RNA–Protein interactions for RNA: ENST00000516538.1

RNU6-1046P-201, Transcript of RNA, U6 small nuclear 1046, pseudogene, humanhuman

BASIC

Gene RNU6-1046P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1046P-201ENST00000516538 AEBP2Q6ZN18 517 aaPredicted RBP22.52■■□□□ 1.2
RNU6-1046P-201ENST00000516538 CHIC1Q5VXU3 224 aa21.25■□□□□ 0.99
RNU6-1046P-201ENST00000516538 SENP3Q9H4L4 574 aaPredicted RBP19.44■□□□□ 0.7
RNU6-1046P-201ENST00000516538 PHF23Q9BUL5 403 aaPredicted RBP19.06■□□□□ 0.64
RNU6-1046P-201ENST00000516538 FOXD1Q16676 465 aa18.04■□□□□ 0.48
RNU6-1046P-201ENST00000516538 MSH5O43196 834 aa17.14■□□□□ 0.33
RNU6-1046P-201ENST00000516538 POTEDQ86YR6 584 aa17.13■□□□□ 0.33
RNU6-1046P-201ENST00000516538 PLPPR3Q6T4P5 718 aa16.87■□□□□ 0.29
RNU6-1046P-201ENST00000516538 PIAS4Q8N2W9 510 aaPredicted RBP16.87■□□□□ 0.29
RNU6-1046P-201ENST00000516538 PPP6R1Q9UPN7 881 aa16.56■□□□□ 0.24
RNU6-1046P-201ENST00000516538 ADRA2BP18089 450 aa16.54■□□□□ 0.24
RNU6-1046P-201ENST00000516538 DMRT2Q9Y5R5 561 aa15.32■□□□□ 0.04
RNU6-1046P-201ENST00000516538 SCAF1Q9H7N4 1312 aaKnown RBP15.32■□□□□ 0.04
RNU6-1046P-201ENST00000516538 MAPK8IP2Q13387 824 aaPredicted RBP15.25■□□□□ 0.03
RNU6-1046P-201ENST00000516538 CACNB1Q02641 598 aaPredicted RBP14.87□□□□□ -0.03
RNU6-1046P-201ENST00000516538 DCAF8L1A6NGE4 600 aa14.78□□□□□ -0.04
RNU6-1046P-201ENST00000516538 PPP4R3CPQ6ZMV5 832 aa14.69□□□□□ -0.06
RNU6-1046P-201ENST00000516538 HOXD11P31277 338 aaPredicted RBP14.62□□□□□ -0.07
RNU6-1046P-201ENST00000516538 CNKSR2Q8WXI2 1034 aa14.53□□□□□ -0.08
RNU6-1046P-201ENST00000516538 RNF39Q9H2S5 420 aa14.5□□□□□ -0.09
RNU6-1046P-201ENST00000516538 RNF216Q9NWF9 866 aaPredicted RBP14.47□□□□□ -0.09
RNU6-1046P-201ENST00000516538 C1QBPQ07021 282 aaKnown RBP14.34□□□□□ -0.11
RNU6-1046P-201ENST00000516538 DNAJC5BQ9UF47 199 aa14.23□□□□□ -0.13
RNU6-1046P-201ENST00000516538 NCBP3Q53F19 620 aaKnown RBP14.15□□□□□ -0.14
RNU6-1046P-201ENST00000516538 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.01□□□□□ -0.17
RNU6-1046P-201ENST00000516538 NPM3O75607 178 aaKnown RBP13.8□□□□□ -0.2
RNU6-1046P-201ENST00000516538 U3KPZ7 1027 aaPredicted RBP13.59□□□□□ -0.23
RNU6-1046P-201ENST00000516538 CAPN15O75808 1086 aa13.56□□□□□ -0.24
RNU6-1046P-201ENST00000516538 DSG3P32926 999 aa13.47□□□□□ -0.25
RNU6-1046P-201ENST00000516538 SPINK5Q9NQ38 1064 aaPredicted RBP13.46□□□□□ -0.25
RNU6-1046P-201ENST00000516538 POTEHQ6S545 545 aa13.4□□□□□ -0.26
RNU6-1046P-201ENST00000516538 APLP2Q06481 763 aa13.39□□□□□ -0.27
RNU6-1046P-201ENST00000516538 ZNF219Q9P2Y4 722 aaPredicted RBP13.28□□□□□ -0.28
RNU6-1046P-201ENST00000516538 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.26□□□□□ -0.29
RNU6-1046P-201ENST00000516538 KCNA4P22459 653 aa13.26□□□□□ -0.29
RNU6-1046P-201ENST00000516538 HNRNPUL2Q1KMD3 747 aaKnown RBP13.26□□□□□ -0.29
RNU6-1046P-201ENST00000516538 TRHP20396 242 aaPredicted RBP13.25□□□□□ -0.29
RNU6-1046P-201ENST00000516538 SLC4A2P04920 1241 aa13.21□□□□□ -0.29
RNU6-1046P-201ENST00000516538 ABCB7O75027 752 aa13.16□□□□□ -0.3
RNU6-1046P-201ENST00000516538 SAMD1Q6SPF0 538 aaPredicted RBP13.14□□□□□ -0.31
RNU6-1046P-201ENST00000516538 RBM42Q9BTD8 480 aaKnown RBP13.01□□□□□ -0.33
RNU6-1046P-201ENST00000516538 MYCNP04198 464 aaPredicted RBP12.87□□□□□ -0.35
RNU6-1046P-201ENST00000516538 POLA2Q14181 598 aa12.79□□□□□ -0.36
RNU6-1046P-201ENST00000516538 CHRDL2Q6WN34 429 aa12.75□□□□□ -0.37
RNU6-1046P-201ENST00000516538 ZBTB12Q9Y330 459 aaPredicted RBP12.64□□□□□ -0.39
RNU6-1046P-201ENST00000516538 AKT1S1Q96B36 256 aa12.58□□□□□ -0.4
RNU6-1046P-201ENST00000516538 FOXD4L1Q9NU39 408 aa12.55□□□□□ -0.4
RNU6-1046P-201ENST00000516538 SLC4A1APQ9BWU0 796 aaKnown RBP12.53□□□□□ -0.4
RNU6-1046P-201ENST00000516538 SP7Q8TDD2 431 aaPredicted RBP12.43□□□□□ -0.42
RNU6-1046P-201ENST00000516538 ATF5Q9Y2D1 282 aaPredicted RBP12.43□□□□□ -0.42
RNU6-1046P-201ENST00000516538 REM2Q8IYK8 340 aaPredicted RBP12.41□□□□□ -0.42
RNU6-1046P-201ENST00000516538 OSCARQ8IYS5 282 aa12.4□□□□□ -0.42
RNU6-1046P-201ENST00000516538 PIP4P2Q8N4L2 257 aa12.34□□□□□ -0.43
RNU6-1046P-201ENST00000516538 PITPNM1O00562 1244 aa12.28□□□□□ -0.44
RNU6-1046P-201ENST00000516538 HAX1O00165 279 aa12.27□□□□□ -0.45
RNU6-1046P-201ENST00000516538 FXR2P51116 673 aaKnown RBP eCLIP12.22□□□□□ -0.45
RNU6-1046P-201ENST00000516538 ATXN8OSP0DMR3 200 aa12.21□□□□□ -0.45
RNU6-1046P-201ENST00000516538 FBLN2P98095 1184 aa12.19□□□□□ -0.46
RNU6-1046P-201ENST00000516538 SPDYE2BA6NHP3 402 aa12.16□□□□□ -0.46
RNU6-1046P-201ENST00000516538 SPDYE6P0CI01 402 aa12.16□□□□□ -0.46
RNU6-1046P-201ENST00000516538 SPDYE2Q495Y8 402 aa12.16□□□□□ -0.46
RNU6-1046P-201ENST00000516538 ZBTB22O15209 634 aa12.11□□□□□ -0.47
RNU6-1046P-201ENST00000516538 SPDYE1Q8NFV5 336 aaPredicted RBP12.05□□□□□ -0.48
RNU6-1046P-201ENST00000516538 CLEC11AQ9Y240 323 aa12.02□□□□□ -0.49
RNU6-1046P-201ENST00000516538 PRKAR2AP13861 404 aaKnown RBP11.99□□□□□ -0.49
RNU6-1046P-201ENST00000516538 ZNF692Q9BU19 519 aaPredicted RBP11.95□□□□□ -0.5
RNU6-1046P-201ENST00000516538 EVX2Q03828 476 aa11.92□□□□□ -0.5
RNU6-1046P-201ENST00000516538 SSUH2Q9Y2M2 353 aa11.9□□□□□ -0.5
RNU6-1046P-201ENST00000516538 MKRN4PQ13434 485 aaPredicted RBP11.86□□□□□ -0.51
RNU6-1046P-201ENST00000516538 C19orf67A6NJJ6 358 aa11.84□□□□□ -0.51
RNU6-1046P-201ENST00000516538 PRR29P0C7W0 189 aa11.78□□□□□ -0.52
RNU6-1046P-201ENST00000516538 GABBR2O75899 941 aa11.74□□□□□ -0.53
RNU6-1046P-201ENST00000516538 PABPN1Q86U42 306 aaKnown RBP eCLIP11.74□□□□□ -0.53
RNU6-1046P-201ENST00000516538 CHADLQ6NUI6 762 aa11.73□□□□□ -0.53
RNU6-1046P-201ENST00000516538 LHX8Q68G74 356 aa11.66□□□□□ -0.54
RNU6-1046P-201ENST00000516538 CD44P16070 742 aaKnown RBP11.61□□□□□ -0.55
RNU6-1046P-201ENST00000516538 CLCN6P51797 869 aa11.6□□□□□ -0.55
RNU6-1046P-201ENST00000516538 FARP1Q9Y4F1 1045 aaPredicted RBP11.57□□□□□ -0.56
RNU6-1046P-201ENST00000516538 DCBLD2Q96PD2 775 aa11.47□□□□□ -0.57
RNU6-1046P-201ENST00000516538 STAG3Q9UJ98 1225 aa11.44□□□□□ -0.58
RNU6-1046P-201ENST00000516538 POTEIP0CG38 1075 aa11.41□□□□□ -0.58
RNU6-1046P-201ENST00000516538 ZNF579Q8NAF0 562 aaKnown RBP11.4□□□□□ -0.58
RNU6-1046P-201ENST00000516538 ZRANB1Q9UGI0 708 aa11.4□□□□□ -0.58
RNU6-1046P-201ENST00000516538 PAK3O75914 559 aaPredicted RBP11.36□□□□□ -0.59
RNU6-1046P-201ENST00000516538 CSRNP3Q8WYN3 585 aa11.32□□□□□ -0.6
RNU6-1046P-201ENST00000516538 CREBZFQ9NS37 354 aa11.32□□□□□ -0.6
RNU6-1046P-201ENST00000516538 SPDYE4A6NLX3 237 aa11.26□□□□□ -0.61
RNU6-1046P-201ENST00000516538 NPM1P06748 294 aaKnown RBP eCLIP11.25□□□□□ -0.61
RNU6-1046P-201ENST00000516538 GALR2O43603 387 aaPredicted RBP11.24□□□□□ -0.61
RNU6-1046P-201ENST00000516538 PLSCR2Q9NRY7 297 aa11.2□□□□□ -0.62
RNU6-1046P-201ENST00000516538 PHF12Q96QT6 1004 aa11.16□□□□□ -0.62
RNU6-1046P-201ENST00000516538 OTUD5Q96G74 571 aa11.09□□□□□ -0.63
RNU6-1046P-201ENST00000516538 EHMT2Q96KQ7 1210 aa11.08□□□□□ -0.64
RNU6-1046P-201ENST00000516538 MNX1P50219 401 aaPredicted RBP11.04□□□□□ -0.64
RNU6-1046P-201ENST00000516538 SLC39A7Q92504 469 aa11.03□□□□□ -0.64
RNU6-1046P-201ENST00000516538 POTEB2H3BUK9 544 aa11.02□□□□□ -0.65
RNU6-1046P-201ENST00000516538 MS4A3Q96HJ5 214 aa11.02□□□□□ -0.65
RNU6-1046P-201ENST00000516538 METRNQ9UJH8 293 aa11.02□□□□□ -0.65
RNU6-1046P-201ENST00000516538 POTEMA6NI47 508 aa11□□□□□ -0.65
RNU6-1046P-201ENST00000516538 C7P10643 843 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms