RNA–Protein interactions for RNA: ENST00000516414.1

RNU6-1049P-201, Transcript of RNA, U6 small nuclear 1049, pseudogene, humanhuman

BASIC

Gene RNU6-1049P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1049P-201ENST00000516414 AEBP2Q6ZN18 517 aaPredicted RBP3.37□□□□□ -1.87
RNU6-1049P-201ENST00000516414 CHIC1Q5VXU3 224 aa3□□□□□ -1.93
RNU6-1049P-201ENST00000516414 PHF23Q9BUL5 403 aaPredicted RBP2.81□□□□□ -1.96
RNU6-1049P-201ENST00000516414 FOXD1Q16676 465 aa2.61□□□□□ -1.99
RNU6-1049P-201ENST00000516414 SENP3Q9H4L4 574 aaPredicted RBP2.57□□□□□ -2
RNU6-1049P-201ENST00000516414 PPP6R1Q9UPN7 881 aa2.57□□□□□ -2
RNU6-1049P-201ENST00000516414 ADRA2BP18089 450 aa2.52□□□□□ -2.01
RNU6-1049P-201ENST00000516414 MAPK8IP2Q13387 824 aaPredicted RBP2.39□□□□□ -2.03
RNU6-1049P-201ENST00000516414 POTEDQ86YR6 584 aa2.38□□□□□ -2.03
RNU6-1049P-201ENST00000516414 PIAS4Q8N2W9 510 aaPredicted RBP2.35□□□□□ -2.03
RNU6-1049P-201ENST00000516414 PLPPR3Q6T4P5 718 aa2.29□□□□□ -2.04
RNU6-1049P-201ENST00000516414 MSH5O43196 834 aa2.19□□□□□ -2.06
RNU6-1049P-201ENST00000516414 PPP4R3CPQ6ZMV5 832 aa2.13□□□□□ -2.07
RNU6-1049P-201ENST00000516414 DCAF8L1A6NGE4 600 aa2.11□□□□□ -2.07
RNU6-1049P-201ENST00000516414 DMRT2Q9Y5R5 561 aa2.1□□□□□ -2.07
RNU6-1049P-201ENST00000516414 KCNA4P22459 653 aa2.08□□□□□ -2.08
RNU6-1049P-201ENST00000516414 NPM3O75607 178 aaKnown RBP2.05□□□□□ -2.08
RNU6-1049P-201ENST00000516414 SPINK5Q9NQ38 1064 aaPredicted RBP2.03□□□□□ -2.08
RNU6-1049P-201ENST00000516414 SLC4A2P04920 1241 aa2.02□□□□□ -2.09
RNU6-1049P-201ENST00000516414 CACNB1Q02641 598 aaPredicted RBP2.02□□□□□ -2.09
RNU6-1049P-201ENST00000516414 HOXD11P31277 338 aaPredicted RBP2.01□□□□□ -2.09
RNU6-1049P-201ENST00000516414 ATF5Q9Y2D1 282 aaPredicted RBP2.01□□□□□ -2.09
RNU6-1049P-201ENST00000516414 RNF39Q9H2S5 420 aa2□□□□□ -2.09
RNU6-1049P-201ENST00000516414 ZBTB22O15209 634 aa1.99□□□□□ -2.09
RNU6-1049P-201ENST00000516414 ABCB7O75027 752 aa1.98□□□□□ -2.09
RNU6-1049P-201ENST00000516414 CNKSR2Q8WXI2 1034 aa1.98□□□□□ -2.09
RNU6-1049P-201ENST00000516414 U3KPZ7 1027 aaPredicted RBP1.97□□□□□ -2.09
RNU6-1049P-201ENST00000516414 RNF216Q9NWF9 866 aaPredicted RBP1.96□□□□□ -2.1
RNU6-1049P-201ENST00000516414 SCAF1Q9H7N4 1312 aaKnown RBP1.94□□□□□ -2.1
RNU6-1049P-201ENST00000516414 GRWD1Q9BQ67 446 aaKnown RBP eCLIP1.94□□□□□ -2.1
RNU6-1049P-201ENST00000516414 TRHP20396 242 aaPredicted RBP1.92□□□□□ -2.1
RNU6-1049P-201ENST00000516414 DSG3P32926 999 aa1.91□□□□□ -2.1
RNU6-1049P-201ENST00000516414 CAPN15O75808 1086 aa1.9□□□□□ -2.11
RNU6-1049P-201ENST00000516414 EVX2Q03828 476 aa1.89□□□□□ -2.11
RNU6-1049P-201ENST00000516414 POLA2Q14181 598 aa1.86□□□□□ -2.11
RNU6-1049P-201ENST00000516414 C1QBPQ07021 282 aaKnown RBP1.85□□□□□ -2.11
RNU6-1049P-201ENST00000516414 MKRN4PQ13434 485 aaPredicted RBP1.85□□□□□ -2.11
RNU6-1049P-201ENST00000516414 NCBP3Q53F19 620 aaKnown RBP1.85□□□□□ -2.11
RNU6-1049P-201ENST00000516414 SLC4A1APQ9BWU0 796 aaKnown RBP1.84□□□□□ -2.11
RNU6-1049P-201ENST00000516414 CSRNP3Q8WYN3 585 aa1.83□□□□□ -2.12
RNU6-1049P-201ENST00000516414 EHMT2Q96KQ7 1210 aa1.82□□□□□ -2.12
RNU6-1049P-201ENST00000516414 POTEHQ6S545 545 aa1.81□□□□□ -2.12
RNU6-1049P-201ENST00000516414 OSCARQ8IYS5 282 aa1.81□□□□□ -2.12
RNU6-1049P-201ENST00000516414 CHADLQ6NUI6 762 aa1.8□□□□□ -2.12
RNU6-1049P-201ENST00000516414 ZNF219Q9P2Y4 722 aaPredicted RBP1.79□□□□□ -2.12
RNU6-1049P-201ENST00000516414 PITPNM1O00562 1244 aa1.76□□□□□ -2.13
RNU6-1049P-201ENST00000516414 FOXD4L1Q9NU39 408 aa1.76□□□□□ -2.13
RNU6-1049P-201ENST00000516414 REM2Q8IYK8 340 aaPredicted RBP1.75□□□□□ -2.13
RNU6-1049P-201ENST00000516414 PIP4P2Q8N4L2 257 aa1.75□□□□□ -2.13
RNU6-1049P-201ENST00000516414 POTEIP0CG38 1075 aa1.74□□□□□ -2.13
RNU6-1049P-201ENST00000516414 CHRDL2Q6WN34 429 aa1.74□□□□□ -2.13
RNU6-1049P-201ENST00000516414 DNAJC5BQ9UF47 199 aa1.74□□□□□ -2.13
RNU6-1049P-201ENST00000516414 MYCNP04198 464 aaPredicted RBP1.73□□□□□ -2.13
RNU6-1049P-201ENST00000516414 CLEC11AQ9Y240 323 aa1.73□□□□□ -2.13
RNU6-1049P-201ENST00000516414 POTEB2H3BUK9 544 aa1.72□□□□□ -2.13
RNU6-1049P-201ENST00000516414 TRPC6Q9Y210 931 aa1.72□□□□□ -2.13
RNU6-1049P-201ENST00000516414 PELP1Q8IZL8 1130 aaKnown RBP1.71□□□□□ -2.14
RNU6-1049P-201ENST00000516414 HAX1O00165 279 aa1.7□□□□□ -2.14
RNU6-1049P-201ENST00000516414 POTEJP0CG39 1038 aa1.7□□□□□ -2.14
RNU6-1049P-201ENST00000516414 PRKAR2AP13861 404 aaKnown RBP1.69□□□□□ -2.14
RNU6-1049P-201ENST00000516414 FXR2P51116 673 aaKnown RBP eCLIP1.69□□□□□ -2.14
RNU6-1049P-201ENST00000516414 PABPN1Q86U42 306 aaKnown RBP eCLIP1.69□□□□□ -2.14
RNU6-1049P-201ENST00000516414 SAMD1Q6SPF0 538 aaPredicted RBP1.68□□□□□ -2.14
RNU6-1049P-201ENST00000516414 ZNF692Q9BU19 519 aaPredicted RBP1.68□□□□□ -2.14
RNU6-1049P-201ENST00000516414 GABBR2O75899 941 aa1.67□□□□□ -2.14
RNU6-1049P-201ENST00000516414 PHF12Q96QT6 1004 aa1.67□□□□□ -2.14
RNU6-1049P-201ENST00000516414 CREBZFQ9NS37 354 aa1.67□□□□□ -2.14
RNU6-1049P-201ENST00000516414 POTEFA5A3E0 1075 aa1.66□□□□□ -2.14
RNU6-1049P-201ENST00000516414 GALR2O43603 387 aaPredicted RBP1.66□□□□□ -2.14
RNU6-1049P-201ENST00000516414 SP7Q8TDD2 431 aaPredicted RBP1.66□□□□□ -2.14
RNU6-1049P-201ENST00000516414 MNX1P50219 401 aaPredicted RBP1.65□□□□□ -2.15
RNU6-1049P-201ENST00000516414 AKT1S1Q96B36 256 aa1.65□□□□□ -2.15
RNU6-1049P-201ENST00000516414 SSUH2Q9Y2M2 353 aa1.65□□□□□ -2.15
RNU6-1049P-201ENST00000516414 C19orf67A6NJJ6 358 aa1.64□□□□□ -2.15
RNU6-1049P-201ENST00000516414 TSPYL2Q9H2G4 693 aaPredicted RBP1.63□□□□□ -2.15
RNU6-1049P-201ENST00000516414 FARP1Q9Y4F1 1045 aaPredicted RBP1.63□□□□□ -2.15
RNU6-1049P-201ENST00000516414 SPDYE4A6NLX3 237 aa1.62□□□□□ -2.15
RNU6-1049P-201ENST00000516414 PRR29P0C7W0 189 aa1.62□□□□□ -2.15
RNU6-1049P-201ENST00000516414 LCE2DQ5TA82 110 aaPredicted RBP1.62□□□□□ -2.15
RNU6-1049P-201ENST00000516414 RASEFQ8IZ41 740 aa1.62□□□□□ -2.15
RNU6-1049P-201ENST00000516414 OTUD5Q96G74 571 aa1.62□□□□□ -2.15
RNU6-1049P-201ENST00000516414 COLQQ9Y215 455 aaPredicted RBP1.62□□□□□ -2.15
RNU6-1049P-201ENST00000516414 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP1.61□□□□□ -2.15
RNU6-1049P-201ENST00000516414 CD44P16070 742 aaKnown RBP1.61□□□□□ -2.15
RNU6-1049P-201ENST00000516414 FKBP8Q14318 412 aa1.61□□□□□ -2.15
RNU6-1049P-201ENST00000516414 HNRNPUL2Q1KMD3 747 aaKnown RBP1.61□□□□□ -2.15
RNU6-1049P-201ENST00000516414 ZRANB1Q9UGI0 708 aa1.61□□□□□ -2.15
RNU6-1049P-201ENST00000516414 MAP3K13O43283 966 aa1.6□□□□□ -2.15
RNU6-1049P-201ENST00000516414 ATN1P54259 1190 aaPredicted RBP1.6□□□□□ -2.15
RNU6-1049P-201ENST00000516414 DPY19L2Q6NUT2 758 aa1.6□□□□□ -2.15
RNU6-1049P-201ENST00000516414 MS4A3Q96HJ5 214 aa1.6□□□□□ -2.15
RNU6-1049P-201ENST00000516414 POTEB3A0JP26 581 aa1.59□□□□□ -2.15
RNU6-1049P-201ENST00000516414 SPDYE2BA6NHP3 402 aa1.59□□□□□ -2.15
RNU6-1049P-201ENST00000516414 SPDYE6P0CI01 402 aa1.59□□□□□ -2.15
RNU6-1049P-201ENST00000516414 ATXN8OSP0DMR3 200 aa1.59□□□□□ -2.15
RNU6-1049P-201ENST00000516414 FBLN2P98095 1184 aa1.59□□□□□ -2.15
RNU6-1049P-201ENST00000516414 SPDYE2Q495Y8 402 aa1.59□□□□□ -2.15
RNU6-1049P-201ENST00000516414 LHX8Q68G74 356 aa1.59□□□□□ -2.15
RNU6-1049P-201ENST00000516414 POTEBQ6S5H4 581 aa1.59□□□□□ -2.15
RNU6-1049P-201ENST00000516414 RBM42Q9BTD8 480 aaKnown RBP1.59□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms