RNA–Protein interactions for RNA: ENST00000517543.1

PAICSP4-201, Transcript of phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase pseudogene 4, humanhuman

BASIC

Gene PAICSP4, Length 1,253 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAICSP4-201ENST00000517543 AEBP2Q6ZN18 517 aaPredicted RBP20.87■□□□□ 0.93
PAICSP4-201ENST00000517543 CHIC1Q5VXU3 224 aa20.33■□□□□ 0.85
PAICSP4-201ENST00000517543 PHF23Q9BUL5 403 aaPredicted RBP17.89■□□□□ 0.45
PAICSP4-201ENST00000517543 SENP3Q9H4L4 574 aaPredicted RBP17.68■□□□□ 0.42
PAICSP4-201ENST00000517543 PLPPR3Q6T4P5 718 aa16.47■□□□□ 0.23
PAICSP4-201ENST00000517543 FOXD1Q16676 465 aa16.43■□□□□ 0.22
PAICSP4-201ENST00000517543 PPP6R1Q9UPN7 881 aa15.79■□□□□ 0.12
PAICSP4-201ENST00000517543 ADRA2BP18089 450 aa15.77■□□□□ 0.12
PAICSP4-201ENST00000517543 PIAS4Q8N2W9 510 aaPredicted RBP15.49■□□□□ 0.07
PAICSP4-201ENST00000517543 MSH5O43196 834 aa15.14■□□□□ 0.01
PAICSP4-201ENST00000517543 PPP4R3CPQ6ZMV5 832 aa14.52□□□□□ -0.09
PAICSP4-201ENST00000517543 SCAF1Q9H7N4 1312 aaKnown RBP14.38□□□□□ -0.11
PAICSP4-201ENST00000517543 MAPK8IP2Q13387 824 aaPredicted RBP14.31□□□□□ -0.12
PAICSP4-201ENST00000517543 KCNA4P22459 653 aa14.17□□□□□ -0.14
PAICSP4-201ENST00000517543 DMRT2Q9Y5R5 561 aa14.12□□□□□ -0.15
PAICSP4-201ENST00000517543 CNKSR2Q8WXI2 1034 aa14.11□□□□□ -0.15
PAICSP4-201ENST00000517543 NCBP3Q53F19 620 aaKnown RBP14.09□□□□□ -0.15
PAICSP4-201ENST00000517543 NPM3O75607 178 aaKnown RBP13.94□□□□□ -0.18
PAICSP4-201ENST00000517543 POTEDQ86YR6 584 aa13.87□□□□□ -0.19
PAICSP4-201ENST00000517543 RNF216Q9NWF9 866 aaPredicted RBP13.84□□□□□ -0.19
PAICSP4-201ENST00000517543 HOXD11P31277 338 aaPredicted RBP13.8□□□□□ -0.2
PAICSP4-201ENST00000517543 DNAJC5BQ9UF47 199 aa13.52□□□□□ -0.25
PAICSP4-201ENST00000517543 DCAF8L1A6NGE4 600 aa13.5□□□□□ -0.25
PAICSP4-201ENST00000517543 SLC4A1APQ9BWU0 796 aaKnown RBP13.47□□□□□ -0.25
PAICSP4-201ENST00000517543 SLC4A2P04920 1241 aa13.18□□□□□ -0.3
PAICSP4-201ENST00000517543 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.14□□□□□ -0.31
PAICSP4-201ENST00000517543 ZBTB22O15209 634 aa13.06□□□□□ -0.32
PAICSP4-201ENST00000517543 EHMT2Q96KQ7 1210 aa13.06□□□□□ -0.32
PAICSP4-201ENST00000517543 FOXD4L1Q9NU39 408 aa13.03□□□□□ -0.32
PAICSP4-201ENST00000517543 RNF39Q9H2S5 420 aa12.99□□□□□ -0.33
PAICSP4-201ENST00000517543 U3KPZ7 1027 aaPredicted RBP12.96□□□□□ -0.33
PAICSP4-201ENST00000517543 CSRNP3Q8WYN3 585 aa12.92□□□□□ -0.34
PAICSP4-201ENST00000517543 MYCNP04198 464 aaPredicted RBP12.86□□□□□ -0.35
PAICSP4-201ENST00000517543 C1QBPQ07021 282 aaKnown RBP12.81□□□□□ -0.36
PAICSP4-201ENST00000517543 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.73□□□□□ -0.37
PAICSP4-201ENST00000517543 HNRNPUL2Q1KMD3 747 aaKnown RBP12.73□□□□□ -0.37
PAICSP4-201ENST00000517543 SAMD1Q6SPF0 538 aaPredicted RBP12.71□□□□□ -0.37
PAICSP4-201ENST00000517543 CACNB1Q02641 598 aaPredicted RBP12.65□□□□□ -0.38
PAICSP4-201ENST00000517543 SPINK5Q9NQ38 1064 aaPredicted RBP12.61□□□□□ -0.39
PAICSP4-201ENST00000517543 APLP2Q06481 763 aa12.6□□□□□ -0.39
PAICSP4-201ENST00000517543 ATXN8OSP0DMR3 200 aa12.56□□□□□ -0.4
PAICSP4-201ENST00000517543 ATF5Q9Y2D1 282 aaPredicted RBP12.55□□□□□ -0.4
PAICSP4-201ENST00000517543 CAPN15O75808 1086 aa12.53□□□□□ -0.4
PAICSP4-201ENST00000517543 TRHP20396 242 aaPredicted RBP12.46□□□□□ -0.41
PAICSP4-201ENST00000517543 ZNF219Q9P2Y4 722 aaPredicted RBP12.46□□□□□ -0.41
PAICSP4-201ENST00000517543 DSG3P32926 999 aa12.35□□□□□ -0.43
PAICSP4-201ENST00000517543 ABCB7O75027 752 aa12.31□□□□□ -0.44
PAICSP4-201ENST00000517543 POLA2Q14181 598 aa12.26□□□□□ -0.45
PAICSP4-201ENST00000517543 ZBTB12Q9Y330 459 aaPredicted RBP12.04□□□□□ -0.48
PAICSP4-201ENST00000517543 MKRN4PQ13434 485 aaPredicted RBP12.01□□□□□ -0.49
PAICSP4-201ENST00000517543 FBLN2P98095 1184 aa11.98□□□□□ -0.49
PAICSP4-201ENST00000517543 OSCARQ8IYS5 282 aa11.88□□□□□ -0.51
PAICSP4-201ENST00000517543 RBM42Q9BTD8 480 aaKnown RBP11.74□□□□□ -0.53
PAICSP4-201ENST00000517543 SPDYE2BA6NHP3 402 aa11.73□□□□□ -0.53
PAICSP4-201ENST00000517543 SPDYE6P0CI01 402 aa11.73□□□□□ -0.53
PAICSP4-201ENST00000517543 SPDYE2Q495Y8 402 aa11.73□□□□□ -0.53
PAICSP4-201ENST00000517543 SPDYE4A6NLX3 237 aa11.69□□□□□ -0.54
PAICSP4-201ENST00000517543 FKBP8Q14318 412 aa11.68□□□□□ -0.54
PAICSP4-201ENST00000517543 ZNF692Q9BU19 519 aaPredicted RBP11.66□□□□□ -0.54
PAICSP4-201ENST00000517543 SSUH2Q9Y2M2 353 aa11.65□□□□□ -0.54
PAICSP4-201ENST00000517543 AKT1S1Q96B36 256 aa11.59□□□□□ -0.55
PAICSP4-201ENST00000517543 PABPN1Q86U42 306 aaKnown RBP eCLIP11.53□□□□□ -0.56
PAICSP4-201ENST00000517543 PROM2Q8N271 834 aa11.52□□□□□ -0.57
PAICSP4-201ENST00000517543 REM2Q8IYK8 340 aaPredicted RBP11.49□□□□□ -0.57
PAICSP4-201ENST00000517543 PITPNM1O00562 1244 aa11.38□□□□□ -0.59
PAICSP4-201ENST00000517543 SPDYE1Q8NFV5 336 aaPredicted RBP11.38□□□□□ -0.59
PAICSP4-201ENST00000517543 CLEC11AQ9Y240 323 aa11.34□□□□□ -0.59
PAICSP4-201ENST00000517543 CHRDL2Q6WN34 429 aa11.29□□□□□ -0.6
PAICSP4-201ENST00000517543 STAG3Q9UJ98 1225 aa11.29□□□□□ -0.6
PAICSP4-201ENST00000517543 FBXO3Q9UK99 471 aa11.24□□□□□ -0.61
PAICSP4-201ENST00000517543 PRR29P0C7W0 189 aa11.22□□□□□ -0.61
PAICSP4-201ENST00000517543 FXR2P51116 673 aaKnown RBP eCLIP11.16□□□□□ -0.62
PAICSP4-201ENST00000517543 PIP4P2Q8N4L2 257 aa11.15□□□□□ -0.62
PAICSP4-201ENST00000517543 VASPP50552 380 aaPredicted RBP11.13□□□□□ -0.63
PAICSP4-201ENST00000517543 CREBZFQ9NS37 354 aa11.1□□□□□ -0.63
PAICSP4-201ENST00000517543 PRKAR2AP13861 404 aaKnown RBP11.08□□□□□ -0.64
PAICSP4-201ENST00000517543 CHADLQ6NUI6 762 aa11.08□□□□□ -0.64
PAICSP4-201ENST00000517543 MIER1Q8N108 512 aa11.06□□□□□ -0.64
PAICSP4-201ENST00000517543 PLCD3Q8N3E9 789 aa11.06□□□□□ -0.64
PAICSP4-201ENST00000517543 PLEKHG5O94827 1062 aa11□□□□□ -0.65
PAICSP4-201ENST00000517543 MNX1P50219 401 aaPredicted RBP10.99□□□□□ -0.65
PAICSP4-201ENST00000517543 POTEHQ6S545 545 aa10.97□□□□□ -0.65
PAICSP4-201ENST00000517543 IFNLR1Q8IU57 520 aaPredicted RBP10.97□□□□□ -0.65
PAICSP4-201ENST00000517543 FARP1Q9Y4F1 1045 aaPredicted RBP10.96□□□□□ -0.65
PAICSP4-201ENST00000517543 ZBTB47Q9UFB7 747 aaPredicted RBP10.92□□□□□ -0.66
PAICSP4-201ENST00000517543 KLHL34Q8N239 644 aa10.91□□□□□ -0.66
PAICSP4-201ENST00000517543 NPM1P06748 294 aaKnown RBP eCLIP10.87□□□□□ -0.67
PAICSP4-201ENST00000517543 SPOCK2Q92563 424 aa10.83□□□□□ -0.68
PAICSP4-201ENST00000517543 NUBP1P53384 320 aa10.82□□□□□ -0.68
PAICSP4-201ENST00000517543 RASEFQ8IZ41 740 aa10.79□□□□□ -0.68
PAICSP4-201ENST00000517543 C19orf67A6NJJ6 358 aa10.78□□□□□ -0.68
PAICSP4-201ENST00000517543 HAX1O00165 279 aa10.77□□□□□ -0.69
PAICSP4-201ENST00000517543 CD44P16070 742 aaKnown RBP10.77□□□□□ -0.69
PAICSP4-201ENST00000517543 TSPYL2Q9H2G4 693 aaPredicted RBP10.73□□□□□ -0.69
PAICSP4-201ENST00000517543 FAM212AQ96EL1 285 aa10.72□□□□□ -0.69
PAICSP4-201ENST00000517543 EVX2Q03828 476 aa10.71□□□□□ -0.69
PAICSP4-201ENST00000517543 PAK3O75914 559 aaPredicted RBP10.7□□□□□ -0.7
PAICSP4-201ENST00000517543 ZRANB1Q9UGI0 708 aa10.69□□□□□ -0.7
PAICSP4-201ENST00000517543 DCAF8Q5TAQ9 597 aa10.67□□□□□ -0.7
PAICSP4-201ENST00000517543 GSE1Q14687 1217 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms