RNA–Protein interactions for RNA: ENST00000517561.1

AP3B1-202, Transcript of adaptor related protein complex 3 subunit beta 1, humanhuman

TSL 5

Gene AP3B1, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1-202ENST00000517561 AEBP2Q6ZN18 517 aaPredicted RBP31.05■■■□□ 2.56
AP3B1-202ENST00000517561 CHIC1Q5VXU3 224 aa30.16■■■□□ 2.42
AP3B1-202ENST00000517561 PHF23Q9BUL5 403 aaPredicted RBP26.55■■□□□ 1.84
AP3B1-202ENST00000517561 SENP3Q9H4L4 574 aaPredicted RBP26.31■■□□□ 1.8
AP3B1-202ENST00000517561 FOXD1Q16676 465 aa24.48■■□□□ 1.51
AP3B1-202ENST00000517561 PLPPR3Q6T4P5 718 aa24.42■■□□□ 1.5
AP3B1-202ENST00000517561 PPP6R1Q9UPN7 881 aa23.49■■□□□ 1.35
AP3B1-202ENST00000517561 ADRA2BP18089 450 aa23.46■■□□□ 1.35
AP3B1-202ENST00000517561 PIAS4Q8N2W9 510 aaPredicted RBP23.04■■□□□ 1.28
AP3B1-202ENST00000517561 MSH5O43196 834 aa22.57■■□□□ 1.2
AP3B1-202ENST00000517561 PPP4R3CPQ6ZMV5 832 aa21.53■■□□□ 1.04
AP3B1-202ENST00000517561 SCAF1Q9H7N4 1312 aaKnown RBP21.39■■□□□ 1.01
AP3B1-202ENST00000517561 MAPK8IP2Q13387 824 aaPredicted RBP21.34■■□□□ 1.01
AP3B1-202ENST00000517561 POTEDQ86YR6 584 aa21.02■□□□□ 0.96
AP3B1-202ENST00000517561 DMRT2Q9Y5R5 561 aa20.99■□□□□ 0.95
AP3B1-202ENST00000517561 CNKSR2Q8WXI2 1034 aa20.93■□□□□ 0.94
AP3B1-202ENST00000517561 KCNA4P22459 653 aa20.9■□□□□ 0.94
AP3B1-202ENST00000517561 NCBP3Q53F19 620 aaKnown RBP20.89■□□□□ 0.93
AP3B1-202ENST00000517561 NPM3O75607 178 aaKnown RBP20.63■□□□□ 0.89
AP3B1-202ENST00000517561 RNF216Q9NWF9 866 aaPredicted RBP20.54■□□□□ 0.88
AP3B1-202ENST00000517561 HOXD11P31277 338 aaPredicted RBP20.5■□□□□ 0.87
AP3B1-202ENST00000517561 DCAF8L1A6NGE4 600 aa20.14■□□□□ 0.81
AP3B1-202ENST00000517561 DNAJC5BQ9UF47 199 aa19.97■□□□□ 0.79
AP3B1-202ENST00000517561 SLC4A1APQ9BWU0 796 aaKnown RBP19.87■□□□□ 0.77
AP3B1-202ENST00000517561 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.57■□□□□ 0.72
AP3B1-202ENST00000517561 SLC4A2P04920 1241 aa19.52■□□□□ 0.72
AP3B1-202ENST00000517561 RNF39Q9H2S5 420 aa19.36■□□□□ 0.69
AP3B1-202ENST00000517561 ZBTB22O15209 634 aa19.25■□□□□ 0.67
AP3B1-202ENST00000517561 FOXD4L1Q9NU39 408 aa19.24■□□□□ 0.67
AP3B1-202ENST00000517561 U3KPZ7 1027 aaPredicted RBP19.24■□□□□ 0.67
AP3B1-202ENST00000517561 EHMT2Q96KQ7 1210 aa19.18■□□□□ 0.66
AP3B1-202ENST00000517561 C1QBPQ07021 282 aaKnown RBP19.09■□□□□ 0.65
AP3B1-202ENST00000517561 MYCNP04198 464 aaPredicted RBP19.02■□□□□ 0.64
AP3B1-202ENST00000517561 CSRNP3Q8WYN3 585 aa19.02■□□□□ 0.64
AP3B1-202ENST00000517561 CACNB1Q02641 598 aaPredicted RBP18.96■□□□□ 0.63
AP3B1-202ENST00000517561 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.9■□□□□ 0.62
AP3B1-202ENST00000517561 HNRNPUL2Q1KMD3 747 aaKnown RBP18.9■□□□□ 0.62
AP3B1-202ENST00000517561 SAMD1Q6SPF0 538 aaPredicted RBP18.84■□□□□ 0.61
AP3B1-202ENST00000517561 SPINK5Q9NQ38 1064 aaPredicted RBP18.76■□□□□ 0.59
AP3B1-202ENST00000517561 APLP2Q06481 763 aa18.71■□□□□ 0.59
AP3B1-202ENST00000517561 CAPN15O75808 1086 aa18.68■□□□□ 0.58
AP3B1-202ENST00000517561 ATF5Q9Y2D1 282 aaPredicted RBP18.6■□□□□ 0.57
AP3B1-202ENST00000517561 TRHP20396 242 aaPredicted RBP18.57■□□□□ 0.56
AP3B1-202ENST00000517561 ATXN8OSP0DMR3 200 aa18.56■□□□□ 0.56
AP3B1-202ENST00000517561 ZNF219Q9P2Y4 722 aaPredicted RBP18.5■□□□□ 0.55
AP3B1-202ENST00000517561 DSG3P32926 999 aa18.38■□□□□ 0.53
AP3B1-202ENST00000517561 ABCB7O75027 752 aa18.33■□□□□ 0.52
AP3B1-202ENST00000517561 POLA2Q14181 598 aa18.24■□□□□ 0.51
AP3B1-202ENST00000517561 ZBTB12Q9Y330 459 aaPredicted RBP17.85■□□□□ 0.45
AP3B1-202ENST00000517561 FBLN2P98095 1184 aa17.76■□□□□ 0.43
AP3B1-202ENST00000517561 MKRN4PQ13434 485 aaPredicted RBP17.76■□□□□ 0.43
AP3B1-202ENST00000517561 OSCARQ8IYS5 282 aa17.61■□□□□ 0.41
AP3B1-202ENST00000517561 RBM42Q9BTD8 480 aaKnown RBP17.47■□□□□ 0.39
AP3B1-202ENST00000517561 SPDYE2BA6NHP3 402 aa17.38■□□□□ 0.37
AP3B1-202ENST00000517561 SPDYE6P0CI01 402 aa17.38■□□□□ 0.37
AP3B1-202ENST00000517561 SPDYE2Q495Y8 402 aa17.38■□□□□ 0.37
AP3B1-202ENST00000517561 ZNF692Q9BU19 519 aaPredicted RBP17.34■□□□□ 0.37
AP3B1-202ENST00000517561 SPDYE4A6NLX3 237 aa17.29■□□□□ 0.36
AP3B1-202ENST00000517561 AKT1S1Q96B36 256 aa17.25■□□□□ 0.35
AP3B1-202ENST00000517561 SSUH2Q9Y2M2 353 aa17.24■□□□□ 0.35
AP3B1-202ENST00000517561 FKBP8Q14318 412 aa17.19■□□□□ 0.34
AP3B1-202ENST00000517561 REM2Q8IYK8 340 aaPredicted RBP17.12■□□□□ 0.33
AP3B1-202ENST00000517561 PABPN1Q86U42 306 aaKnown RBP eCLIP17.1■□□□□ 0.33
AP3B1-202ENST00000517561 PROM2Q8N271 834 aa16.95■□□□□ 0.3
AP3B1-202ENST00000517561 PITPNM1O00562 1244 aa16.93■□□□□ 0.3
AP3B1-202ENST00000517561 SPDYE1Q8NFV5 336 aaPredicted RBP16.91■□□□□ 0.3
AP3B1-202ENST00000517561 CLEC11AQ9Y240 323 aa16.88■□□□□ 0.29
AP3B1-202ENST00000517561 CHRDL2Q6WN34 429 aa16.84■□□□□ 0.29
AP3B1-202ENST00000517561 STAG3Q9UJ98 1225 aa16.75■□□□□ 0.27
AP3B1-202ENST00000517561 PRR29P0C7W0 189 aa16.7■□□□□ 0.26
AP3B1-202ENST00000517561 FXR2P51116 673 aaKnown RBP eCLIP16.62■□□□□ 0.25
AP3B1-202ENST00000517561 PIP4P2Q8N4L2 257 aa16.61■□□□□ 0.25
AP3B1-202ENST00000517561 FBXO3Q9UK99 471 aa16.58■□□□□ 0.24
AP3B1-202ENST00000517561 PRKAR2AP13861 404 aaKnown RBP16.5■□□□□ 0.23
AP3B1-202ENST00000517561 CHADLQ6NUI6 762 aa16.5■□□□□ 0.23
AP3B1-202ENST00000517561 POTEHQ6S545 545 aa16.47■□□□□ 0.23
AP3B1-202ENST00000517561 CREBZFQ9NS37 354 aa16.46■□□□□ 0.23
AP3B1-202ENST00000517561 MIER1Q8N108 512 aa16.42■□□□□ 0.22
AP3B1-202ENST00000517561 VASPP50552 380 aaPredicted RBP16.37■□□□□ 0.21
AP3B1-202ENST00000517561 PLCD3Q8N3E9 789 aa16.37■□□□□ 0.21
AP3B1-202ENST00000517561 PLEKHG5O94827 1062 aa16.3■□□□□ 0.2
AP3B1-202ENST00000517561 FARP1Q9Y4F1 1045 aaPredicted RBP16.3■□□□□ 0.2
AP3B1-202ENST00000517561 MNX1P50219 401 aaPredicted RBP16.27■□□□□ 0.2
AP3B1-202ENST00000517561 IFNLR1Q8IU57 520 aaPredicted RBP16.17■□□□□ 0.18
AP3B1-202ENST00000517561 KLHL34Q8N239 644 aa16.16■□□□□ 0.18
AP3B1-202ENST00000517561 NPM1P06748 294 aaKnown RBP eCLIP16.15■□□□□ 0.18
AP3B1-202ENST00000517561 ZBTB47Q9UFB7 747 aaPredicted RBP16.15■□□□□ 0.18
AP3B1-202ENST00000517561 HAX1O00165 279 aa16.12■□□□□ 0.17
AP3B1-202ENST00000517561 C19orf67A6NJJ6 358 aa16.06■□□□□ 0.16
AP3B1-202ENST00000517561 CD44P16070 742 aaKnown RBP16.01■□□□□ 0.15
AP3B1-202ENST00000517561 NUBP1P53384 320 aa16.01■□□□□ 0.15
AP3B1-202ENST00000517561 EVX2Q03828 476 aa16.01■□□□□ 0.15
AP3B1-202ENST00000517561 RASEFQ8IZ41 740 aa15.98■□□□□ 0.15
AP3B1-202ENST00000517561 SPOCK2Q92563 424 aa15.98■□□□□ 0.15
AP3B1-202ENST00000517561 TSPYL2Q9H2G4 693 aaPredicted RBP15.93■□□□□ 0.14
AP3B1-202ENST00000517561 ZRANB1Q9UGI0 708 aa15.92■□□□□ 0.14
AP3B1-202ENST00000517561 PAK3O75914 559 aaPredicted RBP15.9■□□□□ 0.14
AP3B1-202ENST00000517561 DCAF8Q5TAQ9 597 aa15.85■□□□□ 0.13
AP3B1-202ENST00000517561 FAM212AQ96EL1 285 aa15.85■□□□□ 0.13
AP3B1-202ENST00000517561 CCDC61Q9Y6R9 512 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms