RNA–Protein interactions for RNA: ENST00000516986.1

RNU6-56P-201, Transcript of RNA, U6 small nuclear 56, pseudogene, humanhuman

BASIC

Gene RNU6-56P, Length 93 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-56P-201ENST00000516986 SLC24A1O60721 1099 aa5.71□□□□□ -1.5
RNU6-56P-201ENST00000516986 MYT1Q01538 1121 aa5.49□□□□□ -1.53
RNU6-56P-201ENST00000516986 TTBK1Q5TCY1 1321 aaPredicted RBP5.45□□□□□ -1.54
RNU6-56P-201ENST00000516986 PELP1Q8IZL8 1130 aaKnown RBP5.31□□□□□ -1.56
RNU6-56P-201ENST00000516986 DAXXQ9UER7 740 aaPredicted RBP5.3□□□□□ -1.56
RNU6-56P-201ENST00000516986 ERICH6Q7L0X2 663 aa5.2□□□□□ -1.58
RNU6-56P-201ENST00000516986 CHIC1Q5VXU3 224 aa5.15□□□□□ -1.59
RNU6-56P-201ENST00000516986 EHMT2Q96KQ7 1210 aa5.15□□□□□ -1.59
RNU6-56P-201ENST00000516986 NCBP3Q53F19 620 aaKnown RBP5.13□□□□□ -1.59
RNU6-56P-201ENST00000516986 AMER1Q5JTC6 1135 aaPredicted RBP5.09□□□□□ -1.59
RNU6-56P-201ENST00000516986 APLP2Q06481 763 aa5.05□□□□□ -1.6
RNU6-56P-201ENST00000516986 RANGAP1P46060 587 aaPredicted RBP5.02□□□□□ -1.61
RNU6-56P-201ENST00000516986 ARXQ96QS3 562 aa5.02□□□□□ -1.61
RNU6-56P-201ENST00000516986 RTN4Q9NQC3 1192 aaKnown RBP5□□□□□ -1.61
RNU6-56P-201ENST00000516986 PRKCSHP14314 528 aaPredicted RBP4.92□□□□□ -1.62
RNU6-56P-201ENST00000516986 PLPPR3Q6T4P5 718 aa4.9□□□□□ -1.63
RNU6-56P-201ENST00000516986 HOMEZQ8IX15 550 aa4.86□□□□□ -1.63
RNU6-56P-201ENST00000516986 EIF5BO60841 1220 aaKnown RBP4.8□□□□□ -1.64
RNU6-56P-201ENST00000516986 BCANQ96GW7 911 aa4.79□□□□□ -1.64
RNU6-56P-201ENST00000516986 KCNA4P22459 653 aa4.75□□□□□ -1.65
RNU6-56P-201ENST00000516986 TIMELESSQ9UNS1 1208 aa4.75□□□□□ -1.65
RNU6-56P-201ENST00000516986 CSRNP3Q8WYN3 585 aa4.74□□□□□ -1.65
RNU6-56P-201ENST00000516986 TAOK2Q9UL54 1235 aa4.74□□□□□ -1.65
RNU6-56P-201ENST00000516986 TULP1O00294 542 aaPredicted RBP4.73□□□□□ -1.65
RNU6-56P-201ENST00000516986 DCAF8L2P0C7V8 631 aa4.67□□□□□ -1.66
RNU6-56P-201ENST00000516986 PODXL2Q9NZ53 605 aa4.67□□□□□ -1.66
RNU6-56P-201ENST00000516986 FBXO3Q9UK99 471 aa4.65□□□□□ -1.67
RNU6-56P-201ENST00000516986 GTF3C3Q9Y5Q9 886 aa4.65□□□□□ -1.67
RNU6-56P-201ENST00000516986 TPRNQ4KMQ1 711 aa4.64□□□□□ -1.67
RNU6-56P-201ENST00000516986 NPM2Q86SE8 214 aaKnown RBP4.62□□□□□ -1.67
RNU6-56P-201ENST00000516986 PLCB2Q00722 1185 aa4.6□□□□□ -1.67
RNU6-56P-201ENST00000516986 KLHL34Q8N239 644 aa4.59□□□□□ -1.67
RNU6-56P-201ENST00000516986 HAP1P54257 671 aaPredicted RBP4.58□□□□□ -1.68
RNU6-56P-201ENST00000516986 SLC4A1APQ9BWU0 796 aaKnown RBP4.58□□□□□ -1.68
RNU6-56P-201ENST00000516986 AEBP2Q6ZN18 517 aaPredicted RBP4.57□□□□□ -1.68
RNU6-56P-201ENST00000516986 C14orf37Q86TY3 774 aa4.55□□□□□ -1.68
RNU6-56P-201ENST00000516986 PHF23Q9BUL5 403 aaPredicted RBP4.53□□□□□ -1.68
RNU6-56P-201ENST00000516986 HMGB1P09429 215 aaKnown RBP4.52□□□□□ -1.69
RNU6-56P-201ENST00000516986 VSIG10Q8N0Z9 540 aa4.52□□□□□ -1.69
RNU6-56P-201ENST00000516986 TMEM132AQ24JP5 1023 aa4.51□□□□□ -1.69
RNU6-56P-201ENST00000516986 BCL11AQ9H165 835 aa4.51□□□□□ -1.69
RNU6-56P-201ENST00000516986 CDK11AQ9UQ88 783 aaPredicted RBP4.51□□□□□ -1.69
RNU6-56P-201ENST00000516986 NEFLP07196 543 aa4.44□□□□□ -1.7
RNU6-56P-201ENST00000516986 CDK11BP21127 795 aaKnown RBP4.44□□□□□ -1.7
RNU6-56P-201ENST00000516986 PDIA4P13667 645 aaKnown RBP4.43□□□□□ -1.7
RNU6-56P-201ENST00000516986 SHROOM4Q9ULL8 1493 aa4.4□□□□□ -1.71
RNU6-56P-201ENST00000516986 PLEKHG5O94827 1062 aa4.39□□□□□ -1.71
RNU6-56P-201ENST00000516986 UBE2Q2Q8WVN8 375 aa4.39□□□□□ -1.71
RNU6-56P-201ENST00000516986 HSP90B1P14625 803 aaKnown RBP4.38□□□□□ -1.71
RNU6-56P-201ENST00000516986 TRIM26Q12899 539 aaPredicted RBP4.38□□□□□ -1.71
RNU6-56P-201ENST00000516986 BRD2P25440 801 aaKnown RBP4.37□□□□□ -1.71
RNU6-56P-201ENST00000516986 TAF7LQ5H9L4 462 aa4.37□□□□□ -1.71
RNU6-56P-201ENST00000516986 SUPT5HO00267 1087 aaKnown RBP4.35□□□□□ -1.71
RNU6-56P-201ENST00000516986 ZNF326Q5BKZ1 582 aaKnown RBP4.35□□□□□ -1.71
RNU6-56P-201ENST00000516986 CNKSR2Q8WXI2 1034 aa4.35□□□□□ -1.71
RNU6-56P-201ENST00000516986 CCDC9Q9Y3X0 531 aaKnown RBP4.35□□□□□ -1.71
RNU6-56P-201ENST00000516986 CENPBP07199 599 aaPredicted RBP4.33□□□□□ -1.72
RNU6-56P-201ENST00000516986 PDE4CQ08493 712 aa4.33□□□□□ -1.72
RNU6-56P-201ENST00000516986 NBR1Q14596 966 aa4.32□□□□□ -1.72
RNU6-56P-201ENST00000516986 FKBP8Q14318 412 aa4.31□□□□□ -1.72
RNU6-56P-201ENST00000516986 FAM9AQ8IZU1 332 aaPredicted RBP4.31□□□□□ -1.72
RNU6-56P-201ENST00000516986 CHMP4AQ9BY43 222 aa4.3□□□□□ -1.72
RNU6-56P-201ENST00000516986 LOC105371045A0A1W2PR82 267 aa4.29□□□□□ -1.72
RNU6-56P-201ENST00000516986 ZBTB7CA1YPR0 619 aa4.29□□□□□ -1.72
RNU6-56P-201ENST00000516986 UBTFP17480 764 aaKnown RBP4.29□□□□□ -1.72
RNU6-56P-201ENST00000516986 HRCP23327 699 aa4.28□□□□□ -1.72
RNU6-56P-201ENST00000516986 PKNOX2Q96KN3 472 aa4.28□□□□□ -1.72
RNU6-56P-201ENST00000516986 BCCIPQ9P287 314 aaKnown RBP eCLIP4.28□□□□□ -1.72
RNU6-56P-201ENST00000516986 PUS7Q96PZ0 661 aaKnown RBP4.27□□□□□ -1.73
RNU6-56P-201ENST00000516986 ZBTB4Q9P1Z0 1013 aaPredicted RBP4.27□□□□□ -1.73
RNU6-56P-201ENST00000516986 ARID3AQ99856 593 aa4.26□□□□□ -1.73
RNU6-56P-201ENST00000516986 POLR3GLQ9BT43 218 aa4.26□□□□□ -1.73
RNU6-56P-201ENST00000516986 KDM2AQ9Y2K7 1162 aa4.26□□□□□ -1.73
RNU6-56P-201ENST00000516986 SAMD1Q6SPF0 538 aaPredicted RBP4.23□□□□□ -1.73
RNU6-56P-201ENST00000516986 FBLN2P98095 1184 aa4.2□□□□□ -1.74
RNU6-56P-201ENST00000516986 ZBTB22O15209 634 aa4.19□□□□□ -1.74
RNU6-56P-201ENST00000516986 CLSTN1O94985 981 aa4.19□□□□□ -1.74
RNU6-56P-201ENST00000516986 FGD1P98174 961 aa4.18□□□□□ -1.74
RNU6-56P-201ENST00000516986 GLIPR1L2Q4G1C9 344 aa4.18□□□□□ -1.74
RNU6-56P-201ENST00000516986 CLSPNQ9HAW4 1339 aa4.18□□□□□ -1.74
RNU6-56P-201ENST00000516986 RSPH4AQ5TD94 716 aa4.17□□□□□ -1.74
RNU6-56P-201ENST00000516986 DHX37Q8IY37 1157 aaKnown RBP4.17□□□□□ -1.74
RNU6-56P-201ENST00000516986 BBXQ8WY36 941 aaPredicted RBP4.17□□□□□ -1.74
RNU6-56P-201ENST00000516986 NPM1P06748 294 aaKnown RBP eCLIP4.16□□□□□ -1.74
RNU6-56P-201ENST00000516986 ZEB1P37275 1124 aaPredicted RBP4.16□□□□□ -1.74
RNU6-56P-201ENST00000516986 ERICH6BQ5W0A0 696 aa4.16□□□□□ -1.74
RNU6-56P-201ENST00000516986 PAXIP1Q6ZW49 1069 aaPredicted RBP4.16□□□□□ -1.74
RNU6-56P-201ENST00000516986 CFAP44Q96MT7 982 aa4.16□□□□□ -1.74
RNU6-56P-201ENST00000516986 IGSF3O75054 1194 aa4.15□□□□□ -1.75
RNU6-56P-201ENST00000516986 NAP1L5Q96NT1 182 aaPredicted RBP4.15□□□□□ -1.75
RNU6-56P-201ENST00000516986 PSMD1Q99460 953 aa4.15□□□□□ -1.75
RNU6-56P-201ENST00000516986 MYT1LQ9UL68 1186 aa4.14□□□□□ -1.75
RNU6-56P-201ENST00000516986 TICAM2Q86XR7 235 aa4.13□□□□□ -1.75
RNU6-56P-201ENST00000516986 BCL11BQ9C0K0 894 aaPredicted RBP4.13□□□□□ -1.75
RNU6-56P-201ENST00000516986 RSPH6AQ9H0K4 717 aa4.13□□□□□ -1.75
RNU6-56P-201ENST00000516986 FOXD4L1Q9NU39 408 aa4.13□□□□□ -1.75
RNU6-56P-201ENST00000516986 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.13□□□□□ -1.75
RNU6-56P-201ENST00000516986 PTMSP20962 102 aa4.12□□□□□ -1.75
RNU6-56P-201ENST00000516986 YTHDC1Q96MU7 727 aaKnown RBP4.12□□□□□ -1.75
RNU6-56P-201ENST00000516986 ANP32EQ9BTT0 268 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms