RNA–Protein interactions for RNA: ENST00000516832.2

RNU6-678P-201, Transcript of RNA, U6 small nuclear 678, pseudogene, humanhuman

BASIC

Gene RNU6-678P, Length 109 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-678P-201ENST00000516832 AEBP2Q6ZN18 517 aaPredicted RBP22.54■■□□□ 1.2
RNU6-678P-201ENST00000516832 CHIC1Q5VXU3 224 aa22■■□□□ 1.11
RNU6-678P-201ENST00000516832 PHF23Q9BUL5 403 aaPredicted RBP19.4■□□□□ 0.7
RNU6-678P-201ENST00000516832 SENP3Q9H4L4 574 aaPredicted RBP19.02■□□□□ 0.64
RNU6-678P-201ENST00000516832 PLPPR3Q6T4P5 718 aa17.82■□□□□ 0.44
RNU6-678P-201ENST00000516832 FOXD1Q16676 465 aa17.72■□□□□ 0.43
RNU6-678P-201ENST00000516832 PPP6R1Q9UPN7 881 aa17.11■□□□□ 0.33
RNU6-678P-201ENST00000516832 ADRA2BP18089 450 aa17.05■□□□□ 0.32
RNU6-678P-201ENST00000516832 PIAS4Q8N2W9 510 aaPredicted RBP16.64■□□□□ 0.25
RNU6-678P-201ENST00000516832 MSH5O43196 834 aa16.24■□□□□ 0.19
RNU6-678P-201ENST00000516832 PPP4R3CPQ6ZMV5 832 aa15.74■□□□□ 0.11
RNU6-678P-201ENST00000516832 SCAF1Q9H7N4 1312 aaKnown RBP15.5■□□□□ 0.07
RNU6-678P-201ENST00000516832 MAPK8IP2Q13387 824 aaPredicted RBP15.48■□□□□ 0.07
RNU6-678P-201ENST00000516832 KCNA4P22459 653 aa15.43■□□□□ 0.06
RNU6-678P-201ENST00000516832 NCBP3Q53F19 620 aaKnown RBP15.26■□□□□ 0.03
RNU6-678P-201ENST00000516832 CNKSR2Q8WXI2 1034 aa15.26■□□□□ 0.03
RNU6-678P-201ENST00000516832 DMRT2Q9Y5R5 561 aa15.23■□□□□ 0.03
RNU6-678P-201ENST00000516832 NPM3O75607 178 aaKnown RBP15.13■□□□□ 0.01
RNU6-678P-201ENST00000516832 RNF216Q9NWF9 866 aaPredicted RBP14.98□□□□□ -0.01
RNU6-678P-201ENST00000516832 HOXD11P31277 338 aaPredicted RBP14.94□□□□□ -0.02
RNU6-678P-201ENST00000516832 POTEDQ86YR6 584 aa14.79□□□□□ -0.04
RNU6-678P-201ENST00000516832 DNAJC5BQ9UF47 199 aa14.74□□□□□ -0.05
RNU6-678P-201ENST00000516832 SLC4A1APQ9BWU0 796 aaKnown RBP14.64□□□□□ -0.07
RNU6-678P-201ENST00000516832 DCAF8L1A6NGE4 600 aa14.45□□□□□ -0.1
RNU6-678P-201ENST00000516832 SLC4A2P04920 1241 aa14.32□□□□□ -0.12
RNU6-678P-201ENST00000516832 ZBTB22O15209 634 aa14.25□□□□□ -0.13
RNU6-678P-201ENST00000516832 EHMT2Q96KQ7 1210 aa14.25□□□□□ -0.13
RNU6-678P-201ENST00000516832 CSRNP3Q8WYN3 585 aa14.17□□□□□ -0.14
RNU6-678P-201ENST00000516832 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.14□□□□□ -0.15
RNU6-678P-201ENST00000516832 FOXD4L1Q9NU39 408 aa14.14□□□□□ -0.15
RNU6-678P-201ENST00000516832 U3KPZ7 1027 aaPredicted RBP14.01□□□□□ -0.17
RNU6-678P-201ENST00000516832 RNF39Q9H2S5 420 aa13.98□□□□□ -0.17
RNU6-678P-201ENST00000516832 MYCNP04198 464 aaPredicted RBP13.93□□□□□ -0.18
RNU6-678P-201ENST00000516832 C1QBPQ07021 282 aaKnown RBP13.77□□□□□ -0.21
RNU6-678P-201ENST00000516832 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.73□□□□□ -0.21
RNU6-678P-201ENST00000516832 HNRNPUL2Q1KMD3 747 aaKnown RBP13.73□□□□□ -0.21
RNU6-678P-201ENST00000516832 SAMD1Q6SPF0 538 aaPredicted RBP13.71□□□□□ -0.21
RNU6-678P-201ENST00000516832 ATXN8OSP0DMR3 200 aa13.66□□□□□ -0.22
RNU6-678P-201ENST00000516832 ATF5Q9Y2D1 282 aaPredicted RBP13.64□□□□□ -0.23
RNU6-678P-201ENST00000516832 SPINK5Q9NQ38 1064 aaPredicted RBP13.6□□□□□ -0.23
RNU6-678P-201ENST00000516832 APLP2Q06481 763 aa13.54□□□□□ -0.24
RNU6-678P-201ENST00000516832 CACNB1Q02641 598 aaPredicted RBP13.52□□□□□ -0.25
RNU6-678P-201ENST00000516832 CAPN15O75808 1086 aa13.46□□□□□ -0.25
RNU6-678P-201ENST00000516832 TRHP20396 242 aaPredicted RBP13.42□□□□□ -0.26
RNU6-678P-201ENST00000516832 ZNF219Q9P2Y4 722 aaPredicted RBP13.41□□□□□ -0.26
RNU6-678P-201ENST00000516832 DSG3P32926 999 aa13.31□□□□□ -0.28
RNU6-678P-201ENST00000516832 ABCB7O75027 752 aa13.25□□□□□ -0.29
RNU6-678P-201ENST00000516832 POLA2Q14181 598 aa13.24□□□□□ -0.29
RNU6-678P-201ENST00000516832 MKRN4PQ13434 485 aaPredicted RBP13.06□□□□□ -0.32
RNU6-678P-201ENST00000516832 ZBTB12Q9Y330 459 aaPredicted RBP12.97□□□□□ -0.33
RNU6-678P-201ENST00000516832 FBLN2P98095 1184 aa12.93□□□□□ -0.34
RNU6-678P-201ENST00000516832 OSCARQ8IYS5 282 aa12.79□□□□□ -0.36
RNU6-678P-201ENST00000516832 FKBP8Q14318 412 aa12.73□□□□□ -0.37
RNU6-678P-201ENST00000516832 SPDYE4A6NLX3 237 aa12.69□□□□□ -0.38
RNU6-678P-201ENST00000516832 SPDYE2BA6NHP3 402 aa12.66□□□□□ -0.38
RNU6-678P-201ENST00000516832 SPDYE6P0CI01 402 aa12.66□□□□□ -0.38
RNU6-678P-201ENST00000516832 SPDYE2Q495Y8 402 aa12.66□□□□□ -0.38
RNU6-678P-201ENST00000516832 SSUH2Q9Y2M2 353 aa12.63□□□□□ -0.39
RNU6-678P-201ENST00000516832 RBM42Q9BTD8 480 aaKnown RBP12.6□□□□□ -0.39
RNU6-678P-201ENST00000516832 ZNF692Q9BU19 519 aaPredicted RBP12.6□□□□□ -0.39
RNU6-678P-201ENST00000516832 PROM2Q8N271 834 aa12.58□□□□□ -0.4
RNU6-678P-201ENST00000516832 AKT1S1Q96B36 256 aa12.49□□□□□ -0.41
RNU6-678P-201ENST00000516832 PABPN1Q86U42 306 aaKnown RBP eCLIP12.46□□□□□ -0.41
RNU6-678P-201ENST00000516832 REM2Q8IYK8 340 aaPredicted RBP12.4□□□□□ -0.42
RNU6-678P-201ENST00000516832 SPDYE1Q8NFV5 336 aaPredicted RBP12.27□□□□□ -0.45
RNU6-678P-201ENST00000516832 PITPNM1O00562 1244 aa12.25□□□□□ -0.45
RNU6-678P-201ENST00000516832 FBXO3Q9UK99 471 aa12.22□□□□□ -0.45
RNU6-678P-201ENST00000516832 STAG3Q9UJ98 1225 aa12.21□□□□□ -0.45
RNU6-678P-201ENST00000516832 CLEC11AQ9Y240 323 aa12.19□□□□□ -0.46
RNU6-678P-201ENST00000516832 VASPP50552 380 aaPredicted RBP12.12□□□□□ -0.47
RNU6-678P-201ENST00000516832 CHRDL2Q6WN34 429 aa12.1□□□□□ -0.47
RNU6-678P-201ENST00000516832 PRR29P0C7W0 189 aa12.09□□□□□ -0.47
RNU6-678P-201ENST00000516832 FXR2P51116 673 aaKnown RBP eCLIP12.04□□□□□ -0.48
RNU6-678P-201ENST00000516832 CREBZFQ9NS37 354 aa12.03□□□□□ -0.48
RNU6-678P-201ENST00000516832 IFNLR1Q8IU57 520 aaPredicted RBP11.99□□□□□ -0.49
RNU6-678P-201ENST00000516832 MIER1Q8N108 512 aa11.99□□□□□ -0.49
RNU6-678P-201ENST00000516832 PIP4P2Q8N4L2 257 aa11.99□□□□□ -0.49
RNU6-678P-201ENST00000516832 PLCD3Q8N3E9 789 aa11.96□□□□□ -0.49
RNU6-678P-201ENST00000516832 MNX1P50219 401 aaPredicted RBP11.95□□□□□ -0.5
RNU6-678P-201ENST00000516832 CHADLQ6NUI6 762 aa11.94□□□□□ -0.5
RNU6-678P-201ENST00000516832 PRKAR2AP13861 404 aaKnown RBP11.92□□□□□ -0.5
RNU6-678P-201ENST00000516832 PLEKHG5O94827 1062 aa11.84□□□□□ -0.51
RNU6-678P-201ENST00000516832 FARP1Q9Y4F1 1045 aaPredicted RBP11.83□□□□□ -0.52
RNU6-678P-201ENST00000516832 KLHL34Q8N239 644 aa11.82□□□□□ -0.52
RNU6-678P-201ENST00000516832 ZBTB47Q9UFB7 747 aaPredicted RBP11.8□□□□□ -0.52
RNU6-678P-201ENST00000516832 NUBP1P53384 320 aa11.78□□□□□ -0.52
RNU6-678P-201ENST00000516832 SPOCK2Q92563 424 aa11.78□□□□□ -0.52
RNU6-678P-201ENST00000516832 NPM1P06748 294 aaKnown RBP eCLIP11.72□□□□□ -0.53
RNU6-678P-201ENST00000516832 RASEFQ8IZ41 740 aa11.7□□□□□ -0.54
RNU6-678P-201ENST00000516832 POTEHQ6S545 545 aa11.69□□□□□ -0.54
RNU6-678P-201ENST00000516832 RTN4Q9NQC3 1192 aaKnown RBP11.67□□□□□ -0.54
RNU6-678P-201ENST00000516832 AMER1Q5JTC6 1135 aaPredicted RBP11.63□□□□□ -0.55
RNU6-678P-201ENST00000516832 C19orf67A6NJJ6 358 aa11.62□□□□□ -0.55
RNU6-678P-201ENST00000516832 PKD2Q13563 968 aa11.62□□□□□ -0.55
RNU6-678P-201ENST00000516832 FAM212AQ96EL1 285 aa11.58□□□□□ -0.56
RNU6-678P-201ENST00000516832 CD44P16070 742 aaKnown RBP11.57□□□□□ -0.56
RNU6-678P-201ENST00000516832 DCAF8Q5TAQ9 597 aa11.57□□□□□ -0.56
RNU6-678P-201ENST00000516832 TSPYL2Q9H2G4 693 aaPredicted RBP11.57□□□□□ -0.56
RNU6-678P-201ENST00000516832 GSE1Q14687 1217 aa11.56□□□□□ -0.56
RNU6-678P-201ENST00000516832 CIZ1Q9ULV3 898 aaPredicted RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms