RNA–Protein interactions for RNA: ENST00000516448.1

RN7SKP265-201, Transcript of RNA, 7SK small nuclear pseudogene 265, humanhuman

BASIC

Gene RN7SKP265, Length 223 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP265-201ENST00000516448 AEBP2Q6ZN18 517 aaPredicted RBP29.05■■■□□ 2.24
RN7SKP265-201ENST00000516448 CHIC1Q5VXU3 224 aa28.15■■■□□ 2.1
RN7SKP265-201ENST00000516448 PHF23Q9BUL5 403 aaPredicted RBP24.73■■□□□ 1.55
RN7SKP265-201ENST00000516448 SENP3Q9H4L4 574 aaPredicted RBP24.69■■□□□ 1.54
RN7SKP265-201ENST00000516448 FOXD1Q16676 465 aa22.94■■□□□ 1.26
RN7SKP265-201ENST00000516448 PLPPR3Q6T4P5 718 aa22.76■■□□□ 1.23
RN7SKP265-201ENST00000516448 PPP6R1Q9UPN7 881 aa21.9■■□□□ 1.1
RN7SKP265-201ENST00000516448 ADRA2BP18089 450 aa21.87■■□□□ 1.09
RN7SKP265-201ENST00000516448 PIAS4Q8N2W9 510 aaPredicted RBP21.59■■□□□ 1.05
RN7SKP265-201ENST00000516448 MSH5O43196 834 aa21.23■□□□□ 0.99
RN7SKP265-201ENST00000516448 PPP4R3CPQ6ZMV5 832 aa20.03■□□□□ 0.8
RN7SKP265-201ENST00000516448 SCAF1Q9H7N4 1312 aaKnown RBP20■□□□□ 0.79
RN7SKP265-201ENST00000516448 MAPK8IP2Q13387 824 aaPredicted RBP19.91■□□□□ 0.78
RN7SKP265-201ENST00000516448 POTEDQ86YR6 584 aa19.74■□□□□ 0.75
RN7SKP265-201ENST00000516448 DMRT2Q9Y5R5 561 aa19.67■□□□□ 0.74
RN7SKP265-201ENST00000516448 CNKSR2Q8WXI2 1034 aa19.51■□□□□ 0.71
RN7SKP265-201ENST00000516448 NCBP3Q53F19 620 aaKnown RBP19.44■□□□□ 0.7
RN7SKP265-201ENST00000516448 KCNA4P22459 653 aa19.33■□□□□ 0.68
RN7SKP265-201ENST00000516448 RNF216Q9NWF9 866 aaPredicted RBP19.18■□□□□ 0.66
RN7SKP265-201ENST00000516448 NPM3O75607 178 aaKnown RBP19.17■□□□□ 0.66
RN7SKP265-201ENST00000516448 HOXD11P31277 338 aaPredicted RBP19.17■□□□□ 0.66
RN7SKP265-201ENST00000516448 DCAF8L1A6NGE4 600 aa18.86■□□□□ 0.61
RN7SKP265-201ENST00000516448 DNAJC5BQ9UF47 199 aa18.6■□□□□ 0.57
RN7SKP265-201ENST00000516448 SLC4A1APQ9BWU0 796 aaKnown RBP18.36■□□□□ 0.53
RN7SKP265-201ENST00000516448 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.28■□□□□ 0.52
RN7SKP265-201ENST00000516448 RNF39Q9H2S5 420 aa18.17■□□□□ 0.5
RN7SKP265-201ENST00000516448 SLC4A2P04920 1241 aa18.15■□□□□ 0.5
RN7SKP265-201ENST00000516448 U3KPZ7 1027 aaPredicted RBP17.96■□□□□ 0.47
RN7SKP265-201ENST00000516448 C1QBPQ07021 282 aaKnown RBP17.94■□□□□ 0.46
RN7SKP265-201ENST00000516448 CACNB1Q02641 598 aaPredicted RBP17.88■□□□□ 0.45
RN7SKP265-201ENST00000516448 FOXD4L1Q9NU39 408 aa17.85■□□□□ 0.45
RN7SKP265-201ENST00000516448 ZBTB22O15209 634 aa17.77■□□□□ 0.44
RN7SKP265-201ENST00000516448 MYCNP04198 464 aaPredicted RBP17.71■□□□□ 0.43
RN7SKP265-201ENST00000516448 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.64■□□□□ 0.41
RN7SKP265-201ENST00000516448 HNRNPUL2Q1KMD3 747 aaKnown RBP17.64■□□□□ 0.41
RN7SKP265-201ENST00000516448 EHMT2Q96KQ7 1210 aa17.6■□□□□ 0.41
RN7SKP265-201ENST00000516448 SAMD1Q6SPF0 538 aaPredicted RBP17.58■□□□□ 0.4
RN7SKP265-201ENST00000516448 SPINK5Q9NQ38 1064 aaPredicted RBP17.53■□□□□ 0.4
RN7SKP265-201ENST00000516448 APLP2Q06481 763 aa17.51■□□□□ 0.39
RN7SKP265-201ENST00000516448 CSRNP3Q8WYN3 585 aa17.49■□□□□ 0.39
RN7SKP265-201ENST00000516448 CAPN15O75808 1086 aa17.48■□□□□ 0.39
RN7SKP265-201ENST00000516448 TRHP20396 242 aaPredicted RBP17.34■□□□□ 0.37
RN7SKP265-201ENST00000516448 ZNF219Q9P2Y4 722 aaPredicted RBP17.32■□□□□ 0.36
RN7SKP265-201ENST00000516448 ATF5Q9Y2D1 282 aaPredicted RBP17.26■□□□□ 0.35
RN7SKP265-201ENST00000516448 ATXN8OSP0DMR3 200 aa17.22■□□□□ 0.35
RN7SKP265-201ENST00000516448 DSG3P32926 999 aa17.22■□□□□ 0.35
RN7SKP265-201ENST00000516448 ABCB7O75027 752 aa17.13■□□□□ 0.33
RN7SKP265-201ENST00000516448 POLA2Q14181 598 aa16.99■□□□□ 0.31
RN7SKP265-201ENST00000516448 ZBTB12Q9Y330 459 aaPredicted RBP16.69■□□□□ 0.26
RN7SKP265-201ENST00000516448 FBLN2P98095 1184 aa16.55■□□□□ 0.24
RN7SKP265-201ENST00000516448 MKRN4PQ13434 485 aaPredicted RBP16.49■□□□□ 0.23
RN7SKP265-201ENST00000516448 OSCARQ8IYS5 282 aa16.45■□□□□ 0.22
RN7SKP265-201ENST00000516448 RBM42Q9BTD8 480 aaKnown RBP16.42■□□□□ 0.22
RN7SKP265-201ENST00000516448 SPDYE2BA6NHP3 402 aa16.23■□□□□ 0.19
RN7SKP265-201ENST00000516448 SPDYE6P0CI01 402 aa16.23■□□□□ 0.19
RN7SKP265-201ENST00000516448 SPDYE2Q495Y8 402 aa16.23■□□□□ 0.19
RN7SKP265-201ENST00000516448 AKT1S1Q96B36 256 aa16.17■□□□□ 0.18
RN7SKP265-201ENST00000516448 ZNF692Q9BU19 519 aaPredicted RBP16.14■□□□□ 0.17
RN7SKP265-201ENST00000516448 SSUH2Q9Y2M2 353 aa16.08■□□□□ 0.16
RN7SKP265-201ENST00000516448 SPDYE4A6NLX3 237 aa16.02■□□□□ 0.16
RN7SKP265-201ENST00000516448 REM2Q8IYK8 340 aaPredicted RBP16.01■□□□□ 0.15
RN7SKP265-201ENST00000516448 PABPN1Q86U42 306 aaKnown RBP eCLIP15.92■□□□□ 0.14
RN7SKP265-201ENST00000516448 PITPNM1O00562 1244 aa15.84■□□□□ 0.13
RN7SKP265-201ENST00000516448 FKBP8Q14318 412 aa15.84■□□□□ 0.13
RN7SKP265-201ENST00000516448 CHRDL2Q6WN34 429 aa15.82■□□□□ 0.12
RN7SKP265-201ENST00000516448 SPDYE1Q8NFV5 336 aaPredicted RBP15.82■□□□□ 0.12
RN7SKP265-201ENST00000516448 CLEC11AQ9Y240 323 aa15.77■□□□□ 0.12
RN7SKP265-201ENST00000516448 PROM2Q8N271 834 aa15.71■□□□□ 0.11
RN7SKP265-201ENST00000516448 STAG3Q9UJ98 1225 aa15.6■□□□□ 0.09
RN7SKP265-201ENST00000516448 PRR29P0C7W0 189 aa15.58■□□□□ 0.08
RN7SKP265-201ENST00000516448 FXR2P51116 673 aaKnown RBP eCLIP15.58■□□□□ 0.08
RN7SKP265-201ENST00000516448 POTEHQ6S545 545 aa15.58■□□□□ 0.08
RN7SKP265-201ENST00000516448 PIP4P2Q8N4L2 257 aa15.58■□□□□ 0.08
RN7SKP265-201ENST00000516448 PRKAR2AP13861 404 aaKnown RBP15.44■□□□□ 0.06
RN7SKP265-201ENST00000516448 CHADLQ6NUI6 762 aa15.41■□□□□ 0.06
RN7SKP265-201ENST00000516448 CREBZFQ9NS37 354 aa15.33■□□□□ 0.04
RN7SKP265-201ENST00000516448 FBXO3Q9UK99 471 aa15.32■□□□□ 0.04
RN7SKP265-201ENST00000516448 FARP1Q9Y4F1 1045 aaPredicted RBP15.22■□□□□ 0.03
RN7SKP265-201ENST00000516448 MIER1Q8N108 512 aa15.21■□□□□ 0.03
RN7SKP265-201ENST00000516448 PLCD3Q8N3E9 789 aa15.18■□□□□ 0.02
RN7SKP265-201ENST00000516448 PLEKHG5O94827 1062 aa15.16■□□□□ 0.02
RN7SKP265-201ENST00000516448 HAX1O00165 279 aa15.15■□□□□ 0.02
RN7SKP265-201ENST00000516448 MNX1P50219 401 aaPredicted RBP15.13■□□□□ 0.01
RN7SKP265-201ENST00000516448 VASPP50552 380 aaPredicted RBP15.12■□□□□ 0.01
RN7SKP265-201ENST00000516448 NPM1P06748 294 aaKnown RBP eCLIP15.06■□□□□ 0
RN7SKP265-201ENST00000516448 C19orf67A6NJJ6 358 aa15.05■□□□□ -0
RN7SKP265-201ENST00000516448 ZBTB47Q9UFB7 747 aaPredicted RBP15.01□□□□□ -0.01
RN7SKP265-201ENST00000516448 EVX2Q03828 476 aa15□□□□□ -0.01
RN7SKP265-201ENST00000516448 CD44P16070 742 aaKnown RBP14.99□□□□□ -0.01
RN7SKP265-201ENST00000516448 KLHL34Q8N239 644 aa14.92□□□□□ -0.02
RN7SKP265-201ENST00000516448 IFNLR1Q8IU57 520 aaPredicted RBP14.9□□□□□ -0.02
RN7SKP265-201ENST00000516448 SP7Q8TDD2 431 aaPredicted RBP14.89□□□□□ -0.03
RN7SKP265-201ENST00000516448 PAK3O75914 559 aaPredicted RBP14.88□□□□□ -0.03
RN7SKP265-201ENST00000516448 ZRANB1Q9UGI0 708 aa14.88□□□□□ -0.03
RN7SKP265-201ENST00000516448 NUBP1P53384 320 aa14.85□□□□□ -0.03
RN7SKP265-201ENST00000516448 RASEFQ8IZ41 740 aa14.84□□□□□ -0.03
RN7SKP265-201ENST00000516448 TSPYL2Q9H2G4 693 aaPredicted RBP14.83□□□□□ -0.04
RN7SKP265-201ENST00000516448 ZNF579Q8NAF0 562 aaKnown RBP14.78□□□□□ -0.04
RN7SKP265-201ENST00000516448 SPOCK2Q92563 424 aa14.76□□□□□ -0.05
RN7SKP265-201ENST00000516448 FAM212AQ96EL1 285 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms