RNA–Protein interactions for RNA: ENST00000516790.1

RNU6-566P-201, Transcript of RNA, U6 small nuclear 566, pseudogene, humanhuman

BASIC

Gene RNU6-566P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-566P-201ENST00000516790 AEBP2Q6ZN18 517 aaPredicted RBP18.68■□□□□ 0.58
RNU6-566P-201ENST00000516790 CHIC1Q5VXU3 224 aa17.99■□□□□ 0.47
RNU6-566P-201ENST00000516790 SENP3Q9H4L4 574 aaPredicted RBP15.88■□□□□ 0.13
RNU6-566P-201ENST00000516790 PHF23Q9BUL5 403 aaPredicted RBP15.81■□□□□ 0.12
RNU6-566P-201ENST00000516790 FOXD1Q16676 465 aa14.78□□□□□ -0.04
RNU6-566P-201ENST00000516790 PLPPR3Q6T4P5 718 aa14.49□□□□□ -0.09
RNU6-566P-201ENST00000516790 PPP6R1Q9UPN7 881 aa14.04□□□□□ -0.16
RNU6-566P-201ENST00000516790 ADRA2BP18089 450 aa14.01□□□□□ -0.17
RNU6-566P-201ENST00000516790 PIAS4Q8N2W9 510 aaPredicted RBP13.87□□□□□ -0.19
RNU6-566P-201ENST00000516790 MSH5O43196 834 aa13.73□□□□□ -0.21
RNU6-566P-201ENST00000516790 POTEDQ86YR6 584 aa12.97□□□□□ -0.33
RNU6-566P-201ENST00000516790 SCAF1Q9H7N4 1312 aaKnown RBP12.81□□□□□ -0.36
RNU6-566P-201ENST00000516790 MAPK8IP2Q13387 824 aaPredicted RBP12.8□□□□□ -0.36
RNU6-566P-201ENST00000516790 PPP4R3CPQ6ZMV5 832 aa12.75□□□□□ -0.37
RNU6-566P-201ENST00000516790 DMRT2Q9Y5R5 561 aa12.64□□□□□ -0.39
RNU6-566P-201ENST00000516790 CNKSR2Q8WXI2 1034 aa12.45□□□□□ -0.42
RNU6-566P-201ENST00000516790 NCBP3Q53F19 620 aaKnown RBP12.33□□□□□ -0.44
RNU6-566P-201ENST00000516790 HOXD11P31277 338 aaPredicted RBP12.28□□□□□ -0.44
RNU6-566P-201ENST00000516790 RNF216Q9NWF9 866 aaPredicted RBP12.26□□□□□ -0.45
RNU6-566P-201ENST00000516790 NPM3O75607 178 aaKnown RBP12.15□□□□□ -0.46
RNU6-566P-201ENST00000516790 KCNA4P22459 653 aa12.14□□□□□ -0.47
RNU6-566P-201ENST00000516790 DCAF8L1A6NGE4 600 aa12.12□□□□□ -0.47
RNU6-566P-201ENST00000516790 DNAJC5BQ9UF47 199 aa11.82□□□□□ -0.52
RNU6-566P-201ENST00000516790 RNF39Q9H2S5 420 aa11.74□□□□□ -0.53
RNU6-566P-201ENST00000516790 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.71□□□□□ -0.53
RNU6-566P-201ENST00000516790 CACNB1Q02641 598 aaPredicted RBP11.64□□□□□ -0.55
RNU6-566P-201ENST00000516790 C1QBPQ07021 282 aaKnown RBP11.59□□□□□ -0.55
RNU6-566P-201ENST00000516790 SLC4A2P04920 1241 aa11.54□□□□□ -0.56
RNU6-566P-201ENST00000516790 SLC4A1APQ9BWU0 796 aaKnown RBP11.52□□□□□ -0.57
RNU6-566P-201ENST00000516790 U3KPZ7 1027 aaPredicted RBP11.48□□□□□ -0.57
RNU6-566P-201ENST00000516790 SPINK5Q9NQ38 1064 aaPredicted RBP11.25□□□□□ -0.61
RNU6-566P-201ENST00000516790 FOXD4L1Q9NU39 408 aa11.25□□□□□ -0.61
RNU6-566P-201ENST00000516790 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.24□□□□□ -0.61
RNU6-566P-201ENST00000516790 HNRNPUL2Q1KMD3 747 aaKnown RBP11.24□□□□□ -0.61
RNU6-566P-201ENST00000516790 MYCNP04198 464 aaPredicted RBP11.23□□□□□ -0.61
RNU6-566P-201ENST00000516790 CAPN15O75808 1086 aa11.22□□□□□ -0.61
RNU6-566P-201ENST00000516790 APLP2Q06481 763 aa11.19□□□□□ -0.62
RNU6-566P-201ENST00000516790 SAMD1Q6SPF0 538 aaPredicted RBP11.19□□□□□ -0.62
RNU6-566P-201ENST00000516790 ZBTB22O15209 634 aa11.16□□□□□ -0.62
RNU6-566P-201ENST00000516790 TRHP20396 242 aaPredicted RBP11.11□□□□□ -0.63
RNU6-566P-201ENST00000516790 DSG3P32926 999 aa11.09□□□□□ -0.63
RNU6-566P-201ENST00000516790 ZNF219Q9P2Y4 722 aaPredicted RBP11.08□□□□□ -0.64
RNU6-566P-201ENST00000516790 ABCB7O75027 752 aa10.98□□□□□ -0.65
RNU6-566P-201ENST00000516790 ATF5Q9Y2D1 282 aaPredicted RBP10.96□□□□□ -0.65
RNU6-566P-201ENST00000516790 CSRNP3Q8WYN3 585 aa10.9□□□□□ -0.66
RNU6-566P-201ENST00000516790 ATXN8OSP0DMR3 200 aa10.89□□□□□ -0.67
RNU6-566P-201ENST00000516790 EHMT2Q96KQ7 1210 aa10.88□□□□□ -0.67
RNU6-566P-201ENST00000516790 POLA2Q14181 598 aa10.86□□□□□ -0.67
RNU6-566P-201ENST00000516790 ZBTB12Q9Y330 459 aaPredicted RBP10.64□□□□□ -0.71
RNU6-566P-201ENST00000516790 RBM42Q9BTD8 480 aaKnown RBP10.56□□□□□ -0.72
RNU6-566P-201ENST00000516790 FBLN2P98095 1184 aa10.51□□□□□ -0.73
RNU6-566P-201ENST00000516790 OSCARQ8IYS5 282 aa10.49□□□□□ -0.73
RNU6-566P-201ENST00000516790 MKRN4PQ13434 485 aaPredicted RBP10.46□□□□□ -0.73
RNU6-566P-201ENST00000516790 AKT1S1Q96B36 256 aa10.4□□□□□ -0.74
RNU6-566P-201ENST00000516790 SPDYE2BA6NHP3 402 aa10.35□□□□□ -0.75
RNU6-566P-201ENST00000516790 SPDYE6P0CI01 402 aa10.35□□□□□ -0.75
RNU6-566P-201ENST00000516790 SPDYE2Q495Y8 402 aa10.35□□□□□ -0.75
RNU6-566P-201ENST00000516790 REM2Q8IYK8 340 aaPredicted RBP10.29□□□□□ -0.76
RNU6-566P-201ENST00000516790 ZNF692Q9BU19 519 aaPredicted RBP10.28□□□□□ -0.76
RNU6-566P-201ENST00000516790 CHRDL2Q6WN34 429 aa10.23□□□□□ -0.77
RNU6-566P-201ENST00000516790 SSUH2Q9Y2M2 353 aa10.23□□□□□ -0.77
RNU6-566P-201ENST00000516790 POTEHQ6S545 545 aa10.22□□□□□ -0.77
RNU6-566P-201ENST00000516790 PITPNM1O00562 1244 aa10.17□□□□□ -0.78
RNU6-566P-201ENST00000516790 PABPN1Q86U42 306 aaKnown RBP eCLIP10.13□□□□□ -0.79
RNU6-566P-201ENST00000516790 SPDYE4A6NLX3 237 aa10.1□□□□□ -0.79
RNU6-566P-201ENST00000516790 SPDYE1Q8NFV5 336 aaPredicted RBP10.1□□□□□ -0.79
RNU6-566P-201ENST00000516790 CLEC11AQ9Y240 323 aa10.09□□□□□ -0.79
RNU6-566P-201ENST00000516790 PIP4P2Q8N4L2 257 aa10.05□□□□□ -0.8
RNU6-566P-201ENST00000516790 FXR2P51116 673 aaKnown RBP eCLIP10.04□□□□□ -0.8
RNU6-566P-201ENST00000516790 PRR29P0C7W0 189 aa9.96□□□□□ -0.82
RNU6-566P-201ENST00000516790 PRKAR2AP13861 404 aaKnown RBP9.92□□□□□ -0.82
RNU6-566P-201ENST00000516790 STAG3Q9UJ98 1225 aa9.91□□□□□ -0.82
RNU6-566P-201ENST00000516790 PROM2Q8N271 834 aa9.88□□□□□ -0.83
RNU6-566P-201ENST00000516790 FKBP8Q14318 412 aa9.87□□□□□ -0.83
RNU6-566P-201ENST00000516790 CHADLQ6NUI6 762 aa9.87□□□□□ -0.83
RNU6-566P-201ENST00000516790 HAX1O00165 279 aa9.81□□□□□ -0.84
RNU6-566P-201ENST00000516790 CREBZFQ9NS37 354 aa9.77□□□□□ -0.85
RNU6-566P-201ENST00000516790 FARP1Q9Y4F1 1045 aaPredicted RBP9.74□□□□□ -0.85
RNU6-566P-201ENST00000516790 C19orf67A6NJJ6 358 aa9.71□□□□□ -0.86
RNU6-566P-201ENST00000516790 EVX2Q03828 476 aa9.71□□□□□ -0.86
RNU6-566P-201ENST00000516790 SP7Q8TDD2 431 aaPredicted RBP9.69□□□□□ -0.86
RNU6-566P-201ENST00000516790 MNX1P50219 401 aaPredicted RBP9.62□□□□□ -0.87
RNU6-566P-201ENST00000516790 MIER1Q8N108 512 aa9.62□□□□□ -0.87
RNU6-566P-201ENST00000516790 CD44P16070 742 aaKnown RBP9.61□□□□□ -0.87
RNU6-566P-201ENST00000516790 NPM1P06748 294 aaKnown RBP eCLIP9.6□□□□□ -0.87
RNU6-566P-201ENST00000516790 PLEKHG5O94827 1062 aa9.58□□□□□ -0.88
RNU6-566P-201ENST00000516790 FBXO3Q9UK99 471 aa9.58□□□□□ -0.88
RNU6-566P-201ENST00000516790 PLCD3Q8N3E9 789 aa9.57□□□□□ -0.88
RNU6-566P-201ENST00000516790 ZRANB1Q9UGI0 708 aa9.53□□□□□ -0.88
RNU6-566P-201ENST00000516790 GABBR2O75899 941 aa9.51□□□□□ -0.89
RNU6-566P-201ENST00000516790 PAK3O75914 559 aaPredicted RBP9.49□□□□□ -0.89
RNU6-566P-201ENST00000516790 ZNF579Q8NAF0 562 aaKnown RBP9.47□□□□□ -0.89
RNU6-566P-201ENST00000516790 ZBTB47Q9UFB7 747 aaPredicted RBP9.47□□□□□ -0.89
RNU6-566P-201ENST00000516790 VASPP50552 380 aaPredicted RBP9.45□□□□□ -0.9
RNU6-566P-201ENST00000516790 CLCN6P51797 869 aa9.44□□□□□ -0.9
RNU6-566P-201ENST00000516790 TSPYL2Q9H2G4 693 aaPredicted RBP9.44□□□□□ -0.9
RNU6-566P-201ENST00000516790 RASEFQ8IZ41 740 aa9.41□□□□□ -0.9
RNU6-566P-201ENST00000516790 PHF12Q96QT6 1004 aa9.4□□□□□ -0.9
RNU6-566P-201ENST00000516790 NUBP1P53384 320 aa9.39□□□□□ -0.91
RNU6-566P-201ENST00000516790 KLHL34Q8N239 644 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms