RNA–Protein interactions for RNA: ENST00000516877.1

RNU6-1234P-201, Transcript of RNA, U6 small nuclear 1234, pseudogene, humanhuman

BASIC

Gene RNU6-1234P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1234P-201ENST00000516877 AEBP2Q6ZN18 517 aaPredicted RBP16.28■□□□□ 0.2
RNU6-1234P-201ENST00000516877 CHIC1Q5VXU3 224 aa15.39■□□□□ 0.05
RNU6-1234P-201ENST00000516877 SENP3Q9H4L4 574 aaPredicted RBP14.13□□□□□ -0.15
RNU6-1234P-201ENST00000516877 PHF23Q9BUL5 403 aaPredicted RBP13.81□□□□□ -0.2
RNU6-1234P-201ENST00000516877 FOXD1Q16676 465 aa13.13□□□□□ -0.31
RNU6-1234P-201ENST00000516877 POTEDQ86YR6 584 aa13.11□□□□□ -0.31
RNU6-1234P-201ENST00000516877 MSH5O43196 834 aa12.63□□□□□ -0.39
RNU6-1234P-201ENST00000516877 PIAS4Q8N2W9 510 aaPredicted RBP12.19□□□□□ -0.46
RNU6-1234P-201ENST00000516877 PLPPR3Q6T4P5 718 aa11.86□□□□□ -0.51
RNU6-1234P-201ENST00000516877 PPP6R1Q9UPN7 881 aa11.81□□□□□ -0.52
RNU6-1234P-201ENST00000516877 ADRA2BP18089 450 aa11.77□□□□□ -0.53
RNU6-1234P-201ENST00000516877 CACNB1Q02641 598 aaPredicted RBP11.12□□□□□ -0.63
RNU6-1234P-201ENST00000516877 DMRT2Q9Y5R5 561 aa11.08□□□□□ -0.64
RNU6-1234P-201ENST00000516877 SCAF1Q9H7N4 1312 aaKnown RBP10.98□□□□□ -0.65
RNU6-1234P-201ENST00000516877 MAPK8IP2Q13387 824 aaPredicted RBP10.95□□□□□ -0.66
RNU6-1234P-201ENST00000516877 DCAF8L1A6NGE4 600 aa10.67□□□□□ -0.7
RNU6-1234P-201ENST00000516877 RNF39Q9H2S5 420 aa10.65□□□□□ -0.7
RNU6-1234P-201ENST00000516877 C1QBPQ07021 282 aaKnown RBP10.54□□□□□ -0.72
RNU6-1234P-201ENST00000516877 HOXD11P31277 338 aaPredicted RBP10.48□□□□□ -0.73
RNU6-1234P-201ENST00000516877 DNAJC5BQ9UF47 199 aa10.32□□□□□ -0.76
RNU6-1234P-201ENST00000516877 RNF216Q9NWF9 866 aaPredicted RBP10.28□□□□□ -0.76
RNU6-1234P-201ENST00000516877 PPP4R3CPQ6ZMV5 832 aa10.26□□□□□ -0.77
RNU6-1234P-201ENST00000516877 CNKSR2Q8WXI2 1034 aa10.24□□□□□ -0.77
RNU6-1234P-201ENST00000516877 POTEHQ6S545 545 aa10.21□□□□□ -0.77
RNU6-1234P-201ENST00000516877 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.01□□□□□ -0.81
RNU6-1234P-201ENST00000516877 NCBP3Q53F19 620 aaKnown RBP9.82□□□□□ -0.84
RNU6-1234P-201ENST00000516877 DSG3P32926 999 aa9.78□□□□□ -0.84
RNU6-1234P-201ENST00000516877 CAPN15O75808 1086 aa9.75□□□□□ -0.85
RNU6-1234P-201ENST00000516877 U3KPZ7 1027 aaPredicted RBP9.67□□□□□ -0.86
RNU6-1234P-201ENST00000516877 SPINK5Q9NQ38 1064 aaPredicted RBP9.66□□□□□ -0.86
RNU6-1234P-201ENST00000516877 APLP2Q06481 763 aa9.55□□□□□ -0.88
RNU6-1234P-201ENST00000516877 NPM3O75607 178 aaKnown RBP9.53□□□□□ -0.88
RNU6-1234P-201ENST00000516877 ZNF219Q9P2Y4 722 aaPredicted RBP9.49□□□□□ -0.89
RNU6-1234P-201ENST00000516877 RBM42Q9BTD8 480 aaKnown RBP9.48□□□□□ -0.89
RNU6-1234P-201ENST00000516877 TRHP20396 242 aaPredicted RBP9.45□□□□□ -0.9
RNU6-1234P-201ENST00000516877 ABCB7O75027 752 aa9.41□□□□□ -0.9
RNU6-1234P-201ENST00000516877 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.38□□□□□ -0.91
RNU6-1234P-201ENST00000516877 HNRNPUL2Q1KMD3 747 aaKnown RBP9.38□□□□□ -0.91
RNU6-1234P-201ENST00000516877 CHRDL2Q6WN34 429 aa9.38□□□□□ -0.91
RNU6-1234P-201ENST00000516877 SP7Q8TDD2 431 aaPredicted RBP9.33□□□□□ -0.92
RNU6-1234P-201ENST00000516877 SAMD1Q6SPF0 538 aaPredicted RBP9.26□□□□□ -0.93
RNU6-1234P-201ENST00000516877 SLC4A2P04920 1241 aa9.21□□□□□ -0.94
RNU6-1234P-201ENST00000516877 AKT1S1Q96B36 256 aa9.09□□□□□ -0.95
RNU6-1234P-201ENST00000516877 POLA2Q14181 598 aa9.07□□□□□ -0.96
RNU6-1234P-201ENST00000516877 HAX1O00165 279 aa9.05□□□□□ -0.96
RNU6-1234P-201ENST00000516877 PIP4P2Q8N4L2 257 aa9□□□□□ -0.97
RNU6-1234P-201ENST00000516877 ZBTB12Q9Y330 459 aaPredicted RBP8.96□□□□□ -0.98
RNU6-1234P-201ENST00000516877 REM2Q8IYK8 340 aaPredicted RBP8.95□□□□□ -0.98
RNU6-1234P-201ENST00000516877 MYCNP04198 464 aaPredicted RBP8.91□□□□□ -0.98
RNU6-1234P-201ENST00000516877 FXR2P51116 673 aaKnown RBP eCLIP8.9□□□□□ -0.98
RNU6-1234P-201ENST00000516877 PITPNM1O00562 1244 aa8.84□□□□□ -0.99
RNU6-1234P-201ENST00000516877 KCNA4P22459 653 aa8.84□□□□□ -0.99
RNU6-1234P-201ENST00000516877 OSCARQ8IYS5 282 aa8.77□□□□□ -1.01
RNU6-1234P-201ENST00000516877 EVX2Q03828 476 aa8.76□□□□□ -1.01
RNU6-1234P-201ENST00000516877 LHX8Q68G74 356 aa8.75□□□□□ -1.01
RNU6-1234P-201ENST00000516877 PRKAR2AP13861 404 aaKnown RBP8.64□□□□□ -1.03
RNU6-1234P-201ENST00000516877 C19orf67A6NJJ6 358 aa8.63□□□□□ -1.03
RNU6-1234P-201ENST00000516877 GABBR2O75899 941 aa8.63□□□□□ -1.03
RNU6-1234P-201ENST00000516877 PLSCR2Q9NRY7 297 aa8.63□□□□□ -1.03
RNU6-1234P-201ENST00000516877 ATF5Q9Y2D1 282 aaPredicted RBP8.6□□□□□ -1.03
RNU6-1234P-201ENST00000516877 SPDYE2BA6NHP3 402 aa8.59□□□□□ -1.03
RNU6-1234P-201ENST00000516877 SPDYE6P0CI01 402 aa8.59□□□□□ -1.03
RNU6-1234P-201ENST00000516877 SPDYE2Q495Y8 402 aa8.59□□□□□ -1.03
RNU6-1234P-201ENST00000516877 SPDYE1Q8NFV5 336 aaPredicted RBP8.58□□□□□ -1.04
RNU6-1234P-201ENST00000516877 CLEC11AQ9Y240 323 aa8.55□□□□□ -1.04
RNU6-1234P-201ENST00000516877 FOXD4L1Q9NU39 408 aa8.52□□□□□ -1.05
RNU6-1234P-201ENST00000516877 CLCN6P51797 869 aa8.49□□□□□ -1.05
RNU6-1234P-201ENST00000516877 FBLN2P98095 1184 aa8.49□□□□□ -1.05
RNU6-1234P-201ENST00000516877 ZNF692Q9BU19 519 aaPredicted RBP8.39□□□□□ -1.07
RNU6-1234P-201ENST00000516877 CHADLQ6NUI6 762 aa8.38□□□□□ -1.07
RNU6-1234P-201ENST00000516877 POTEIP0CG38 1075 aa8.37□□□□□ -1.07
RNU6-1234P-201ENST00000516877 PRR29P0C7W0 189 aa8.36□□□□□ -1.07
RNU6-1234P-201ENST00000516877 ATXN8OSP0DMR3 200 aa8.36□□□□□ -1.07
RNU6-1234P-201ENST00000516877 SSUH2Q9Y2M2 353 aa8.36□□□□□ -1.07
RNU6-1234P-201ENST00000516877 DCBLD2Q96PD2 775 aa8.35□□□□□ -1.07
RNU6-1234P-201ENST00000516877 CD44P16070 742 aaKnown RBP8.34□□□□□ -1.07
RNU6-1234P-201ENST00000516877 SLC4A1APQ9BWU0 796 aaKnown RBP8.32□□□□□ -1.08
RNU6-1234P-201ENST00000516877 PCDH10Q9P2E7 1040 aa8.28□□□□□ -1.08
RNU6-1234P-201ENST00000516877 POTEMA6NI47 508 aa8.25□□□□□ -1.09
RNU6-1234P-201ENST00000516877 FARP1Q9Y4F1 1045 aaPredicted RBP8.25□□□□□ -1.09
RNU6-1234P-201ENST00000516877 POTEGQ6S5H5 508 aa8.21□□□□□ -1.1
RNU6-1234P-201ENST00000516877 MKRN4PQ13434 485 aaPredicted RBP8.2□□□□□ -1.1
RNU6-1234P-201ENST00000516877 PABPN1Q86U42 306 aaKnown RBP eCLIP8.2□□□□□ -1.1
RNU6-1234P-201ENST00000516877 OTUD5Q96G74 571 aa8.2□□□□□ -1.1
RNU6-1234P-201ENST00000516877 ZNF579Q8NAF0 562 aaKnown RBP8.19□□□□□ -1.1
RNU6-1234P-201ENST00000516877 ZRANB1Q9UGI0 708 aa8.14□□□□□ -1.11
RNU6-1234P-201ENST00000516877 POTEB2H3BUK9 544 aa8.07□□□□□ -1.12
RNU6-1234P-201ENST00000516877 GALR2O43603 387 aaPredicted RBP8.07□□□□□ -1.12
RNU6-1234P-201ENST00000516877 ZBTB22O15209 634 aa8.06□□□□□ -1.12
RNU6-1234P-201ENST00000516877 PAK3O75914 559 aaPredicted RBP8.06□□□□□ -1.12
RNU6-1234P-201ENST00000516877 MAMSTRQ6ZN01 415 aa8.06□□□□□ -1.12
RNU6-1234P-201ENST00000516877 STAG3Q9UJ98 1225 aa7.99□□□□□ -1.13
RNU6-1234P-201ENST00000516877 C7P10643 843 aa7.97□□□□□ -1.13
RNU6-1234P-201ENST00000516877 SLC39A7Q92504 469 aa7.97□□□□□ -1.13
RNU6-1234P-201ENST00000516877 METRNQ9UJH8 293 aa7.96□□□□□ -1.14
RNU6-1234P-201ENST00000516877 SCUBE2Q9NQ36 999 aa7.95□□□□□ -1.14
RNU6-1234P-201ENST00000516877 CREBZFQ9NS37 354 aa7.95□□□□□ -1.14
RNU6-1234P-201ENST00000516877 FAM163AQ96GL9 167 aaPredicted RBP7.94□□□□□ -1.14
RNU6-1234P-201ENST00000516877 ASTLQ6HA08 431 aaPredicted RBP7.92□□□□□ -1.14
RNU6-1234P-201ENST00000516877 PELP1Q8IZL8 1130 aaKnown RBP7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms