RNA–Protein interactions for RNA: ENST00000518944.1

CHCHD7-208, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 7, humanhuman

TSL 2

Gene CHCHD7, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD7-208ENST00000518944 AEBP2Q6ZN18 517 aaPredicted RBP22.11■■□□□ 1.13
CHCHD7-208ENST00000518944 CHIC1Q5VXU3 224 aa20.45■□□□□ 0.86
CHCHD7-208ENST00000518944 SENP3Q9H4L4 574 aaPredicted RBP18.81■□□□□ 0.6
CHCHD7-208ENST00000518944 PHF23Q9BUL5 403 aaPredicted RBP18.54■□□□□ 0.56
CHCHD7-208ENST00000518944 POTEDQ86YR6 584 aa17.9■□□□□ 0.46
CHCHD7-208ENST00000518944 FOXD1Q16676 465 aa17.76■□□□□ 0.43
CHCHD7-208ENST00000518944 MSH5O43196 834 aa16.78■□□□□ 0.28
CHCHD7-208ENST00000518944 PIAS4Q8N2W9 510 aaPredicted RBP16.33■□□□□ 0.2
CHCHD7-208ENST00000518944 PPP6R1Q9UPN7 881 aa16.04■□□□□ 0.16
CHCHD7-208ENST00000518944 ADRA2BP18089 450 aa15.92■□□□□ 0.14
CHCHD7-208ENST00000518944 PLPPR3Q6T4P5 718 aa15.62■□□□□ 0.09
CHCHD7-208ENST00000518944 CACNB1Q02641 598 aaPredicted RBP14.96□□□□□ -0.01
CHCHD7-208ENST00000518944 MAPK8IP2Q13387 824 aaPredicted RBP14.9□□□□□ -0.02
CHCHD7-208ENST00000518944 DMRT2Q9Y5R5 561 aa14.84□□□□□ -0.03
CHCHD7-208ENST00000518944 SCAF1Q9H7N4 1312 aaKnown RBP14.36□□□□□ -0.11
CHCHD7-208ENST00000518944 RNF39Q9H2S5 420 aa14.32□□□□□ -0.12
CHCHD7-208ENST00000518944 DCAF8L1A6NGE4 600 aa14.28□□□□□ -0.12
CHCHD7-208ENST00000518944 C1QBPQ07021 282 aaKnown RBP14□□□□□ -0.17
CHCHD7-208ENST00000518944 HOXD11P31277 338 aaPredicted RBP13.97□□□□□ -0.17
CHCHD7-208ENST00000518944 POTEHQ6S545 545 aa13.82□□□□□ -0.2
CHCHD7-208ENST00000518944 PPP4R3CPQ6ZMV5 832 aa13.66□□□□□ -0.22
CHCHD7-208ENST00000518944 RNF216Q9NWF9 866 aaPredicted RBP13.61□□□□□ -0.23
CHCHD7-208ENST00000518944 CNKSR2Q8WXI2 1034 aa13.53□□□□□ -0.24
CHCHD7-208ENST00000518944 DNAJC5BQ9UF47 199 aa13.53□□□□□ -0.24
CHCHD7-208ENST00000518944 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.29□□□□□ -0.285e-9■□□□□ 9.4
CHCHD7-208ENST00000518944 DSG3P32926 999 aa13.16□□□□□ -0.3
CHCHD7-208ENST00000518944 NCBP3Q53F19 620 aaKnown RBP13.09□□□□□ -0.31
CHCHD7-208ENST00000518944 SPINK5Q9NQ38 1064 aaPredicted RBP13.08□□□□□ -0.32
CHCHD7-208ENST00000518944 CAPN15O75808 1086 aa13.02□□□□□ -0.33
CHCHD7-208ENST00000518944 U3KPZ7 1027 aaPredicted RBP12.99□□□□□ -0.33
CHCHD7-208ENST00000518944 NPM3O75607 178 aaKnown RBP12.72□□□□□ -0.37
CHCHD7-208ENST00000518944 ABCB7O75027 752 aa12.71□□□□□ -0.37
CHCHD7-208ENST00000518944 TRHP20396 242 aaPredicted RBP12.63□□□□□ -0.39
CHCHD7-208ENST00000518944 CHRDL2Q6WN34 429 aa12.59□□□□□ -0.39
CHCHD7-208ENST00000518944 SP7Q8TDD2 431 aaPredicted RBP12.56□□□□□ -0.4
CHCHD7-208ENST00000518944 KCNA4P22459 653 aa12.54□□□□□ -0.4
CHCHD7-208ENST00000518944 ZNF219Q9P2Y4 722 aaPredicted RBP12.47□□□□□ -0.41
CHCHD7-208ENST00000518944 RBM42Q9BTD8 480 aaKnown RBP12.44□□□□□ -0.42
CHCHD7-208ENST00000518944 SLC4A2P04920 1241 aa12.4□□□□□ -0.42
CHCHD7-208ENST00000518944 APLP2Q06481 763 aa12.32□□□□□ -0.44
CHCHD7-208ENST00000518944 PIP4P2Q8N4L2 257 aa12.16□□□□□ -0.46
CHCHD7-208ENST00000518944 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.14□□□□□ -0.47
CHCHD7-208ENST00000518944 HNRNPUL2Q1KMD3 747 aaKnown RBP12.14□□□□□ -0.47
CHCHD7-208ENST00000518944 HAX1O00165 279 aa12.12□□□□□ -0.47
CHCHD7-208ENST00000518944 POLA2Q14181 598 aa12.11□□□□□ -0.47
CHCHD7-208ENST00000518944 SAMD1Q6SPF0 538 aaPredicted RBP12.08□□□□□ -0.48
CHCHD7-208ENST00000518944 EVX2Q03828 476 aa12.05□□□□□ -0.48
CHCHD7-208ENST00000518944 AKT1S1Q96B36 256 aa12.04□□□□□ -0.48
CHCHD7-208ENST00000518944 REM2Q8IYK8 340 aaPredicted RBP12□□□□□ -0.49
CHCHD7-208ENST00000518944 SLC4A1APQ9BWU0 796 aaKnown RBP11.97□□□□□ -0.49
CHCHD7-208ENST00000518944 FXR2P51116 673 aaKnown RBP eCLIP11.93□□□□□ -0.5
CHCHD7-208ENST00000518944 PITPNM1O00562 1244 aa11.89□□□□□ -0.51
CHCHD7-208ENST00000518944 MYCNP04198 464 aaPredicted RBP11.86□□□□□ -0.51
CHCHD7-208ENST00000518944 LHX8Q68G74 356 aa11.79□□□□□ -0.52
CHCHD7-208ENST00000518944 OSCARQ8IYS5 282 aa11.77□□□□□ -0.53
CHCHD7-208ENST00000518944 FOXD4L1Q9NU39 408 aa11.77□□□□□ -0.53
CHCHD7-208ENST00000518944 PLSCR2Q9NRY7 297 aa11.74□□□□□ -0.53
CHCHD7-208ENST00000518944 ATF5Q9Y2D1 282 aaPredicted RBP11.66□□□□□ -0.54
CHCHD7-208ENST00000518944 ZBTB12Q9Y330 459 aaPredicted RBP11.64□□□□□ -0.55
CHCHD7-208ENST00000518944 GABBR2O75899 941 aa11.63□□□□□ -0.55
CHCHD7-208ENST00000518944 C19orf67A6NJJ6 358 aa11.58□□□□□ -0.56
CHCHD7-208ENST00000518944 PRKAR2AP13861 404 aaKnown RBP11.55□□□□□ -0.56
CHCHD7-208ENST00000518944 ZBTB22O15209 634 aa11.45□□□□□ -0.58
CHCHD7-208ENST00000518944 POTEIP0CG38 1075 aa11.45□□□□□ -0.58
CHCHD7-208ENST00000518944 ATXN8OSP0DMR3 200 aa11.44□□□□□ -0.58
CHCHD7-208ENST00000518944 CLEC11AQ9Y240 323 aa11.38□□□□□ -0.59
CHCHD7-208ENST00000518944 CHADLQ6NUI6 762 aa11.32□□□□□ -0.6
CHCHD7-208ENST00000518944 SPDYE2BA6NHP3 402 aa11.28□□□□□ -0.6
CHCHD7-208ENST00000518944 SPDYE6P0CI01 402 aa11.28□□□□□ -0.6
CHCHD7-208ENST00000518944 SPDYE2Q495Y8 402 aa11.28□□□□□ -0.6
CHCHD7-208ENST00000518944 SPDYE1Q8NFV5 336 aaPredicted RBP11.28□□□□□ -0.6
CHCHD7-208ENST00000518944 FBLN2P98095 1184 aa11.2□□□□□ -0.62
CHCHD7-208ENST00000518944 POTEMA6NI47 508 aa11.15□□□□□ -0.62
CHCHD7-208ENST00000518944 CD44P16070 742 aaKnown RBP11.13□□□□□ -0.63
CHCHD7-208ENST00000518944 OTUD5Q96G74 571 aa11.13□□□□□ -0.63
CHCHD7-208ENST00000518944 SSUH2Q9Y2M2 353 aa11.1□□□□□ -0.63
CHCHD7-208ENST00000518944 POTEGQ6S5H5 508 aa11.09□□□□□ -0.63
CHCHD7-208ENST00000518944 CSRNP3Q8WYN3 585 aa11.08□□□□□ -0.64
CHCHD7-208ENST00000518944 EHMT2Q96KQ7 1210 aa11.08□□□□□ -0.64
CHCHD7-208ENST00000518944 POTEB2H3BUK9 544 aa11.07□□□□□ -0.64
CHCHD7-208ENST00000518944 DCBLD2Q96PD2 775 aa11.07□□□□□ -0.64
CHCHD7-208ENST00000518944 ZNF692Q9BU19 519 aaPredicted RBP11.06□□□□□ -0.64
CHCHD7-208ENST00000518944 MKRN4PQ13434 485 aaPredicted RBP11.05□□□□□ -0.64
CHCHD7-208ENST00000518944 PRR29P0C7W0 189 aa11.04□□□□□ -0.64
CHCHD7-208ENST00000518944 FARP1Q9Y4F1 1045 aaPredicted RBP10.99□□□□□ -0.65
CHCHD7-208ENST00000518944 CLCN6P51797 869 aa10.97□□□□□ -0.65
CHCHD7-208ENST00000518944 GALR2O43603 387 aaPredicted RBP10.9□□□□□ -0.66
CHCHD7-208ENST00000518944 PABPN1Q86U42 306 aaKnown RBP eCLIP10.9□□□□□ -0.66
CHCHD7-208ENST00000518944 ZNF579Q8NAF0 562 aaKnown RBP10.9□□□□□ -0.66
CHCHD7-208ENST00000518944 PCDH10Q9P2E7 1040 aa10.88□□□□□ -0.67
CHCHD7-208ENST00000518944 ZRANB1Q9UGI0 708 aa10.85□□□□□ -0.67
CHCHD7-208ENST00000518944 LCE2DQ5TA82 110 aaPredicted RBP10.83□□□□□ -0.68
CHCHD7-208ENST00000518944 PELP1Q8IZL8 1130 aaKnown RBP10.81□□□□□ -0.68
CHCHD7-208ENST00000518944 POTEJP0CG39 1038 aa10.79□□□□□ -0.68
CHCHD7-208ENST00000518944 FAM163AQ96GL9 167 aaPredicted RBP10.7□□□□□ -0.7
CHCHD7-208ENST00000518944 PHF12Q96QT6 1004 aa10.69□□□□□ -0.7
CHCHD7-208ENST00000518944 CREBZFQ9NS37 354 aa10.64□□□□□ -0.71
CHCHD7-208ENST00000518944 METRNQ9UJH8 293 aa10.64□□□□□ -0.71
CHCHD7-208ENST00000518944 SPDYE4A6NLX3 237 aa10.58□□□□□ -0.72
CHCHD7-208ENST00000518944 STAG3Q9UJ98 1225 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms