RNA–Protein interactions for RNA: ENST00000516759.1

RNU7-28P-201, Transcript of RNA, U7 small nuclear 28 pseudogene, humanhuman

BASIC

Gene RNU7-28P, Length 62 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU7-28P-201ENST00000516759 AEBP2Q6ZN18 517 aaPredicted RBP9.08□□□□□ -0.96
RNU7-28P-201ENST00000516759 CHIC1Q5VXU3 224 aa8.79□□□□□ -1
RNU7-28P-201ENST00000516759 PHF23Q9BUL5 403 aaPredicted RBP7.85□□□□□ -1.15
RNU7-28P-201ENST00000516759 SENP3Q9H4L4 574 aaPredicted RBP7.5□□□□□ -1.21
RNU7-28P-201ENST00000516759 PLPPR3Q6T4P5 718 aa7.09□□□□□ -1.27
RNU7-28P-201ENST00000516759 FOXD1Q16676 465 aa7.08□□□□□ -1.28
RNU7-28P-201ENST00000516759 PPP6R1Q9UPN7 881 aa6.93□□□□□ -1.3
RNU7-28P-201ENST00000516759 ADRA2BP18089 450 aa6.88□□□□□ -1.31
RNU7-28P-201ENST00000516759 PIAS4Q8N2W9 510 aaPredicted RBP6.61□□□□□ -1.35
RNU7-28P-201ENST00000516759 MSH5O43196 834 aa6.36□□□□□ -1.39
RNU7-28P-201ENST00000516759 PPP4R3CPQ6ZMV5 832 aa6.32□□□□□ -1.4
RNU7-28P-201ENST00000516759 KCNA4P22459 653 aa6.28□□□□□ -1.4
RNU7-28P-201ENST00000516759 MAPK8IP2Q13387 824 aaPredicted RBP6.28□□□□□ -1.4
RNU7-28P-201ENST00000516759 NPM3O75607 178 aaKnown RBP6.1□□□□□ -1.43
RNU7-28P-201ENST00000516759 SCAF1Q9H7N4 1312 aaKnown RBP6.08□□□□□ -1.44
RNU7-28P-201ENST00000516759 CNKSR2Q8WXI2 1034 aa6.08□□□□□ -1.44
RNU7-28P-201ENST00000516759 DMRT2Q9Y5R5 561 aa6.05□□□□□ -1.44
RNU7-28P-201ENST00000516759 NCBP3Q53F19 620 aaKnown RBP6.04□□□□□ -1.44
RNU7-28P-201ENST00000516759 HOXD11P31277 338 aaPredicted RBP5.95□□□□□ -1.46
RNU7-28P-201ENST00000516759 RNF216Q9NWF9 866 aaPredicted RBP5.95□□□□□ -1.46
RNU7-28P-201ENST00000516759 SLC4A1APQ9BWU0 796 aaKnown RBP5.91□□□□□ -1.46
RNU7-28P-201ENST00000516759 ZBTB22O15209 634 aa5.84□□□□□ -1.47
RNU7-28P-201ENST00000516759 POTEDQ86YR6 584 aa5.84□□□□□ -1.47
RNU7-28P-201ENST00000516759 EHMT2Q96KQ7 1210 aa5.84□□□□□ -1.47
RNU7-28P-201ENST00000516759 DNAJC5BQ9UF47 199 aa5.84□□□□□ -1.47
RNU7-28P-201ENST00000516759 SLC4A2P04920 1241 aa5.8□□□□□ -1.48
RNU7-28P-201ENST00000516759 CSRNP3Q8WYN3 585 aa5.8□□□□□ -1.48
RNU7-28P-201ENST00000516759 DCAF8L1A6NGE4 600 aa5.76□□□□□ -1.49
RNU7-28P-201ENST00000516759 FOXD4L1Q9NU39 408 aa5.67□□□□□ -1.5
RNU7-28P-201ENST00000516759 GRWD1Q9BQ67 446 aaKnown RBP eCLIP5.62□□□□□ -1.51
RNU7-28P-201ENST00000516759 U3KPZ7 1027 aaPredicted RBP5.62□□□□□ -1.51
RNU7-28P-201ENST00000516759 ATF5Q9Y2D1 282 aaPredicted RBP5.57□□□□□ -1.52
RNU7-28P-201ENST00000516759 MYCNP04198 464 aaPredicted RBP5.54□□□□□ -1.52
RNU7-28P-201ENST00000516759 RNF39Q9H2S5 420 aa5.54□□□□□ -1.52
RNU7-28P-201ENST00000516759 SPINK5Q9NQ38 1064 aaPredicted RBP5.48□□□□□ -1.53
RNU7-28P-201ENST00000516759 ATXN8OSP0DMR3 200 aa5.43□□□□□ -1.54
RNU7-28P-201ENST00000516759 C1QBPQ07021 282 aaKnown RBP5.41□□□□□ -1.54
RNU7-28P-201ENST00000516759 SAMD1Q6SPF0 538 aaPredicted RBP5.41□□□□□ -1.54
RNU7-28P-201ENST00000516759 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.37□□□□□ -1.55
RNU7-28P-201ENST00000516759 TRHP20396 242 aaPredicted RBP5.37□□□□□ -1.55
RNU7-28P-201ENST00000516759 HNRNPUL2Q1KMD3 747 aaKnown RBP5.37□□□□□ -1.55
RNU7-28P-201ENST00000516759 CAPN15O75808 1086 aa5.36□□□□□ -1.55
RNU7-28P-201ENST00000516759 ZNF219Q9P2Y4 722 aaPredicted RBP5.35□□□□□ -1.55
RNU7-28P-201ENST00000516759 ABCB7O75027 752 aa5.33□□□□□ -1.56
RNU7-28P-201ENST00000516759 CACNB1Q02641 598 aaPredicted RBP5.33□□□□□ -1.56
RNU7-28P-201ENST00000516759 DSG3P32926 999 aa5.31□□□□□ -1.56
RNU7-28P-201ENST00000516759 MKRN4PQ13434 485 aaPredicted RBP5.3□□□□□ -1.56
RNU7-28P-201ENST00000516759 POLA2Q14181 598 aa5.3□□□□□ -1.56
RNU7-28P-201ENST00000516759 APLP2Q06481 763 aa5.26□□□□□ -1.57
RNU7-28P-201ENST00000516759 FKBP8Q14318 412 aa5.18□□□□□ -1.58
RNU7-28P-201ENST00000516759 OSCARQ8IYS5 282 aa5.14□□□□□ -1.59
RNU7-28P-201ENST00000516759 FBLN2P98095 1184 aa5.11□□□□□ -1.59
RNU7-28P-201ENST00000516759 SPDYE4A6NLX3 237 aa5.09□□□□□ -1.59
RNU7-28P-201ENST00000516759 PROM2Q8N271 834 aa5.07□□□□□ -1.6
RNU7-28P-201ENST00000516759 ZBTB12Q9Y330 459 aaPredicted RBP5.06□□□□□ -1.6
RNU7-28P-201ENST00000516759 SSUH2Q9Y2M2 353 aa5.04□□□□□ -1.6
RNU7-28P-201ENST00000516759 ZNF692Q9BU19 519 aaPredicted RBP5.03□□□□□ -1.6
RNU7-28P-201ENST00000516759 SPDYE2BA6NHP3 402 aa5.02□□□□□ -1.61
RNU7-28P-201ENST00000516759 SPDYE6P0CI01 402 aa5.02□□□□□ -1.61
RNU7-28P-201ENST00000516759 SPDYE2Q495Y8 402 aa5.02□□□□□ -1.61
RNU7-28P-201ENST00000516759 PABPN1Q86U42 306 aaKnown RBP eCLIP4.99□□□□□ -1.61
RNU7-28P-201ENST00000516759 REM2Q8IYK8 340 aaPredicted RBP4.94□□□□□ -1.62
RNU7-28P-201ENST00000516759 AKT1S1Q96B36 256 aa4.93□□□□□ -1.62
RNU7-28P-201ENST00000516759 RBM42Q9BTD8 480 aaKnown RBP4.91□□□□□ -1.62
RNU7-28P-201ENST00000516759 PITPNM1O00562 1244 aa4.9□□□□□ -1.63
RNU7-28P-201ENST00000516759 IFNLR1Q8IU57 520 aaPredicted RBP4.89□□□□□ -1.63
RNU7-28P-201ENST00000516759 VASPP50552 380 aaPredicted RBP4.88□□□□□ -1.63
RNU7-28P-201ENST00000516759 CLEC11AQ9Y240 323 aa4.86□□□□□ -1.63
RNU7-28P-201ENST00000516759 FBXO3Q9UK99 471 aa4.85□□□□□ -1.63
RNU7-28P-201ENST00000516759 SPDYE1Q8NFV5 336 aaPredicted RBP4.84□□□□□ -1.63
RNU7-28P-201ENST00000516759 RTN4Q9NQC3 1192 aaKnown RBP4.84□□□□□ -1.63
RNU7-28P-201ENST00000516759 CREBZFQ9NS37 354 aa4.84□□□□□ -1.63
RNU7-28P-201ENST00000516759 CHADLQ6NUI6 762 aa4.83□□□□□ -1.64
RNU7-28P-201ENST00000516759 MNX1P50219 401 aaPredicted RBP4.82□□□□□ -1.64
RNU7-28P-201ENST00000516759 STAG3Q9UJ98 1225 aa4.82□□□□□ -1.64
RNU7-28P-201ENST00000516759 MIER1Q8N108 512 aa4.81□□□□□ -1.64
RNU7-28P-201ENST00000516759 PRR29P0C7W0 189 aa4.8□□□□□ -1.64
RNU7-28P-201ENST00000516759 FXR2P51116 673 aaKnown RBP eCLIP4.8□□□□□ -1.64
RNU7-28P-201ENST00000516759 CHRDL2Q6WN34 429 aa4.78□□□□□ -1.64
RNU7-28P-201ENST00000516759 PLCD3Q8N3E9 789 aa4.78□□□□□ -1.64
RNU7-28P-201ENST00000516759 PIP4P2Q8N4L2 257 aa4.78□□□□□ -1.64
RNU7-28P-201ENST00000516759 NUBP1P53384 320 aa4.75□□□□□ -1.65
RNU7-28P-201ENST00000516759 PKD2Q13563 968 aa4.75□□□□□ -1.65
RNU7-28P-201ENST00000516759 KLHL34Q8N239 644 aa4.75□□□□□ -1.65
RNU7-28P-201ENST00000516759 PRKAR2AP13861 404 aaKnown RBP4.74□□□□□ -1.65
RNU7-28P-201ENST00000516759 RASEFQ8IZ41 740 aa4.73□□□□□ -1.65
RNU7-28P-201ENST00000516759 SPOCK2Q92563 424 aa4.73□□□□□ -1.65
RNU7-28P-201ENST00000516759 FARP1Q9Y4F1 1045 aaPredicted RBP4.72□□□□□ -1.65
RNU7-28P-201ENST00000516759 AMER1Q5JTC6 1135 aaPredicted RBP4.71□□□□□ -1.66
RNU7-28P-201ENST00000516759 EVX2Q03828 476 aa4.68□□□□□ -1.66
RNU7-28P-201ENST00000516759 RGL2O15211 777 aa4.66□□□□□ -1.66
RNU7-28P-201ENST00000516759 RNF25Q96BH1 459 aaPredicted RBP4.66□□□□□ -1.66
RNU7-28P-201ENST00000516759 CIZ1Q9ULV3 898 aaPredicted RBP4.66□□□□□ -1.66
RNU7-28P-201ENST00000516759 TSPYL2Q9H2G4 693 aaPredicted RBP4.65□□□□□ -1.67
RNU7-28P-201ENST00000516759 DCAF8Q5TAQ9 597 aa4.64□□□□□ -1.67
RNU7-28P-201ENST00000516759 PLEKHG5O94827 1062 aa4.63□□□□□ -1.67
RNU7-28P-201ENST00000516759 NPM1P06748 294 aaKnown RBP eCLIP4.63□□□□□ -1.67
RNU7-28P-201ENST00000516759 ZBTB47Q9UFB7 747 aaPredicted RBP4.63□□□□□ -1.67
RNU7-28P-201ENST00000516759 CCDC61Q9Y6R9 512 aa4.63□□□□□ -1.67
RNU7-28P-201ENST00000516759 C19orf67A6NJJ6 358 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms