RNA–Protein interactions for RNA: ENST00000516973.1

RNU6-341P-201, Transcript of RNA, U6 small nuclear 341, pseudogene, humanhuman

BASIC

Gene RNU6-341P, Length 96 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-341P-201ENST00000516973 AEBP2Q6ZN18 517 aaPredicted RBP9.8□□□□□ -0.84
RNU6-341P-201ENST00000516973 CHIC1Q5VXU3 224 aa9.52□□□□□ -0.89
RNU6-341P-201ENST00000516973 PHF23Q9BUL5 403 aaPredicted RBP8.42□□□□□ -1.06
RNU6-341P-201ENST00000516973 SENP3Q9H4L4 574 aaPredicted RBP8.24□□□□□ -1.09
RNU6-341P-201ENST00000516973 FOXD1Q16676 465 aa7.7□□□□□ -1.18
RNU6-341P-201ENST00000516973 PLPPR3Q6T4P5 718 aa7.7□□□□□ -1.18
RNU6-341P-201ENST00000516973 PPP6R1Q9UPN7 881 aa7.44□□□□□ -1.22
RNU6-341P-201ENST00000516973 ADRA2BP18089 450 aa7.43□□□□□ -1.22
RNU6-341P-201ENST00000516973 PIAS4Q8N2W9 510 aaPredicted RBP7.25□□□□□ -1.25
RNU6-341P-201ENST00000516973 MSH5O43196 834 aa7.05□□□□□ -1.28
RNU6-341P-201ENST00000516973 PPP4R3CPQ6ZMV5 832 aa6.82□□□□□ -1.32
RNU6-341P-201ENST00000516973 MAPK8IP2Q13387 824 aaPredicted RBP6.76□□□□□ -1.33
RNU6-341P-201ENST00000516973 SCAF1Q9H7N4 1312 aaKnown RBP6.7□□□□□ -1.34
RNU6-341P-201ENST00000516973 KCNA4P22459 653 aa6.68□□□□□ -1.34
RNU6-341P-201ENST00000516973 CNKSR2Q8WXI2 1034 aa6.6□□□□□ -1.35
RNU6-341P-201ENST00000516973 DMRT2Q9Y5R5 561 aa6.6□□□□□ -1.35
RNU6-341P-201ENST00000516973 NCBP3Q53F19 620 aaKnown RBP6.59□□□□□ -1.35
RNU6-341P-201ENST00000516973 NPM3O75607 178 aaKnown RBP6.55□□□□□ -1.36
RNU6-341P-201ENST00000516973 POTEDQ86YR6 584 aa6.48□□□□□ -1.37
RNU6-341P-201ENST00000516973 RNF216Q9NWF9 866 aaPredicted RBP6.47□□□□□ -1.37
RNU6-341P-201ENST00000516973 HOXD11P31277 338 aaPredicted RBP6.45□□□□□ -1.38
RNU6-341P-201ENST00000516973 DCAF8L1A6NGE4 600 aa6.34□□□□□ -1.39
RNU6-341P-201ENST00000516973 SLC4A1APQ9BWU0 796 aaKnown RBP6.33□□□□□ -1.4
RNU6-341P-201ENST00000516973 DNAJC5BQ9UF47 199 aa6.28□□□□□ -1.4
RNU6-341P-201ENST00000516973 SLC4A2P04920 1241 aa6.2□□□□□ -1.42
RNU6-341P-201ENST00000516973 EHMT2Q96KQ7 1210 aa6.18□□□□□ -1.42
RNU6-341P-201ENST00000516973 ZBTB22O15209 634 aa6.17□□□□□ -1.42
RNU6-341P-201ENST00000516973 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.16□□□□□ -1.42
RNU6-341P-201ENST00000516973 FOXD4L1Q9NU39 408 aa6.11□□□□□ -1.43
RNU6-341P-201ENST00000516973 CSRNP3Q8WYN3 585 aa6.1□□□□□ -1.43
RNU6-341P-201ENST00000516973 RNF39Q9H2S5 420 aa6.07□□□□□ -1.44
RNU6-341P-201ENST00000516973 U3KPZ7 1027 aaPredicted RBP6.07□□□□□ -1.44
RNU6-341P-201ENST00000516973 MYCNP04198 464 aaPredicted RBP6.02□□□□□ -1.45
RNU6-341P-201ENST00000516973 C1QBPQ07021 282 aaKnown RBP5.96□□□□□ -1.46
RNU6-341P-201ENST00000516973 SPINK5Q9NQ38 1064 aaPredicted RBP5.93□□□□□ -1.46
RNU6-341P-201ENST00000516973 ATF5Q9Y2D1 282 aaPredicted RBP5.93□□□□□ -1.46
RNU6-341P-201ENST00000516973 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.92□□□□□ -1.46
RNU6-341P-201ENST00000516973 CACNB1Q02641 598 aaPredicted RBP5.92□□□□□ -1.46
RNU6-341P-201ENST00000516973 HNRNPUL2Q1KMD3 747 aaKnown RBP5.92□□□□□ -1.46
RNU6-341P-201ENST00000516973 SAMD1Q6SPF0 538 aaPredicted RBP5.92□□□□□ -1.46
RNU6-341P-201ENST00000516973 CAPN15O75808 1086 aa5.88□□□□□ -1.47
RNU6-341P-201ENST00000516973 TRHP20396 242 aaPredicted RBP5.87□□□□□ -1.47
RNU6-341P-201ENST00000516973 ATXN8OSP0DMR3 200 aa5.86□□□□□ -1.47
RNU6-341P-201ENST00000516973 APLP2Q06481 763 aa5.85□□□□□ -1.47
RNU6-341P-201ENST00000516973 ABCB7O75027 752 aa5.8□□□□□ -1.48
RNU6-341P-201ENST00000516973 ZNF219Q9P2Y4 722 aaPredicted RBP5.8□□□□□ -1.48
RNU6-341P-201ENST00000516973 DSG3P32926 999 aa5.78□□□□□ -1.48
RNU6-341P-201ENST00000516973 POLA2Q14181 598 aa5.76□□□□□ -1.49
RNU6-341P-201ENST00000516973 MKRN4PQ13434 485 aaPredicted RBP5.65□□□□□ -1.5
RNU6-341P-201ENST00000516973 FBLN2P98095 1184 aa5.6□□□□□ -1.51
RNU6-341P-201ENST00000516973 ZBTB12Q9Y330 459 aaPredicted RBP5.59□□□□□ -1.51
RNU6-341P-201ENST00000516973 OSCARQ8IYS5 282 aa5.57□□□□□ -1.52
RNU6-341P-201ENST00000516973 FKBP8Q14318 412 aa5.51□□□□□ -1.53
RNU6-341P-201ENST00000516973 SPDYE4A6NLX3 237 aa5.49□□□□□ -1.53
RNU6-341P-201ENST00000516973 ZNF692Q9BU19 519 aaPredicted RBP5.48□□□□□ -1.53
RNU6-341P-201ENST00000516973 SPDYE2BA6NHP3 402 aa5.47□□□□□ -1.53
RNU6-341P-201ENST00000516973 SPDYE6P0CI01 402 aa5.47□□□□□ -1.53
RNU6-341P-201ENST00000516973 SPDYE2Q495Y8 402 aa5.47□□□□□ -1.53
RNU6-341P-201ENST00000516973 RBM42Q9BTD8 480 aaKnown RBP5.45□□□□□ -1.54
RNU6-341P-201ENST00000516973 SSUH2Q9Y2M2 353 aa5.45□□□□□ -1.54
RNU6-341P-201ENST00000516973 PABPN1Q86U42 306 aaKnown RBP eCLIP5.42□□□□□ -1.54
RNU6-341P-201ENST00000516973 AKT1S1Q96B36 256 aa5.41□□□□□ -1.54
RNU6-341P-201ENST00000516973 REM2Q8IYK8 340 aaPredicted RBP5.39□□□□□ -1.55
RNU6-341P-201ENST00000516973 PROM2Q8N271 834 aa5.39□□□□□ -1.55
RNU6-341P-201ENST00000516973 PITPNM1O00562 1244 aa5.34□□□□□ -1.55
RNU6-341P-201ENST00000516973 CLEC11AQ9Y240 323 aa5.33□□□□□ -1.56
RNU6-341P-201ENST00000516973 SPDYE1Q8NFV5 336 aaPredicted RBP5.31□□□□□ -1.56
RNU6-341P-201ENST00000516973 CHRDL2Q6WN34 429 aa5.27□□□□□ -1.57
RNU6-341P-201ENST00000516973 STAG3Q9UJ98 1225 aa5.27□□□□□ -1.57
RNU6-341P-201ENST00000516973 PRR29P0C7W0 189 aa5.26□□□□□ -1.57
RNU6-341P-201ENST00000516973 FBXO3Q9UK99 471 aa5.25□□□□□ -1.57
RNU6-341P-201ENST00000516973 CHADLQ6NUI6 762 aa5.23□□□□□ -1.57
RNU6-341P-201ENST00000516973 VASPP50552 380 aaPredicted RBP5.22□□□□□ -1.57
RNU6-341P-201ENST00000516973 MIER1Q8N108 512 aa5.22□□□□□ -1.57
RNU6-341P-201ENST00000516973 PIP4P2Q8N4L2 257 aa5.22□□□□□ -1.57
RNU6-341P-201ENST00000516973 CREBZFQ9NS37 354 aa5.22□□□□□ -1.57
RNU6-341P-201ENST00000516973 FXR2P51116 673 aaKnown RBP eCLIP5.21□□□□□ -1.58
RNU6-341P-201ENST00000516973 PRKAR2AP13861 404 aaKnown RBP5.2□□□□□ -1.58
RNU6-341P-201ENST00000516973 PLCD3Q8N3E9 789 aa5.19□□□□□ -1.58
RNU6-341P-201ENST00000516973 IFNLR1Q8IU57 520 aaPredicted RBP5.18□□□□□ -1.58
RNU6-341P-201ENST00000516973 MNX1P50219 401 aaPredicted RBP5.16□□□□□ -1.58
RNU6-341P-201ENST00000516973 KLHL34Q8N239 644 aa5.14□□□□□ -1.59
RNU6-341P-201ENST00000516973 FARP1Q9Y4F1 1045 aaPredicted RBP5.14□□□□□ -1.59
RNU6-341P-201ENST00000516973 PLEKHG5O94827 1062 aa5.13□□□□□ -1.59
RNU6-341P-201ENST00000516973 POTEHQ6S545 545 aa5.12□□□□□ -1.59
RNU6-341P-201ENST00000516973 NUBP1P53384 320 aa5.09□□□□□ -1.59
RNU6-341P-201ENST00000516973 SPOCK2Q92563 424 aa5.09□□□□□ -1.59
RNU6-341P-201ENST00000516973 NPM1P06748 294 aaKnown RBP eCLIP5.08□□□□□ -1.6
RNU6-341P-201ENST00000516973 RASEFQ8IZ41 740 aa5.08□□□□□ -1.6
RNU6-341P-201ENST00000516973 ZBTB47Q9UFB7 747 aaPredicted RBP5.08□□□□□ -1.6
RNU6-341P-201ENST00000516973 TSPYL2Q9H2G4 693 aaPredicted RBP5.06□□□□□ -1.6
RNU6-341P-201ENST00000516973 C19orf67A6NJJ6 358 aa5.05□□□□□ -1.6
RNU6-341P-201ENST00000516973 EVX2Q03828 476 aa5.05□□□□□ -1.6
RNU6-341P-201ENST00000516973 HAX1O00165 279 aa5.04□□□□□ -1.6
RNU6-341P-201ENST00000516973 CD44P16070 742 aaKnown RBP5.04□□□□□ -1.6
RNU6-341P-201ENST00000516973 DCAF8Q5TAQ9 597 aa5.04□□□□□ -1.6
RNU6-341P-201ENST00000516973 CIZ1Q9ULV3 898 aaPredicted RBP5.03□□□□□ -1.6
RNU6-341P-201ENST00000516973 RTN4Q9NQC3 1192 aaKnown RBP5.02□□□□□ -1.61
RNU6-341P-201ENST00000516973 FAM212AQ96EL1 285 aa5.01□□□□□ -1.61
RNU6-341P-201ENST00000516973 ZRANB1Q9UGI0 708 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms