RNA–Protein interactions for RNA: ENST00000517983.1

AP003354.2-201, humanhuman

TSL 4 BASIC

Gene AP003354.2, Length 563 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003354.2-201ENST00000517983 AEBP2Q6ZN18 517 aaPredicted RBP20.88■□□□□ 0.93
AP003354.2-201ENST00000517983 CHIC1Q5VXU3 224 aa20.04■□□□□ 0.8
AP003354.2-201ENST00000517983 SENP3Q9H4L4 574 aaPredicted RBP17.7■□□□□ 0.42
AP003354.2-201ENST00000517983 PHF23Q9BUL5 403 aaPredicted RBP17.65■□□□□ 0.42
AP003354.2-201ENST00000517983 POTEDQ86YR6 584 aa16.58■□□□□ 0.24
AP003354.2-201ENST00000517983 FOXD1Q16676 465 aa16.52■□□□□ 0.24
AP003354.2-201ENST00000517983 PLPPR3Q6T4P5 718 aa16.12■□□□□ 0.17
AP003354.2-201ENST00000517983 PPP6R1Q9UPN7 881 aa15.7■□□□□ 0.1
AP003354.2-201ENST00000517983 ADRA2BP18089 450 aa15.68■□□□□ 0.1
AP003354.2-201ENST00000517983 MSH5O43196 834 aa15.51■□□□□ 0.07
AP003354.2-201ENST00000517983 PIAS4Q8N2W9 510 aaPredicted RBP15.49■□□□□ 0.07
AP003354.2-201ENST00000517983 MAPK8IP2Q13387 824 aaPredicted RBP14.34□□□□□ -0.11
AP003354.2-201ENST00000517983 SCAF1Q9H7N4 1312 aaKnown RBP14.25□□□□□ -0.13
AP003354.2-201ENST00000517983 PPP4R3CPQ6ZMV5 832 aa14.21□□□□□ -0.13
AP003354.2-201ENST00000517983 DMRT2Q9Y5R5 561 aa14.08□□□□□ -0.16
AP003354.2-201ENST00000517983 CNKSR2Q8WXI2 1034 aa13.85□□□□□ -0.19
AP003354.2-201ENST00000517983 NCBP3Q53F19 620 aaKnown RBP13.72□□□□□ -0.21
AP003354.2-201ENST00000517983 CACNB1Q02641 598 aaPredicted RBP13.71□□□□□ -0.21
AP003354.2-201ENST00000517983 HOXD11P31277 338 aaPredicted RBP13.66□□□□□ -0.22
AP003354.2-201ENST00000517983 RNF216Q9NWF9 866 aaPredicted RBP13.64□□□□□ -0.23
AP003354.2-201ENST00000517983 DCAF8L1A6NGE4 600 aa13.59□□□□□ -0.23
AP003354.2-201ENST00000517983 KCNA4P22459 653 aa13.56□□□□□ -0.24
AP003354.2-201ENST00000517983 NPM3O75607 178 aaKnown RBP13.55□□□□□ -0.24
AP003354.2-201ENST00000517983 RNF39Q9H2S5 420 aa13.19□□□□□ -0.3
AP003354.2-201ENST00000517983 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.08□□□□□ -0.32
AP003354.2-201ENST00000517983 DNAJC5BQ9UF47 199 aa13.08□□□□□ -0.32
AP003354.2-201ENST00000517983 C1QBPQ07021 282 aaKnown RBP13□□□□□ -0.33
AP003354.2-201ENST00000517983 SLC4A2P04920 1241 aa12.88□□□□□ -0.35
AP003354.2-201ENST00000517983 SLC4A1APQ9BWU0 796 aaKnown RBP12.84□□□□□ -0.35
AP003354.2-201ENST00000517983 POTEHQ6S545 545 aa12.81□□□□□ -0.36
AP003354.2-201ENST00000517983 U3KPZ7 1027 aaPredicted RBP12.81□□□□□ -0.36
AP003354.2-201ENST00000517983 SPINK5Q9NQ38 1064 aaPredicted RBP12.59□□□□□ -0.39
AP003354.2-201ENST00000517983 CAPN15O75808 1086 aa12.55□□□□□ -0.4
AP003354.2-201ENST00000517983 FOXD4L1Q9NU39 408 aa12.51□□□□□ -0.41
AP003354.2-201ENST00000517983 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.48□□□□□ -0.41
AP003354.2-201ENST00000517983 MYCNP04198 464 aaPredicted RBP12.48□□□□□ -0.41
AP003354.2-201ENST00000517983 HNRNPUL2Q1KMD3 747 aaKnown RBP12.48□□□□□ -0.41
AP003354.2-201ENST00000517983 ZBTB22O15209 634 aa12.46□□□□□ -0.41
AP003354.2-201ENST00000517983 EHMT2Q96KQ7 1210 aa12.45□□□□□ -0.42
AP003354.2-201ENST00000517983 SAMD1Q6SPF0 538 aaPredicted RBP12.44□□□□□ -0.42
AP003354.2-201ENST00000517983 TRHP20396 242 aaPredicted RBP12.43□□□□□ -0.42
AP003354.2-201ENST00000517983 APLP2Q06481 763 aa12.42□□□□□ -0.42
AP003354.2-201ENST00000517983 DSG3P32926 999 aa12.38□□□□□ -0.43
AP003354.2-201ENST00000517983 ZNF219Q9P2Y4 722 aaPredicted RBP12.33□□□□□ -0.44
AP003354.2-201ENST00000517983 ABCB7O75027 752 aa12.3□□□□□ -0.44
AP003354.2-201ENST00000517983 ATF5Q9Y2D1 282 aaPredicted RBP12.26□□□□□ -0.45
AP003354.2-201ENST00000517983 CSRNP3Q8WYN3 585 aa12.15□□□□□ -0.46
AP003354.2-201ENST00000517983 POLA2Q14181 598 aa12.14□□□□□ -0.47
AP003354.2-201ENST00000517983 ATXN8OSP0DMR3 200 aa12.07□□□□□ -0.48
AP003354.2-201ENST00000517983 ZBTB12Q9Y330 459 aaPredicted RBP11.82□□□□□ -0.52
AP003354.2-201ENST00000517983 RBM42Q9BTD8 480 aaKnown RBP11.75□□□□□ -0.53
AP003354.2-201ENST00000517983 OSCARQ8IYS5 282 aa11.72□□□□□ -0.53
AP003354.2-201ENST00000517983 FBLN2P98095 1184 aa11.7□□□□□ -0.54
AP003354.2-201ENST00000517983 MKRN4PQ13434 485 aaPredicted RBP11.68□□□□□ -0.54
AP003354.2-201ENST00000517983 AKT1S1Q96B36 256 aa11.57□□□□□ -0.56
AP003354.2-201ENST00000517983 CHRDL2Q6WN34 429 aa11.54□□□□□ -0.56
AP003354.2-201ENST00000517983 SP7Q8TDD2 431 aaPredicted RBP11.53□□□□□ -0.56
AP003354.2-201ENST00000517983 SPDYE2BA6NHP3 402 aa11.51□□□□□ -0.57
AP003354.2-201ENST00000517983 SPDYE6P0CI01 402 aa11.51□□□□□ -0.57
AP003354.2-201ENST00000517983 SPDYE2Q495Y8 402 aa11.51□□□□□ -0.57
AP003354.2-201ENST00000517983 REM2Q8IYK8 340 aaPredicted RBP11.49□□□□□ -0.57
AP003354.2-201ENST00000517983 ZNF692Q9BU19 519 aaPredicted RBP11.47□□□□□ -0.57
AP003354.2-201ENST00000517983 SSUH2Q9Y2M2 353 aa11.38□□□□□ -0.59
AP003354.2-201ENST00000517983 PITPNM1O00562 1244 aa11.36□□□□□ -0.59
AP003354.2-201ENST00000517983 PABPN1Q86U42 306 aaKnown RBP eCLIP11.31□□□□□ -0.6
AP003354.2-201ENST00000517983 CLEC11AQ9Y240 323 aa11.29□□□□□ -0.6
AP003354.2-201ENST00000517983 SPDYE4A6NLX3 237 aa11.26□□□□□ -0.61
AP003354.2-201ENST00000517983 SPDYE1Q8NFV5 336 aaPredicted RBP11.26□□□□□ -0.61
AP003354.2-201ENST00000517983 PIP4P2Q8N4L2 257 aa11.24□□□□□ -0.61
AP003354.2-201ENST00000517983 FXR2P51116 673 aaKnown RBP eCLIP11.18□□□□□ -0.62
AP003354.2-201ENST00000517983 PRR29P0C7W0 189 aa11.12□□□□□ -0.63
AP003354.2-201ENST00000517983 PRKAR2AP13861 404 aaKnown RBP11.08□□□□□ -0.64
AP003354.2-201ENST00000517983 CHADLQ6NUI6 762 aa11.06□□□□□ -0.64
AP003354.2-201ENST00000517983 HAX1O00165 279 aa11.02□□□□□ -0.65
AP003354.2-201ENST00000517983 FKBP8Q14318 412 aa11.01□□□□□ -0.65
AP003354.2-201ENST00000517983 PLSCR2Q9NRY7 297 aa11.01□□□□□ -0.65
AP003354.2-201ENST00000517983 STAG3Q9UJ98 1225 aa11.01□□□□□ -0.65
AP003354.2-201ENST00000517983 PROM2Q8N271 834 aa10.97□□□□□ -0.65
AP003354.2-201ENST00000517983 EVX2Q03828 476 aa10.9□□□□□ -0.66
AP003354.2-201ENST00000517983 CREBZFQ9NS37 354 aa10.9□□□□□ -0.66
AP003354.2-201ENST00000517983 FARP1Q9Y4F1 1045 aaPredicted RBP10.87□□□□□ -0.67
AP003354.2-201ENST00000517983 C19orf67A6NJJ6 358 aa10.82□□□□□ -0.68
AP003354.2-201ENST00000517983 LHX8Q68G74 356 aa10.8□□□□□ -0.68
AP003354.2-201ENST00000517983 MIER1Q8N108 512 aa10.75□□□□□ -0.69
AP003354.2-201ENST00000517983 CD44P16070 742 aaKnown RBP10.74□□□□□ -0.69
AP003354.2-201ENST00000517983 MNX1P50219 401 aaPredicted RBP10.73□□□□□ -0.69
AP003354.2-201ENST00000517983 SLC24A1O60721 1099 aa10.7□□□□□ -0.7
AP003354.2-201ENST00000517983 AMER1Q5JTC6 1135 aaPredicted RBP10.7□□□□□ -0.7
AP003354.2-201ENST00000517983 NPM1P06748 294 aaKnown RBP eCLIP10.68□□□□□ -0.7
AP003354.2-201ENST00000517983 PLCD3Q8N3E9 789 aa10.68□□□□□ -0.7
AP003354.2-201ENST00000517983 PLEKHG5O94827 1062 aa10.65□□□□□ -0.7
AP003354.2-201ENST00000517983 ZRANB1Q9UGI0 708 aa10.65□□□□□ -0.7
AP003354.2-201ENST00000517983 GABBR2O75899 941 aa10.64□□□□□ -0.71
AP003354.2-201ENST00000517983 FBXO3Q9UK99 471 aa10.63□□□□□ -0.71
AP003354.2-201ENST00000517983 RTN4Q9NQC3 1192 aaKnown RBP10.62□□□□□ -0.71
AP003354.2-201ENST00000517983 PAK3O75914 559 aaPredicted RBP10.57□□□□□ -0.72
AP003354.2-201ENST00000517983 TSPYL2Q9H2G4 693 aaPredicted RBP10.57□□□□□ -0.72
AP003354.2-201ENST00000517983 ZNF579Q8NAF0 562 aaKnown RBP10.54□□□□□ -0.72
AP003354.2-201ENST00000517983 PHF12Q96QT6 1004 aa10.53□□□□□ -0.72
AP003354.2-201ENST00000517983 VASPP50552 380 aaPredicted RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 148.8 ms