RNA–Protein interactions for RNA: ENST00000516883.1

SNORD60.2-201, Transcript of small nucleolar RNA, C/D box 60, humanhuman

BASIC

Gene SNORD60, Length 86 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD60.2-201ENST00000516883 AEBP2Q6ZN18 517 aaPredicted RBP19.8■□□□□ 0.76
SNORD60.2-201ENST00000516883 CHIC1Q5VXU3 224 aa19.09■□□□□ 0.65
SNORD60.2-201ENST00000516883 PHF23Q9BUL5 403 aaPredicted RBP16.84■□□□□ 0.29
SNORD60.2-201ENST00000516883 SENP3Q9H4L4 574 aaPredicted RBP16.7■□□□□ 0.26
SNORD60.2-201ENST00000516883 FOXD1Q16676 465 aa15.61■□□□□ 0.09
SNORD60.2-201ENST00000516883 PLPPR3Q6T4P5 718 aa15.37■□□□□ 0.05
SNORD60.2-201ENST00000516883 PPP6R1Q9UPN7 881 aa14.93□□□□□ -0.02
SNORD60.2-201ENST00000516883 ADRA2BP18089 450 aa14.87□□□□□ -0.03
SNORD60.2-201ENST00000516883 PIAS4Q8N2W9 510 aaPredicted RBP14.63□□□□□ -0.07
SNORD60.2-201ENST00000516883 MSH5O43196 834 aa14.36□□□□□ -0.11
SNORD60.2-201ENST00000516883 MAPK8IP2Q13387 824 aaPredicted RBP13.58□□□□□ -0.24
SNORD60.2-201ENST00000516883 PPP4R3CPQ6ZMV5 832 aa13.57□□□□□ -0.24
SNORD60.2-201ENST00000516883 POTEDQ86YR6 584 aa13.48□□□□□ -0.25
SNORD60.2-201ENST00000516883 SCAF1Q9H7N4 1312 aaKnown RBP13.46□□□□□ -0.25
SNORD60.2-201ENST00000516883 DMRT2Q9Y5R5 561 aa13.33□□□□□ -0.28
SNORD60.2-201ENST00000516883 CNKSR2Q8WXI2 1034 aa13.19□□□□□ -0.3
SNORD60.2-201ENST00000516883 KCNA4P22459 653 aa13.08□□□□□ -0.32
SNORD60.2-201ENST00000516883 NCBP3Q53F19 620 aaKnown RBP13.06□□□□□ -0.32
SNORD60.2-201ENST00000516883 HOXD11P31277 338 aaPredicted RBP13□□□□□ -0.33
SNORD60.2-201ENST00000516883 NPM3O75607 178 aaKnown RBP12.99□□□□□ -0.33
SNORD60.2-201ENST00000516883 RNF216Q9NWF9 866 aaPredicted RBP12.98□□□□□ -0.33
SNORD60.2-201ENST00000516883 DCAF8L1A6NGE4 600 aa12.75□□□□□ -0.37
SNORD60.2-201ENST00000516883 DNAJC5BQ9UF47 199 aa12.57□□□□□ -0.4
SNORD60.2-201ENST00000516883 SLC4A1APQ9BWU0 796 aaKnown RBP12.37□□□□□ -0.43
SNORD60.2-201ENST00000516883 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.35□□□□□ -0.43
SNORD60.2-201ENST00000516883 RNF39Q9H2S5 420 aa12.35□□□□□ -0.43
SNORD60.2-201ENST00000516883 SLC4A2P04920 1241 aa12.34□□□□□ -0.43
SNORD60.2-201ENST00000516883 U3KPZ7 1027 aaPredicted RBP12.19□□□□□ -0.46
SNORD60.2-201ENST00000516883 C1QBPQ07021 282 aaKnown RBP12.14□□□□□ -0.47
SNORD60.2-201ENST00000516883 CACNB1Q02641 598 aaPredicted RBP12.13□□□□□ -0.47
SNORD60.2-201ENST00000516883 ZBTB22O15209 634 aa12.09□□□□□ -0.47
SNORD60.2-201ENST00000516883 FOXD4L1Q9NU39 408 aa12.03□□□□□ -0.48
SNORD60.2-201ENST00000516883 MYCNP04198 464 aaPredicted RBP11.94□□□□□ -0.5
SNORD60.2-201ENST00000516883 SPINK5Q9NQ38 1064 aaPredicted RBP11.93□□□□□ -0.5
SNORD60.2-201ENST00000516883 EHMT2Q96KQ7 1210 aa11.86□□□□□ -0.51
SNORD60.2-201ENST00000516883 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.84□□□□□ -0.51
SNORD60.2-201ENST00000516883 HNRNPUL2Q1KMD3 747 aaKnown RBP11.84□□□□□ -0.51
SNORD60.2-201ENST00000516883 CSRNP3Q8WYN3 585 aa11.83□□□□□ -0.52
SNORD60.2-201ENST00000516883 CAPN15O75808 1086 aa11.82□□□□□ -0.52
SNORD60.2-201ENST00000516883 SAMD1Q6SPF0 538 aaPredicted RBP11.82□□□□□ -0.52
SNORD60.2-201ENST00000516883 ATF5Q9Y2D1 282 aaPredicted RBP11.76□□□□□ -0.53
SNORD60.2-201ENST00000516883 TRHP20396 242 aaPredicted RBP11.74□□□□□ -0.53
SNORD60.2-201ENST00000516883 APLP2Q06481 763 aa11.72□□□□□ -0.53
SNORD60.2-201ENST00000516883 DSG3P32926 999 aa11.7□□□□□ -0.54
SNORD60.2-201ENST00000516883 ZNF219Q9P2Y4 722 aaPredicted RBP11.67□□□□□ -0.54
SNORD60.2-201ENST00000516883 ABCB7O75027 752 aa11.63□□□□□ -0.55
SNORD60.2-201ENST00000516883 ATXN8OSP0DMR3 200 aa11.58□□□□□ -0.56
SNORD60.2-201ENST00000516883 POLA2Q14181 598 aa11.52□□□□□ -0.57
SNORD60.2-201ENST00000516883 MKRN4PQ13434 485 aaPredicted RBP11.21□□□□□ -0.61
SNORD60.2-201ENST00000516883 ZBTB12Q9Y330 459 aaPredicted RBP11.2□□□□□ -0.62
SNORD60.2-201ENST00000516883 OSCARQ8IYS5 282 aa11.15□□□□□ -0.62
SNORD60.2-201ENST00000516883 FBLN2P98095 1184 aa11.11□□□□□ -0.63
SNORD60.2-201ENST00000516883 RBM42Q9BTD8 480 aaKnown RBP11.05□□□□□ -0.64
SNORD60.2-201ENST00000516883 SPDYE2BA6NHP3 402 aa10.94□□□□□ -0.66
SNORD60.2-201ENST00000516883 SPDYE6P0CI01 402 aa10.94□□□□□ -0.66
SNORD60.2-201ENST00000516883 SPDYE2Q495Y8 402 aa10.94□□□□□ -0.66
SNORD60.2-201ENST00000516883 AKT1S1Q96B36 256 aa10.92□□□□□ -0.66
SNORD60.2-201ENST00000516883 ZNF692Q9BU19 519 aaPredicted RBP10.89□□□□□ -0.67
SNORD60.2-201ENST00000516883 SSUH2Q9Y2M2 353 aa10.88□□□□□ -0.67
SNORD60.2-201ENST00000516883 REM2Q8IYK8 340 aaPredicted RBP10.86□□□□□ -0.67
SNORD60.2-201ENST00000516883 SPDYE4A6NLX3 237 aa10.8□□□□□ -0.68
SNORD60.2-201ENST00000516883 PABPN1Q86U42 306 aaKnown RBP eCLIP10.76□□□□□ -0.69
SNORD60.2-201ENST00000516883 PITPNM1O00562 1244 aa10.75□□□□□ -0.69
SNORD60.2-201ENST00000516883 CHRDL2Q6WN34 429 aa10.73□□□□□ -0.69
SNORD60.2-201ENST00000516883 FKBP8Q14318 412 aa10.66□□□□□ -0.7
SNORD60.2-201ENST00000516883 CLEC11AQ9Y240 323 aa10.66□□□□□ -0.7
SNORD60.2-201ENST00000516883 SPDYE1Q8NFV5 336 aaPredicted RBP10.65□□□□□ -0.7
SNORD60.2-201ENST00000516883 PROM2Q8N271 834 aa10.63□□□□□ -0.71
SNORD60.2-201ENST00000516883 POTEHQ6S545 545 aa10.61□□□□□ -0.71
SNORD60.2-201ENST00000516883 PIP4P2Q8N4L2 257 aa10.59□□□□□ -0.71
SNORD60.2-201ENST00000516883 FXR2P51116 673 aaKnown RBP eCLIP10.57□□□□□ -0.72
SNORD60.2-201ENST00000516883 PRR29P0C7W0 189 aa10.51□□□□□ -0.73
SNORD60.2-201ENST00000516883 CHADLQ6NUI6 762 aa10.47□□□□□ -0.73
SNORD60.2-201ENST00000516883 PRKAR2AP13861 404 aaKnown RBP10.46□□□□□ -0.73
SNORD60.2-201ENST00000516883 STAG3Q9UJ98 1225 aa10.46□□□□□ -0.73
SNORD60.2-201ENST00000516883 CREBZFQ9NS37 354 aa10.39□□□□□ -0.75
SNORD60.2-201ENST00000516883 FARP1Q9Y4F1 1045 aaPredicted RBP10.3□□□□□ -0.76
SNORD60.2-201ENST00000516883 MNX1P50219 401 aaPredicted RBP10.29□□□□□ -0.76
SNORD60.2-201ENST00000516883 EVX2Q03828 476 aa10.27□□□□□ -0.77
SNORD60.2-201ENST00000516883 HAX1O00165 279 aa10.26□□□□□ -0.77
SNORD60.2-201ENST00000516883 MIER1Q8N108 512 aa10.25□□□□□ -0.77
SNORD60.2-201ENST00000516883 FBXO3Q9UK99 471 aa10.24□□□□□ -0.77
SNORD60.2-201ENST00000516883 C19orf67A6NJJ6 358 aa10.22□□□□□ -0.77
SNORD60.2-201ENST00000516883 PLCD3Q8N3E9 789 aa10.2□□□□□ -0.78
SNORD60.2-201ENST00000516883 VASPP50552 380 aaPredicted RBP10.18□□□□□ -0.78
SNORD60.2-201ENST00000516883 CD44P16070 742 aaKnown RBP10.14□□□□□ -0.79
SNORD60.2-201ENST00000516883 PLEKHG5O94827 1062 aa10.11□□□□□ -0.79
SNORD60.2-201ENST00000516883 NPM1P06748 294 aaKnown RBP eCLIP10.11□□□□□ -0.79
SNORD60.2-201ENST00000516883 SP7Q8TDD2 431 aaPredicted RBP10.11□□□□□ -0.79
SNORD60.2-201ENST00000516883 IFNLR1Q8IU57 520 aaPredicted RBP10.08□□□□□ -0.8
SNORD60.2-201ENST00000516883 RASEFQ8IZ41 740 aa10.06□□□□□ -0.8
SNORD60.2-201ENST00000516883 ZRANB1Q9UGI0 708 aa10.06□□□□□ -0.8
SNORD60.2-201ENST00000516883 NUBP1P53384 320 aa10.05□□□□□ -0.8
SNORD60.2-201ENST00000516883 ZBTB47Q9UFB7 747 aaPredicted RBP10.03□□□□□ -0.8
SNORD60.2-201ENST00000516883 TSPYL2Q9H2G4 693 aaPredicted RBP10.02□□□□□ -0.81
SNORD60.2-201ENST00000516883 KLHL34Q8N239 644 aa10.01□□□□□ -0.81
SNORD60.2-201ENST00000516883 GABBR2O75899 941 aa9.99□□□□□ -0.81
SNORD60.2-201ENST00000516883 ZNF579Q8NAF0 562 aaKnown RBP9.99□□□□□ -0.81
SNORD60.2-201ENST00000516883 PHF12Q96QT6 1004 aa9.98□□□□□ -0.81
SNORD60.2-201ENST00000516883 PAK3O75914 559 aaPredicted RBP9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms