RNA–Protein interactions for RNA: ENST00000516881.1

SCARNA15-202, small Cajal body-specific RNA 15, humanhuman

BASIC

Gene SCARNA15, Length 127 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA15-202ENST00000516881 AEBP2Q6ZN18 517 aaPredicted RBP11.61□□□□□ -0.55
SCARNA15-202ENST00000516881 CHIC1Q5VXU3 224 aa10.9□□□□□ -0.66
SCARNA15-202ENST00000516881 SENP3Q9H4L4 574 aaPredicted RBP9.94□□□□□ -0.82
SCARNA15-202ENST00000516881 PHF23Q9BUL5 403 aaPredicted RBP9.81□□□□□ -0.84
SCARNA15-202ENST00000516881 FOXD1Q16676 465 aa9.28□□□□□ -0.92
SCARNA15-202ENST00000516881 MSH5O43196 834 aa8.73□□□□□ -1.01
SCARNA15-202ENST00000516881 POTEDQ86YR6 584 aa8.73□□□□□ -1.01
SCARNA15-202ENST00000516881 PIAS4Q8N2W9 510 aaPredicted RBP8.7□□□□□ -1.02
SCARNA15-202ENST00000516881 PLPPR3Q6T4P5 718 aa8.69□□□□□ -1.02
SCARNA15-202ENST00000516881 ADRA2BP18089 450 aa8.59□□□□□ -1.03
SCARNA15-202ENST00000516881 PPP6R1Q9UPN7 881 aa8.59□□□□□ -1.03
SCARNA15-202ENST00000516881 MAPK8IP2Q13387 824 aaPredicted RBP7.93□□□□□ -1.14
SCARNA15-202ENST00000516881 SCAF1Q9H7N4 1312 aaKnown RBP7.85□□□□□ -1.15
SCARNA15-202ENST00000516881 DMRT2Q9Y5R5 561 aa7.85□□□□□ -1.15
SCARNA15-202ENST00000516881 DCAF8L1A6NGE4 600 aa7.68□□□□□ -1.18
SCARNA15-202ENST00000516881 CACNB1Q02641 598 aaPredicted RBP7.63□□□□□ -1.19
SCARNA15-202ENST00000516881 PPP4R3CPQ6ZMV5 832 aa7.61□□□□□ -1.19
SCARNA15-202ENST00000516881 HOXD11P31277 338 aaPredicted RBP7.48□□□□□ -1.21
SCARNA15-202ENST00000516881 CNKSR2Q8WXI2 1034 aa7.48□□□□□ -1.21
SCARNA15-202ENST00000516881 RNF39Q9H2S5 420 aa7.42□□□□□ -1.22
SCARNA15-202ENST00000516881 RNF216Q9NWF9 866 aaPredicted RBP7.42□□□□□ -1.22
SCARNA15-202ENST00000516881 C1QBPQ07021 282 aaKnown RBP7.31□□□□□ -1.24
SCARNA15-202ENST00000516881 NCBP3Q53F19 620 aaKnown RBP7.3□□□□□ -1.24
SCARNA15-202ENST00000516881 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.25□□□□□ -1.25
SCARNA15-202ENST00000516881 DNAJC5BQ9UF47 199 aa7.18□□□□□ -1.26
SCARNA15-202ENST00000516881 NPM3O75607 178 aaKnown RBP7.17□□□□□ -1.26
SCARNA15-202ENST00000516881 CAPN15O75808 1086 aa7.03□□□□□ -1.28
SCARNA15-202ENST00000516881 U3KPZ7 1027 aaPredicted RBP7.01□□□□□ -1.29
SCARNA15-202ENST00000516881 SPINK5Q9NQ38 1064 aaPredicted RBP6.98□□□□□ -1.29
SCARNA15-202ENST00000516881 KCNA4P22459 653 aa6.94□□□□□ -1.3
SCARNA15-202ENST00000516881 DSG3P32926 999 aa6.93□□□□□ -1.3
SCARNA15-202ENST00000516881 TRHP20396 242 aaPredicted RBP6.89□□□□□ -1.31
SCARNA15-202ENST00000516881 ABCB7O75027 752 aa6.85□□□□□ -1.31
SCARNA15-202ENST00000516881 SLC4A2P04920 1241 aa6.85□□□□□ -1.31
SCARNA15-202ENST00000516881 POTEHQ6S545 545 aa6.84□□□□□ -1.31
SCARNA15-202ENST00000516881 APLP2Q06481 763 aa6.83□□□□□ -1.32
SCARNA15-202ENST00000516881 ZNF219Q9P2Y4 722 aaPredicted RBP6.8□□□□□ -1.32
SCARNA15-202ENST00000516881 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.79□□□□□ -1.32
SCARNA15-202ENST00000516881 HNRNPUL2Q1KMD3 747 aaKnown RBP6.79□□□□□ -1.32
SCARNA15-202ENST00000516881 SAMD1Q6SPF0 538 aaPredicted RBP6.74□□□□□ -1.33
SCARNA15-202ENST00000516881 POLA2Q14181 598 aa6.64□□□□□ -1.35
SCARNA15-202ENST00000516881 MYCNP04198 464 aaPredicted RBP6.63□□□□□ -1.35
SCARNA15-202ENST00000516881 RBM42Q9BTD8 480 aaKnown RBP6.62□□□□□ -1.35
SCARNA15-202ENST00000516881 SLC4A1APQ9BWU0 796 aaKnown RBP6.55□□□□□ -1.36
SCARNA15-202ENST00000516881 CHRDL2Q6WN34 429 aa6.54□□□□□ -1.36
SCARNA15-202ENST00000516881 FOXD4L1Q9NU39 408 aa6.5□□□□□ -1.37
SCARNA15-202ENST00000516881 ATF5Q9Y2D1 282 aaPredicted RBP6.5□□□□□ -1.37
SCARNA15-202ENST00000516881 ZBTB12Q9Y330 459 aaPredicted RBP6.45□□□□□ -1.38
SCARNA15-202ENST00000516881 OSCARQ8IYS5 282 aa6.43□□□□□ -1.38
SCARNA15-202ENST00000516881 AKT1S1Q96B36 256 aa6.43□□□□□ -1.38
SCARNA15-202ENST00000516881 REM2Q8IYK8 340 aaPredicted RBP6.39□□□□□ -1.39
SCARNA15-202ENST00000516881 ZBTB22O15209 634 aa6.35□□□□□ -1.39
SCARNA15-202ENST00000516881 PIP4P2Q8N4L2 257 aa6.35□□□□□ -1.39
SCARNA15-202ENST00000516881 SP7Q8TDD2 431 aaPredicted RBP6.35□□□□□ -1.39
SCARNA15-202ENST00000516881 HAX1O00165 279 aa6.33□□□□□ -1.4
SCARNA15-202ENST00000516881 PITPNM1O00562 1244 aa6.33□□□□□ -1.4
SCARNA15-202ENST00000516881 FBLN2P98095 1184 aa6.29□□□□□ -1.4
SCARNA15-202ENST00000516881 ATXN8OSP0DMR3 200 aa6.27□□□□□ -1.41
SCARNA15-202ENST00000516881 FXR2P51116 673 aaKnown RBP eCLIP6.26□□□□□ -1.41
SCARNA15-202ENST00000516881 CLEC11AQ9Y240 323 aa6.26□□□□□ -1.41
SCARNA15-202ENST00000516881 SPDYE2BA6NHP3 402 aa6.23□□□□□ -1.41
SCARNA15-202ENST00000516881 SPDYE6P0CI01 402 aa6.23□□□□□ -1.41
SCARNA15-202ENST00000516881 SPDYE2Q495Y8 402 aa6.23□□□□□ -1.41
SCARNA15-202ENST00000516881 ZNF692Q9BU19 519 aaPredicted RBP6.21□□□□□ -1.42
SCARNA15-202ENST00000516881 PRKAR2AP13861 404 aaKnown RBP6.2□□□□□ -1.42
SCARNA15-202ENST00000516881 EVX2Q03828 476 aa6.18□□□□□ -1.42
SCARNA15-202ENST00000516881 SPDYE1Q8NFV5 336 aaPredicted RBP6.18□□□□□ -1.42
SCARNA15-202ENST00000516881 MKRN4PQ13434 485 aaPredicted RBP6.17□□□□□ -1.42
SCARNA15-202ENST00000516881 CHADLQ6NUI6 762 aa6.12□□□□□ -1.43
SCARNA15-202ENST00000516881 PRR29P0C7W0 189 aa6.1□□□□□ -1.43
SCARNA15-202ENST00000516881 PABPN1Q86U42 306 aaKnown RBP eCLIP6.1□□□□□ -1.43
SCARNA15-202ENST00000516881 SSUH2Q9Y2M2 353 aa6.1□□□□□ -1.43
SCARNA15-202ENST00000516881 C19orf67A6NJJ6 358 aa6.07□□□□□ -1.44
SCARNA15-202ENST00000516881 GABBR2O75899 941 aa6.04□□□□□ -1.44
SCARNA15-202ENST00000516881 CD44P16070 742 aaKnown RBP5.99□□□□□ -1.45
SCARNA15-202ENST00000516881 LHX8Q68G74 356 aa5.97□□□□□ -1.45
SCARNA15-202ENST00000516881 FARP1Q9Y4F1 1045 aaPredicted RBP5.97□□□□□ -1.45
SCARNA15-202ENST00000516881 CSRNP3Q8WYN3 585 aa5.96□□□□□ -1.46
SCARNA15-202ENST00000516881 EHMT2Q96KQ7 1210 aa5.93□□□□□ -1.46
SCARNA15-202ENST00000516881 DCBLD2Q96PD2 775 aa5.91□□□□□ -1.46
SCARNA15-202ENST00000516881 ZRANB1Q9UGI0 708 aa5.9□□□□□ -1.46
SCARNA15-202ENST00000516881 POTEIP0CG38 1075 aa5.88□□□□□ -1.47
SCARNA15-202ENST00000516881 STAG3Q9UJ98 1225 aa5.88□□□□□ -1.47
SCARNA15-202ENST00000516881 SPDYE4A6NLX3 237 aa5.87□□□□□ -1.47
SCARNA15-202ENST00000516881 CREBZFQ9NS37 354 aa5.86□□□□□ -1.47
SCARNA15-202ENST00000516881 CLCN6P51797 869 aa5.85□□□□□ -1.47
SCARNA15-202ENST00000516881 PAK3O75914 559 aaPredicted RBP5.84□□□□□ -1.47
SCARNA15-202ENST00000516881 ZNF579Q8NAF0 562 aaKnown RBP5.83□□□□□ -1.48
SCARNA15-202ENST00000516881 GALR2O43603 387 aaPredicted RBP5.82□□□□□ -1.48
SCARNA15-202ENST00000516881 NPM1P06748 294 aaKnown RBP eCLIP5.79□□□□□ -1.48
SCARNA15-202ENST00000516881 PHF12Q96QT6 1004 aa5.79□□□□□ -1.48
SCARNA15-202ENST00000516881 PLSCR2Q9NRY7 297 aa5.78□□□□□ -1.48
SCARNA15-202ENST00000516881 TSPYL2Q9H2G4 693 aaPredicted RBP5.73□□□□□ -1.49
SCARNA15-202ENST00000516881 MNX1P50219 401 aaPredicted RBP5.71□□□□□ -1.5
SCARNA15-202ENST00000516881 OTUD5Q96G74 571 aa5.71□□□□□ -1.5
SCARNA15-202ENST00000516881 POTEB2H3BUK9 544 aa5.7□□□□□ -1.5
SCARNA15-202ENST00000516881 PELP1Q8IZL8 1130 aaKnown RBP5.69□□□□□ -1.5
SCARNA15-202ENST00000516881 MS4A3Q96HJ5 214 aa5.69□□□□□ -1.5
SCARNA15-202ENST00000516881 PLEKHG5O94827 1062 aa5.67□□□□□ -1.5
SCARNA15-202ENST00000516881 MIER1Q8N108 512 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms