RNA–Protein interactions for RNA: ENST00000517006.1

RNU6-410P-201, Transcript of RNA, U6 small nuclear 410, pseudogene, humanhuman

BASIC

Gene RNU6-410P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-410P-201ENST00000517006 AEBP2Q6ZN18 517 aaPredicted RBP18.11■□□□□ 0.49
RNU6-410P-201ENST00000517006 CHIC1Q5VXU3 224 aa17.7■□□□□ 0.42
RNU6-410P-201ENST00000517006 PHF23Q9BUL5 403 aaPredicted RBP15.6■□□□□ 0.09
RNU6-410P-201ENST00000517006 SENP3Q9H4L4 574 aaPredicted RBP15.3■□□□□ 0.04
RNU6-410P-201ENST00000517006 PLPPR3Q6T4P5 718 aa14.36□□□□□ -0.11
RNU6-410P-201ENST00000517006 FOXD1Q16676 465 aa14.22□□□□□ -0.13
RNU6-410P-201ENST00000517006 PPP6R1Q9UPN7 881 aa13.73□□□□□ -0.21
RNU6-410P-201ENST00000517006 ADRA2BP18089 450 aa13.71□□□□□ -0.21
RNU6-410P-201ENST00000517006 PIAS4Q8N2W9 510 aaPredicted RBP13.41□□□□□ -0.26
RNU6-410P-201ENST00000517006 MSH5O43196 834 aa13.06□□□□□ -0.32
RNU6-410P-201ENST00000517006 PPP4R3CPQ6ZMV5 832 aa12.67□□□□□ -0.38
RNU6-410P-201ENST00000517006 KCNA4P22459 653 aa12.46□□□□□ -0.41
RNU6-410P-201ENST00000517006 SCAF1Q9H7N4 1312 aaKnown RBP12.45□□□□□ -0.42
RNU6-410P-201ENST00000517006 MAPK8IP2Q13387 824 aaPredicted RBP12.42□□□□□ -0.42
RNU6-410P-201ENST00000517006 NCBP3Q53F19 620 aaKnown RBP12.3□□□□□ -0.44
RNU6-410P-201ENST00000517006 CNKSR2Q8WXI2 1034 aa12.29□□□□□ -0.44
RNU6-410P-201ENST00000517006 DMRT2Q9Y5R5 561 aa12.25□□□□□ -0.45
RNU6-410P-201ENST00000517006 NPM3O75607 178 aaKnown RBP12.2□□□□□ -0.46
RNU6-410P-201ENST00000517006 RNF216Q9NWF9 866 aaPredicted RBP12.05□□□□□ -0.48
RNU6-410P-201ENST00000517006 HOXD11P31277 338 aaPredicted RBP12.01□□□□□ -0.49
RNU6-410P-201ENST00000517006 DNAJC5BQ9UF47 199 aa11.86□□□□□ -0.51
RNU6-410P-201ENST00000517006 POTEDQ86YR6 584 aa11.84□□□□□ -0.51
RNU6-410P-201ENST00000517006 SLC4A1APQ9BWU0 796 aaKnown RBP11.84□□□□□ -0.51
RNU6-410P-201ENST00000517006 DCAF8L1A6NGE4 600 aa11.64□□□□□ -0.55
RNU6-410P-201ENST00000517006 EHMT2Q96KQ7 1210 aa11.56□□□□□ -0.56
RNU6-410P-201ENST00000517006 ZBTB22O15209 634 aa11.52□□□□□ -0.57
RNU6-410P-201ENST00000517006 SLC4A2P04920 1241 aa11.52□□□□□ -0.57
RNU6-410P-201ENST00000517006 FOXD4L1Q9NU39 408 aa11.44□□□□□ -0.58
RNU6-410P-201ENST00000517006 CSRNP3Q8WYN3 585 aa11.43□□□□□ -0.58
RNU6-410P-201ENST00000517006 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.39□□□□□ -0.59
RNU6-410P-201ENST00000517006 U3KPZ7 1027 aaPredicted RBP11.28□□□□□ -0.6
RNU6-410P-201ENST00000517006 MYCNP04198 464 aaPredicted RBP11.25□□□□□ -0.61
RNU6-410P-201ENST00000517006 RNF39Q9H2S5 420 aa11.23□□□□□ -0.61
RNU6-410P-201ENST00000517006 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.07□□□□□ -0.64
RNU6-410P-201ENST00000517006 HNRNPUL2Q1KMD3 747 aaKnown RBP11.07□□□□□ -0.64
RNU6-410P-201ENST00000517006 C1QBPQ07021 282 aaKnown RBP11.06□□□□□ -0.64
RNU6-410P-201ENST00000517006 SAMD1Q6SPF0 538 aaPredicted RBP11.06□□□□□ -0.64
RNU6-410P-201ENST00000517006 ATXN8OSP0DMR3 200 aa11.02□□□□□ -0.65
RNU6-410P-201ENST00000517006 ATF5Q9Y2D1 282 aaPredicted RBP10.98□□□□□ -0.65
RNU6-410P-201ENST00000517006 SPINK5Q9NQ38 1064 aaPredicted RBP10.94□□□□□ -0.66
RNU6-410P-201ENST00000517006 APLP2Q06481 763 aa10.93□□□□□ -0.66
RNU6-410P-201ENST00000517006 CAPN15O75808 1086 aa10.84□□□□□ -0.67
RNU6-410P-201ENST00000517006 CACNB1Q02641 598 aaPredicted RBP10.84□□□□□ -0.67
RNU6-410P-201ENST00000517006 ZNF219Q9P2Y4 722 aaPredicted RBP10.82□□□□□ -0.68
RNU6-410P-201ENST00000517006 TRHP20396 242 aaPredicted RBP10.8□□□□□ -0.68
RNU6-410P-201ENST00000517006 DSG3P32926 999 aa10.7□□□□□ -0.7
RNU6-410P-201ENST00000517006 ABCB7O75027 752 aa10.68□□□□□ -0.7
RNU6-410P-201ENST00000517006 POLA2Q14181 598 aa10.65□□□□□ -0.7
RNU6-410P-201ENST00000517006 MKRN4PQ13434 485 aaPredicted RBP10.52□□□□□ -0.73
RNU6-410P-201ENST00000517006 ZBTB12Q9Y330 459 aaPredicted RBP10.47□□□□□ -0.73
RNU6-410P-201ENST00000517006 FBLN2P98095 1184 aa10.43□□□□□ -0.74
RNU6-410P-201ENST00000517006 OSCARQ8IYS5 282 aa10.33□□□□□ -0.76
RNU6-410P-201ENST00000517006 FKBP8Q14318 412 aa10.31□□□□□ -0.76
RNU6-410P-201ENST00000517006 SPDYE4A6NLX3 237 aa10.24□□□□□ -0.77
RNU6-410P-201ENST00000517006 SPDYE2BA6NHP3 402 aa10.21□□□□□ -0.77
RNU6-410P-201ENST00000517006 SPDYE6P0CI01 402 aa10.21□□□□□ -0.77
RNU6-410P-201ENST00000517006 SPDYE2Q495Y8 402 aa10.21□□□□□ -0.77
RNU6-410P-201ENST00000517006 SSUH2Q9Y2M2 353 aa10.18□□□□□ -0.78
RNU6-410P-201ENST00000517006 PROM2Q8N271 834 aa10.15□□□□□ -0.78
RNU6-410P-201ENST00000517006 ZNF692Q9BU19 519 aaPredicted RBP10.15□□□□□ -0.78
RNU6-410P-201ENST00000517006 RBM42Q9BTD8 480 aaKnown RBP10.14□□□□□ -0.79
RNU6-410P-201ENST00000517006 AKT1S1Q96B36 256 aa10.05□□□□□ -0.8
RNU6-410P-201ENST00000517006 PABPN1Q86U42 306 aaKnown RBP eCLIP10.04□□□□□ -0.8
RNU6-410P-201ENST00000517006 REM2Q8IYK8 340 aaPredicted RBP9.96□□□□□ -0.82
RNU6-410P-201ENST00000517006 FBXO3Q9UK99 471 aa9.89□□□□□ -0.83
RNU6-410P-201ENST00000517006 SPDYE1Q8NFV5 336 aaPredicted RBP9.88□□□□□ -0.83
RNU6-410P-201ENST00000517006 PITPNM1O00562 1244 aa9.87□□□□□ -0.83
RNU6-410P-201ENST00000517006 STAG3Q9UJ98 1225 aa9.84□□□□□ -0.83
RNU6-410P-201ENST00000517006 CLEC11AQ9Y240 323 aa9.82□□□□□ -0.84
RNU6-410P-201ENST00000517006 VASPP50552 380 aaPredicted RBP9.81□□□□□ -0.84
RNU6-410P-201ENST00000517006 PRR29P0C7W0 189 aa9.73□□□□□ -0.85
RNU6-410P-201ENST00000517006 CHRDL2Q6WN34 429 aa9.73□□□□□ -0.85
RNU6-410P-201ENST00000517006 IFNLR1Q8IU57 520 aaPredicted RBP9.69□□□□□ -0.86
RNU6-410P-201ENST00000517006 CREBZFQ9NS37 354 aa9.69□□□□□ -0.86
RNU6-410P-201ENST00000517006 FXR2P51116 673 aaKnown RBP eCLIP9.66□□□□□ -0.86
RNU6-410P-201ENST00000517006 MIER1Q8N108 512 aa9.66□□□□□ -0.86
RNU6-410P-201ENST00000517006 PLCD3Q8N3E9 789 aa9.66□□□□□ -0.86
RNU6-410P-201ENST00000517006 PIP4P2Q8N4L2 257 aa9.64□□□□□ -0.87
RNU6-410P-201ENST00000517006 CHADLQ6NUI6 762 aa9.62□□□□□ -0.87
RNU6-410P-201ENST00000517006 MNX1P50219 401 aaPredicted RBP9.61□□□□□ -0.87
RNU6-410P-201ENST00000517006 PRKAR2AP13861 404 aaKnown RBP9.59□□□□□ -0.87
RNU6-410P-201ENST00000517006 PLEKHG5O94827 1062 aa9.58□□□□□ -0.88
RNU6-410P-201ENST00000517006 KLHL34Q8N239 644 aa9.55□□□□□ -0.88
RNU6-410P-201ENST00000517006 ZBTB47Q9UFB7 747 aaPredicted RBP9.55□□□□□ -0.88
RNU6-410P-201ENST00000517006 SPOCK2Q92563 424 aa9.52□□□□□ -0.89
RNU6-410P-201ENST00000517006 FARP1Q9Y4F1 1045 aaPredicted RBP9.52□□□□□ -0.89
RNU6-410P-201ENST00000517006 NUBP1P53384 320 aa9.49□□□□□ -0.89
RNU6-410P-201ENST00000517006 RTN4Q9NQC3 1192 aaKnown RBP9.48□□□□□ -0.89
RNU6-410P-201ENST00000517006 AMER1Q5JTC6 1135 aaPredicted RBP9.47□□□□□ -0.89
RNU6-410P-201ENST00000517006 NPM1P06748 294 aaKnown RBP eCLIP9.46□□□□□ -0.9
RNU6-410P-201ENST00000517006 RASEFQ8IZ41 740 aa9.44□□□□□ -0.9
RNU6-410P-201ENST00000517006 PKD2Q13563 968 aa9.39□□□□□ -0.91
RNU6-410P-201ENST00000517006 POTEHQ6S545 545 aa9.37□□□□□ -0.91
RNU6-410P-201ENST00000517006 FAM212AQ96EL1 285 aa9.37□□□□□ -0.91
RNU6-410P-201ENST00000517006 C19orf67A6NJJ6 358 aa9.34□□□□□ -0.91
RNU6-410P-201ENST00000517006 GSE1Q14687 1217 aa9.34□□□□□ -0.91
RNU6-410P-201ENST00000517006 CIZ1Q9ULV3 898 aaPredicted RBP9.34□□□□□ -0.91
RNU6-410P-201ENST00000517006 CD44P16070 742 aaKnown RBP9.33□□□□□ -0.92
RNU6-410P-201ENST00000517006 TSPYL2Q9H2G4 693 aaPredicted RBP9.33□□□□□ -0.92
RNU6-410P-201ENST00000517006 DCAF8Q5TAQ9 597 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms