RNA–Protein interactions for RNA: ENST00000517194.1

RNU6-1261P-201, Transcript of RNA, U6 small nuclear 1261, pseudogene, humanhuman

BASIC

Gene RNU6-1261P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1261P-201ENST00000517194 AEBP2Q6ZN18 517 aaPredicted RBP18.12■□□□□ 0.49
RNU6-1261P-201ENST00000517194 CHIC1Q5VXU3 224 aa18.05■□□□□ 0.48
RNU6-1261P-201ENST00000517194 PHF23Q9BUL5 403 aaPredicted RBP15.95■□□□□ 0.14
RNU6-1261P-201ENST00000517194 SENP3Q9H4L4 574 aaPredicted RBP15.27■□□□□ 0.04
RNU6-1261P-201ENST00000517194 PLPPR3Q6T4P5 718 aa14.82□□□□□ -0.04
RNU6-1261P-201ENST00000517194 FOXD1Q16676 465 aa14.16□□□□□ -0.14
RNU6-1261P-201ENST00000517194 ADRA2BP18089 450 aa13.96□□□□□ -0.17
RNU6-1261P-201ENST00000517194 PPP6R1Q9UPN7 881 aa13.95□□□□□ -0.18
RNU6-1261P-201ENST00000517194 PIAS4Q8N2W9 510 aaPredicted RBP13.45□□□□□ -0.26
RNU6-1261P-201ENST00000517194 KCNA4P22459 653 aa13.27□□□□□ -0.29
RNU6-1261P-201ENST00000517194 PPP4R3CPQ6ZMV5 832 aa13.13□□□□□ -0.31
RNU6-1261P-201ENST00000517194 MSH5O43196 834 aa12.87□□□□□ -0.35
RNU6-1261P-201ENST00000517194 NCBP3Q53F19 620 aaKnown RBP12.87□□□□□ -0.35
RNU6-1261P-201ENST00000517194 EHMT2Q96KQ7 1210 aa12.8□□□□□ -0.36
RNU6-1261P-201ENST00000517194 SCAF1Q9H7N4 1312 aaKnown RBP12.72□□□□□ -0.37
RNU6-1261P-201ENST00000517194 NPM3O75607 178 aaKnown RBP12.7□□□□□ -0.38
RNU6-1261P-201ENST00000517194 SLC4A1APQ9BWU0 796 aaKnown RBP12.7□□□□□ -0.38
RNU6-1261P-201ENST00000517194 CNKSR2Q8WXI2 1034 aa12.66□□□□□ -0.38
RNU6-1261P-201ENST00000517194 MAPK8IP2Q13387 824 aaPredicted RBP12.57□□□□□ -0.4
RNU6-1261P-201ENST00000517194 CSRNP3Q8WYN3 585 aa12.46□□□□□ -0.41
RNU6-1261P-201ENST00000517194 RNF216Q9NWF9 866 aaPredicted RBP12.3□□□□□ -0.44
RNU6-1261P-201ENST00000517194 DMRT2Q9Y5R5 561 aa12.26□□□□□ -0.45
RNU6-1261P-201ENST00000517194 ZBTB22O15209 634 aa12.22□□□□□ -0.45
RNU6-1261P-201ENST00000517194 DNAJC5BQ9UF47 199 aa12.21□□□□□ -0.45
RNU6-1261P-201ENST00000517194 HOXD11P31277 338 aaPredicted RBP12.15□□□□□ -0.46
RNU6-1261P-201ENST00000517194 FOXD4L1Q9NU39 408 aa12.08□□□□□ -0.48
RNU6-1261P-201ENST00000517194 SLC4A2P04920 1241 aa11.91□□□□□ -0.5
RNU6-1261P-201ENST00000517194 DCAF8L1A6NGE4 600 aa11.76□□□□□ -0.53
RNU6-1261P-201ENST00000517194 MYCNP04198 464 aaPredicted RBP11.7□□□□□ -0.54
RNU6-1261P-201ENST00000517194 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.62□□□□□ -0.55
RNU6-1261P-201ENST00000517194 ATXN8OSP0DMR3 200 aa11.6□□□□□ -0.55
RNU6-1261P-201ENST00000517194 U3KPZ7 1027 aaPredicted RBP11.46□□□□□ -0.57
RNU6-1261P-201ENST00000517194 ATF5Q9Y2D1 282 aaPredicted RBP11.42□□□□□ -0.58
RNU6-1261P-201ENST00000517194 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.41□□□□□ -0.58
RNU6-1261P-201ENST00000517194 HNRNPUL2Q1KMD3 747 aaKnown RBP11.41□□□□□ -0.58
RNU6-1261P-201ENST00000517194 SAMD1Q6SPF0 538 aaPredicted RBP11.4□□□□□ -0.58
RNU6-1261P-201ENST00000517194 FKBP8Q14318 412 aa11.24□□□□□ -0.61
RNU6-1261P-201ENST00000517194 APLP2Q06481 763 aa11.19□□□□□ -0.62
RNU6-1261P-201ENST00000517194 ZNF219Q9P2Y4 722 aaPredicted RBP11.17□□□□□ -0.62
RNU6-1261P-201ENST00000517194 POTEDQ86YR6 584 aa11.09□□□□□ -0.63
RNU6-1261P-201ENST00000517194 RNF39Q9H2S5 420 aa11.09□□□□□ -0.63
RNU6-1261P-201ENST00000517194 SPINK5Q9NQ38 1064 aaPredicted RBP11.05□□□□□ -0.64
RNU6-1261P-201ENST00000517194 TRHP20396 242 aaPredicted RBP11.03□□□□□ -0.64
RNU6-1261P-201ENST00000517194 CAPN15O75808 1086 aa10.98□□□□□ -0.65
RNU6-1261P-201ENST00000517194 C1QBPQ07021 282 aaKnown RBP10.96□□□□□ -0.65
RNU6-1261P-201ENST00000517194 POLA2Q14181 598 aa10.93□□□□□ -0.66
RNU6-1261P-201ENST00000517194 MKRN4PQ13434 485 aaPredicted RBP10.92□□□□□ -0.66
RNU6-1261P-201ENST00000517194 RTN4Q9NQC3 1192 aaKnown RBP10.9□□□□□ -0.66
RNU6-1261P-201ENST00000517194 AMER1Q5JTC6 1135 aaPredicted RBP10.89□□□□□ -0.67
RNU6-1261P-201ENST00000517194 FBLN2P98095 1184 aa10.87□□□□□ -0.67
RNU6-1261P-201ENST00000517194 SPDYE4A6NLX3 237 aa10.85□□□□□ -0.67
RNU6-1261P-201ENST00000517194 ABCB7O75027 752 aa10.82□□□□□ -0.68
RNU6-1261P-201ENST00000517194 ZBTB12Q9Y330 459 aaPredicted RBP10.72□□□□□ -0.69
RNU6-1261P-201ENST00000517194 PROM2Q8N271 834 aa10.7□□□□□ -0.7
RNU6-1261P-201ENST00000517194 FBXO3Q9UK99 471 aa10.7□□□□□ -0.7
RNU6-1261P-201ENST00000517194 DSG3P32926 999 aa10.69□□□□□ -0.7
RNU6-1261P-201ENST00000517194 VASPP50552 380 aaPredicted RBP10.56□□□□□ -0.72
RNU6-1261P-201ENST00000517194 CACNB1Q02641 598 aaPredicted RBP10.54□□□□□ -0.72
RNU6-1261P-201ENST00000517194 OSCARQ8IYS5 282 aa10.53□□□□□ -0.72
RNU6-1261P-201ENST00000517194 ZNF692Q9BU19 519 aaPredicted RBP10.53□□□□□ -0.72
RNU6-1261P-201ENST00000517194 SPDYE2BA6NHP3 402 aa10.48□□□□□ -0.73
RNU6-1261P-201ENST00000517194 SPDYE6P0CI01 402 aa10.48□□□□□ -0.73
RNU6-1261P-201ENST00000517194 SPDYE2Q495Y8 402 aa10.48□□□□□ -0.73
RNU6-1261P-201ENST00000517194 IFNLR1Q8IU57 520 aaPredicted RBP10.47□□□□□ -0.73
RNU6-1261P-201ENST00000517194 SLC24A1O60721 1099 aa10.46□□□□□ -0.73
RNU6-1261P-201ENST00000517194 SSUH2Q9Y2M2 353 aa10.45□□□□□ -0.74
RNU6-1261P-201ENST00000517194 PABPN1Q86U42 306 aaKnown RBP eCLIP10.4□□□□□ -0.74
RNU6-1261P-201ENST00000517194 STAG3Q9UJ98 1225 aa10.36□□□□□ -0.75
RNU6-1261P-201ENST00000517194 KLHL34Q8N239 644 aa10.32□□□□□ -0.76
RNU6-1261P-201ENST00000517194 PLCD3Q8N3E9 789 aa10.29□□□□□ -0.76
RNU6-1261P-201ENST00000517194 MIER1Q8N108 512 aa10.27□□□□□ -0.77
RNU6-1261P-201ENST00000517194 PKD2Q13563 968 aa10.26□□□□□ -0.77
RNU6-1261P-201ENST00000517194 SPOCK2Q92563 424 aa10.26□□□□□ -0.77
RNU6-1261P-201ENST00000517194 DCAF8L2P0C7V8 631 aa10.21□□□□□ -0.77
RNU6-1261P-201ENST00000517194 PLEKHG5O94827 1062 aa10.15□□□□□ -0.78
RNU6-1261P-201ENST00000517194 ECM2O94769 699 aaPredicted RBP10.14□□□□□ -0.79
RNU6-1261P-201ENST00000517194 RBM42Q9BTD8 480 aaKnown RBP10.14□□□□□ -0.79
RNU6-1261P-201ENST00000517194 AKT1S1Q96B36 256 aa10.12□□□□□ -0.79
RNU6-1261P-201ENST00000517194 ZBTB47Q9UFB7 747 aaPredicted RBP10.11□□□□□ -0.79
RNU6-1261P-201ENST00000517194 SPDYE1Q8NFV5 336 aaPredicted RBP10.09□□□□□ -0.79
RNU6-1261P-201ENST00000517194 PLCB2Q00722 1185 aa10.08□□□□□ -0.8
RNU6-1261P-201ENST00000517194 CIZ1Q9ULV3 898 aaPredicted RBP10.07□□□□□ -0.8
RNU6-1261P-201ENST00000517194 CLEC11AQ9Y240 323 aa10.07□□□□□ -0.8
RNU6-1261P-201ENST00000517194 REM2Q8IYK8 340 aaPredicted RBP10.04□□□□□ -0.8
RNU6-1261P-201ENST00000517194 RGL2O15211 777 aa10.02□□□□□ -0.81
RNU6-1261P-201ENST00000517194 PRR29P0C7W0 189 aa10.01□□□□□ -0.81
RNU6-1261P-201ENST00000517194 NPM1P06748 294 aaKnown RBP eCLIP9.98□□□□□ -0.81
RNU6-1261P-201ENST00000517194 CREBZFQ9NS37 354 aa9.97□□□□□ -0.81
RNU6-1261P-201ENST00000517194 NUBP1P53384 320 aa9.95□□□□□ -0.82
RNU6-1261P-201ENST00000517194 HAP1P54257 671 aaPredicted RBP9.95□□□□□ -0.82
RNU6-1261P-201ENST00000517194 BBXQ8WY36 941 aaPredicted RBP9.94□□□□□ -0.82
RNU6-1261P-201ENST00000517194 GSE1Q14687 1217 aa9.93□□□□□ -0.82
RNU6-1261P-201ENST00000517194 PITPNM1O00562 1244 aa9.92□□□□□ -0.82
RNU6-1261P-201ENST00000517194 DCAF8Q5TAQ9 597 aa9.92□□□□□ -0.82
RNU6-1261P-201ENST00000517194 TRIM41Q8WV44 630 aa9.92□□□□□ -0.82
RNU6-1261P-201ENST00000517194 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.92□□□□□ -0.82
RNU6-1261P-201ENST00000517194 MNX1P50219 401 aaPredicted RBP9.9□□□□□ -0.82
RNU6-1261P-201ENST00000517194 PAXIP1Q6ZW49 1069 aaPredicted RBP9.88□□□□□ -0.83
RNU6-1261P-201ENST00000517194 CHGAP10645 457 aaKnown RBP9.87□□□□□ -0.83
RNU6-1261P-201ENST00000517194 CFAP44Q96MT7 982 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms