RNA–Protein interactions for RNA: ENST00000517535.5

SORBS3-203, Transcript of sorbin and SH3 domain containing 3, humanhuman

TSL 2

Gene SORBS3, Length 3,067 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORBS3-203ENST00000517535 NISCHQ9Y2I1 1504 aa40.25■■■■■ 4.03
SORBS3-203ENST00000517535 SHROOM4Q9ULL8 1493 aa35.55■■■■□ 3.28
SORBS3-203ENST00000517535 SUPT5HO00267 1087 aaKnown RBP34.97■■■■□ 3.19
SORBS3-203ENST00000517535 DCAF8L2P0C7V8 631 aa34.6■■■■□ 3.13
SORBS3-203ENST00000517535 ZCCHC6Q5VYS8 1495 aaKnown RBP34■■■■□ 3.03
SORBS3-203ENST00000517535 CCDC180Q9P1Z9 1646 aa33.62■■■□□ 2.97
SORBS3-203ENST00000517535 CHIC1Q5VXU3 224 aa33.62■■■□□ 2.97
SORBS3-203ENST00000517535 MYO15BQ96JP2 1530 aa33.53■■■□□ 2.96
SORBS3-203ENST00000517535 PCGF6Q9BYE7 350 aa33.2■■■□□ 2.91
SORBS3-203ENST00000517535 LOC105371045A0A1W2PR82 267 aa33.04■■■□□ 2.88
SORBS3-203ENST00000517535 HRCP23327 699 aa32.92■■■□□ 2.86
SORBS3-203ENST00000517535 PPARGC1BQ86YN6 1023 aaKnown RBP32.76■■■□□ 2.83
SORBS3-203ENST00000517535 EHMT2Q96KQ7 1210 aa32.61■■■□□ 2.81
SORBS3-203ENST00000517535 DCAF1Q9Y4B6 1507 aa32.53■■■□□ 2.8
SORBS3-203ENST00000517535 FAM9AQ8IZU1 332 aaPredicted RBP32.49■■■□□ 2.79
SORBS3-203ENST00000517535 SCRIBQ14160 1630 aa32.35■■■□□ 2.77
SORBS3-203ENST00000517535 TRIM41Q8WV44 630 aa32.24■■■□□ 2.75
SORBS3-203ENST00000517535 RSF1Q96T23 1441 aaPredicted RBP32.14■■■□□ 2.74
SORBS3-203ENST00000517535 ABCC9O60706 1549 aa32.09■■■□□ 2.73
SORBS3-203ENST00000517535 TRIM26Q12899 539 aaPredicted RBP32.06■■■□□ 2.72
SORBS3-203ENST00000517535 RB1CC1Q8TDY2 1594 aa31.89■■■□□ 2.7
SORBS3-203ENST00000517535 CECR2Q9BXF3 1484 aa31.77■■■□□ 2.68
SORBS3-203ENST00000517535 TTBK1Q5TCY1 1321 aaPredicted RBP31.53■■■□□ 2.64
SORBS3-203ENST00000517535 MROH2BQ7Z745 1585 aa31.52■■■□□ 2.64
SORBS3-203ENST00000517535 WIZO95785 1651 aa31.34■■■□□ 2.61
SORBS3-203ENST00000517535 NACADO15069 1562 aa31.26■■■□□ 2.6
SORBS3-203ENST00000517535 ZEB1P37275 1124 aaPredicted RBP31.23■■■□□ 2.59
SORBS3-203ENST00000517535 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.2■■■□□ 2.58
SORBS3-203ENST00000517535 CCER1Q8TC90 406 aaPredicted RBP31.02■■■□□ 2.56
SORBS3-203ENST00000517535 PABPN1Q86U42 306 aaKnown RBP eCLIP31■■■□□ 2.552e-7■■■□□ 15.2
SORBS3-203ENST00000517535 ABCC8Q09428 1581 aa30.95■■■□□ 2.54
SORBS3-203ENST00000517535 CCDC88BA6NC98 1476 aa30.85■■■□□ 2.53
SORBS3-203ENST00000517535 BAZ1AQ9NRL2 1556 aaPredicted RBP30.84■■■□□ 2.53
SORBS3-203ENST00000517535 UBTFP17480 764 aaKnown RBP30.84■■■□□ 2.53
SORBS3-203ENST00000517535 SOGA1O94964 1423 aa30.75■■■□□ 2.51
SORBS3-203ENST00000517535 RANGAP1P46060 587 aaPredicted RBP30.71■■■□□ 2.51
SORBS3-203ENST00000517535 SCAF1Q9H7N4 1312 aaKnown RBP30.67■■■□□ 2.5
SORBS3-203ENST00000517535 RUSC2Q8N2Y8 1516 aa30.62■■■□□ 2.49
SORBS3-203ENST00000517535 CEP162Q5TB80 1403 aa30.6■■■□□ 2.49
SORBS3-203ENST00000517535 TOP2AP11388 1531 aaKnown RBP30.59■■■□□ 2.49
SORBS3-203ENST00000517535 EIF4G1Q04637 1599 aaKnown RBP30.59■■■□□ 2.49
SORBS3-203ENST00000517535 CSRNP3Q8WYN3 585 aa30.57■■■□□ 2.48
SORBS3-203ENST00000517535 SMARCA4P51532 1647 aa30.57■■■□□ 2.48
SORBS3-203ENST00000517535 SMARCA2P51531 1590 aa30.52■■■□□ 2.48
SORBS3-203ENST00000517535 HNRNPUL2Q1KMD3 747 aaKnown RBP30.42■■■□□ 2.46
SORBS3-203ENST00000517535 DIEXFQ68CQ4 756 aaKnown RBP30.39■■■□□ 2.46
SORBS3-203ENST00000517535 PELP1Q8IZL8 1130 aaKnown RBP30.33■■■□□ 2.45
SORBS3-203ENST00000517535 TNIKQ9UKE5 1360 aa30.33■■■□□ 2.45
SORBS3-203ENST00000517535 NEUROD1Q13562 356 aa30.31■■■□□ 2.44
SORBS3-203ENST00000517535 UNC13AQ9UPW8 1703 aa30.3■■■□□ 2.44
SORBS3-203ENST00000517535 WRNQ14191 1432 aaPredicted RBP eCLIP30.25■■■□□ 2.43
SORBS3-203ENST00000517535 YTHDC1Q96MU7 727 aaKnown RBP30.18■■■□□ 2.42
SORBS3-203ENST00000517535 ACIN1Q9UKV3 1341 aaKnown RBP30.16■■■□□ 2.42
SORBS3-203ENST00000517535 GOLGA3Q08378 1498 aa30.14■■■□□ 2.42
SORBS3-203ENST00000517535 APLP2Q06481 763 aa30.09■■■□□ 2.41
SORBS3-203ENST00000517535 EEA1Q15075 1411 aa30.06■■■□□ 2.4
SORBS3-203ENST00000517535 GTF3C3Q9Y5Q9 886 aa30.06■■■□□ 2.4
SORBS3-203ENST00000517535 BICRAQ9NZM4 1560 aa30.04■■■□□ 2.4
SORBS3-203ENST00000517535 CLIP1P30622 1438 aa30.01■■■□□ 2.39
SORBS3-203ENST00000517535 SYNJ1O43426 1573 aa29.99■■■□□ 2.39
SORBS3-203ENST00000517535 ZNF316A6NFI3 1004 aaPredicted RBP29.97■■■□□ 2.39
SORBS3-203ENST00000517535 CENPBP07199 599 aaPredicted RBP29.96■■■□□ 2.39
SORBS3-203ENST00000517535 BAZ1BQ9UIG0 1483 aaKnown RBP29.91■■■□□ 2.38
SORBS3-203ENST00000517535 CEP164Q9UPV0 1460 aa29.9■■■□□ 2.38
SORBS3-203ENST00000517535 RAPGEF2Q9Y4G8 1499 aa29.9■■■□□ 2.38
SORBS3-203ENST00000517535 ATAD2BQ9ULI0 1458 aa29.88■■■□□ 2.37
SORBS3-203ENST00000517535 MIER1Q8N108 512 aa29.78■■■□□ 2.36
SORBS3-203ENST00000517535 VPS8Q8N3P4 1428 aa29.73■■■□□ 2.35
SORBS3-203ENST00000517535 ITGAEP38570 1179 aa29.72■■■□□ 2.35
SORBS3-203ENST00000517535 KANK4Q5T7N3 995 aaPredicted RBP29.63■■■□□ 2.33
SORBS3-203ENST00000517535 PEG3Q9GZU2 1588 aa29.63■■■□□ 2.33
SORBS3-203ENST00000517535 KIF21BO75037 1637 aa29.6■■■□□ 2.33
SORBS3-203ENST00000517535 ATP1B4Q9UN42 357 aaPredicted RBP29.38■■■□□ 2.29
SORBS3-203ENST00000517535 TOP2BQ02880 1626 aa29.37■■■□□ 2.29
SORBS3-203ENST00000517535 ARAP1Q96P48 1450 aa29.33■■■□□ 2.29
SORBS3-203ENST00000517535 P3H3Q8IVL6 736 aa29.31■■■□□ 2.28
SORBS3-203ENST00000517535 DHX57Q6P158 1386 aaKnown RBP29.29■■■□□ 2.28
SORBS3-203ENST00000517535 PRXQ9BXM0 1461 aa29.27■■■□□ 2.28
SORBS3-203ENST00000517535 CUX1P39880 1505 aa29.27■■■□□ 2.28
SORBS3-203ENST00000517535 KIF27Q86VH2 1401 aa29.25■■■□□ 2.27
SORBS3-203ENST00000517535 FAM50AQ14320 339 aaKnown RBP29.13■■■□□ 2.25
SORBS3-203ENST00000517535 BIVM-ERCC5R4GMW8 1640 aa29.11■■■□□ 2.25
SORBS3-203ENST00000517535 CUX2O14529 1486 aa29.1■■■□□ 2.25
SORBS3-203ENST00000517535 CCNB3Q8WWL7 1395 aa29.09■■■□□ 2.25
SORBS3-203ENST00000517535 NCAPD3P42695 1498 aa29.08■■■□□ 2.25
SORBS3-203ENST00000517535 ERICH3Q5RHP9 1530 aa29.08■■■□□ 2.25
SORBS3-203ENST00000517535 ARHGAP35Q9NRY4 1499 aa29.07■■■□□ 2.24
SORBS3-203ENST00000517535 CFTRP13569 1480 aa28.99■■■□□ 2.23
SORBS3-203ENST00000517535 KCNH8Q96L42 1107 aa28.99■■■□□ 2.23
SORBS3-203ENST00000517535 HIRIP3Q9BW71 556 aaPredicted RBP28.97■■■□□ 2.23
SORBS3-203ENST00000517535 SIN3AQ96ST3 1273 aa28.97■■■□□ 2.23
SORBS3-203ENST00000517535 IGF1RP08069 1367 aa28.97■■■□□ 2.23
SORBS3-203ENST00000517535 MYT1Q01538 1121 aa28.96■■■□□ 2.23
SORBS3-203ENST00000517535 RAB3GAP2Q9H2M9 1393 aa28.94■■■□□ 2.22
SORBS3-203ENST00000517535 RRBP1Q9P2E9 1410 aaKnown RBP28.94■■■□□ 2.22
SORBS3-203ENST00000517535 HMGXB3Q12766 1538 aa28.93■■■□□ 2.22
SORBS3-203ENST00000517535 CLSPNQ9HAW4 1339 aa28.92■■■□□ 2.22
SORBS3-203ENST00000517535 CARMIL1Q5VZK9 1371 aa28.92■■■□□ 2.22
SORBS3-203ENST00000517535 DDX10Q13206 875 aaKnown RBP28.82■■■□□ 2.2
SORBS3-203ENST00000517535 PHLDB1Q86UU1 1377 aa28.81■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms