicted RBP13.75□□□□□ -0.21
ATP6V1C1-204ENST00000518959 PIP4P2Q8N4L2 257 aa13.69□□□□□ -0.22
ATP6V1C1-204ENST00000518959 HAX1O00165 279 aa13.61□□□□□ -0.23
ATP6V1C1-204ENST00000518959 PITPNM1O00562 1244 aa13.61□□□□□ -0.23
ATP6V1C1-204ENST00000518959 FXR2P51116 673 aaKnown RBP eCLIP13.52□□□□□ -0.25
ATP6V1C1-204ENST00000518959 ZBTB22O15209 634 aa13.48□□□□□ -0.25
ATP6V1C1-204ENST00000518959 ATXN8OSP0DMR3 200 aa13.44□□□□□ -0.26
ATP6V1C1-204ENST00000518959 FBLN2P98095 1184 aa13.44□□□□□ -0.26
ATP6V1C1-204ENST00000518959 SPDYE2BA6NHP3 402 aa13.41□□□□□ -0.26
ATP6V1C1-204ENST00000518959 SPDYE6P0CI01 402 aa13.41□□□□□ -0.26
ATP6V1C1-204ENST00000518959 SPDYE2Q495Y8 402 aa13.41□□□□□ -0.26
ATP6V1C1-204ENST00000518959 CLEC11AQ9Y240 323 aa13.33□□□□□ -0.28
ATP6V1C1-204ENST00000518959 EVX2Q03828 476 aa13.3□□□□□ -0.28
ATP6V1C1-204ENST00000518959 PRKAR2AP13861 404 aaKnown RBP13.29□□□□□ -0.28
ATP6V1C1-204ENST00000518959 SPDYE1Q8NFV5 336 aaPredicted RBP13.29□□□□□ -0.28
ATP6V1C1-204ENST00000518959 ZNF692Q9BU19 519 aaPredicted RBP13.24□□□□□ -0.29
ATP6V1C1-204ENST00000518959 MKRN4PQ13434 485 aaPredicted RBP13.18□□□□□ -0.3
ATP6V1C1-204ENST00000518959 SSUH2Q9Y2M2 353 aa13.14□□□□□ -0.31
ATP6V1C1-204ENST00000518959 C19orf67A6NJJ6 358 aa13.1□□□□□ -0.31
ATP6V1C1-204ENST00000518959 CHADLQ6NUI6 762 aa13.05□□□□□ -0.32
ATP6V1C1-204ENST00000518959 PRR29P0C7W0 189 aa13.04□□□□□ -0.32
ATP6V1C1-204ENST00000518959 GABBR2O75899 941 aa13.02□□□□□ -0.33
ATP6V1C1-204ENST00000518959 PABPN1Q86U42 306 aaKnown RBP eCLIP13.02□□□□□ -0.33
ATP6V1C1-204ENST00000518959 LHX8Q68G74 356 aa12.91□□□□□ -0.34
ATP6V1C1-204ENST00000518959 CD44P16070 742 aaKnown RBP12.85□□□□□ -0.35
ATP6V1C1-204ENST00000518959 FARP1Q9Y4F1 1045 aaPredicted RBP12.81□□□□□ -0.36
ATP6V1C1-204ENST00000518959 CLCN6P51797 869 aa12.71□□□□□ -0.37
ATP6V1C1-204ENST00000518959 POTEIP0CG38 1075 aa12.69□□□□□ -0.38
ATP6V1C1-204ENST00000518959 DCBLD2Q96PD2 775 aa12.68□□□□□ -0.38
ATP6V1C1-204ENST00000518959 ZRANB1Q9UGI0 708 aa12.63□□□□□ -0.39
ATP6V1C1-204ENST00000518959 STAG3Q9UJ98 1225 aa12.6□□□□□ -0.39
ATP6V1C1-204ENST00000518959 ZNF579Q8NAF0 562 aaKnown RBP12.58□□□□□ -0.4
ATP6V1C1-204ENST00000518959 CSRNP3Q8WYN3 585 aa12.58□□□□□ -0.4
ATP6V1C1-204ENST00000518959 CREBZFQ9NS37 354 aa12.56□□□□□ -0.4
ATP6V1C1-204ENST00000518959 PAK3O75914 559 aaPredicted RBP12.5□□□□□ -0.41
ATP6V1C1-204ENST00000518959 SPDYE4A6NLX3 237 aa12.47□□□□□ -0.41
ATP6V1C1-204ENST00000518959 GALR2O43603 387 aaPredicted RBP12.47□□□□□ -0.41
ATP6V1C1-204ENST00000518959 PLSCR2Q9NRY7 297 aa12.45□□□□□ -0.42
ATP6V1C1-204ENST00000518959 NPM1P06748 294 aaKnown RBP eCLIP12.4□□□□□ -0.42
ATP6V1C1-204ENST00000518959 PHF12Q96QT6 1004 aa12.4□□□□□ -0.42
ATP6V1C1-204ENST00000518959 EHMT2Q96KQ7 1210 aa12.34□□□□□ -0.43
ATP6V1C1-204ENST00000518959 OTUD5Q96G74 571 aa12.32□□□□□ -0.44
ATP6V1C1-204ENST00000518959 POTEB2H3BUK9 544 aa12.27□□□□□ -0.45
ATP6V1C1-204ENST00000518959 MNX1P50219 401 aaPredicted RBP12.25□□□□□ -0.45
ATP6V1C1-204ENST00000518959 PELP1Q8IZL8 1130 aaKnown RBP12.23□□□□□ -0.45
ATP6V1C1-204ENST00000518959 MS4A3Q96HJ5 214 aa12.2□□□□□ -0.46
ATP6V1C1-204ENST00000518959 METRNQ9UJH8 293 aa12.19□□□□□ -0.46
ATP6V1C1-204ENST00000518959 POTEMA6NI47 508 aa12.18□□□□□ -0.46
ATP6V1C1-204ENST00000518959 TSPYL2Q9H2G4 693 aaPredicted RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms