RNA–Protein interactions for RNA: ENST00000516374.1

RNU6-948P-201, Transcript of RNA, U6 small nuclear 948, pseudogene, humanhuman

BASIC

Gene RNU6-948P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-948P-201ENST00000516374 AEBP2Q6ZN18 517 aaPredicted RBP10.29□□□□□ -0.76
RNU6-948P-201ENST00000516374 CHIC1Q5VXU3 224 aa10.11□□□□□ -0.79
RNU6-948P-201ENST00000516374 PHF23Q9BUL5 403 aaPredicted RBP8.97□□□□□ -0.97
RNU6-948P-201ENST00000516374 SENP3Q9H4L4 574 aaPredicted RBP8.61□□□□□ -1.03
RNU6-948P-201ENST00000516374 PLPPR3Q6T4P5 718 aa8.22□□□□□ -1.09
RNU6-948P-201ENST00000516374 FOXD1Q16676 465 aa8.05□□□□□ -1.12
RNU6-948P-201ENST00000516374 POTEDQ86YR6 584 aa7.94□□□□□ -1.14
RNU6-948P-201ENST00000516374 PPP6R1Q9UPN7 881 aa7.89□□□□□ -1.15
RNU6-948P-201ENST00000516374 ADRA2BP18089 450 aa7.85□□□□□ -1.15
RNU6-948P-201ENST00000516374 PIAS4Q8N2W9 510 aaPredicted RBP7.55□□□□□ -1.2
RNU6-948P-201ENST00000516374 MSH5O43196 834 aa7.29□□□□□ -1.24
RNU6-948P-201ENST00000516374 PPP4R3CPQ6ZMV5 832 aa7.29□□□□□ -1.24
RNU6-948P-201ENST00000516374 KCNA4P22459 653 aa7.28□□□□□ -1.24
RNU6-948P-201ENST00000516374 MAPK8IP2Q13387 824 aaPredicted RBP7.12□□□□□ -1.27
RNU6-948P-201ENST00000516374 SCAF1Q9H7N4 1312 aaKnown RBP7.09□□□□□ -1.27
RNU6-948P-201ENST00000516374 NCBP3Q53F19 620 aaKnown RBP7.08□□□□□ -1.28
RNU6-948P-201ENST00000516374 CNKSR2Q8WXI2 1034 aa7.05□□□□□ -1.28
RNU6-948P-201ENST00000516374 NPM3O75607 178 aaKnown RBP7.04□□□□□ -1.28
RNU6-948P-201ENST00000516374 DMRT2Q9Y5R5 561 aa6.92□□□□□ -1.3
RNU6-948P-201ENST00000516374 SLC4A1APQ9BWU0 796 aaKnown RBP6.91□□□□□ -1.3
RNU6-948P-201ENST00000516374 RNF216Q9NWF9 866 aaPredicted RBP6.88□□□□□ -1.31
RNU6-948P-201ENST00000516374 HOXD11P31277 338 aaPredicted RBP6.85□□□□□ -1.31
RNU6-948P-201ENST00000516374 EHMT2Q96KQ7 1210 aa6.84□□□□□ -1.31
RNU6-948P-201ENST00000516374 DNAJC5BQ9UF47 199 aa6.83□□□□□ -1.32
RNU6-948P-201ENST00000516374 CSRNP3Q8WYN3 585 aa6.78□□□□□ -1.32
RNU6-948P-201ENST00000516374 ZBTB22O15209 634 aa6.73□□□□□ -1.33
RNU6-948P-201ENST00000516374 SLC4A2P04920 1241 aa6.66□□□□□ -1.34
RNU6-948P-201ENST00000516374 FOXD4L1Q9NU39 408 aa6.61□□□□□ -1.35
RNU6-948P-201ENST00000516374 DCAF8L1A6NGE4 600 aa6.57□□□□□ -1.36
RNU6-948P-201ENST00000516374 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.47□□□□□ -1.37
RNU6-948P-201ENST00000516374 MYCNP04198 464 aaPredicted RBP6.45□□□□□ -1.38
RNU6-948P-201ENST00000516374 U3KPZ7 1027 aaPredicted RBP6.42□□□□□ -1.38
RNU6-948P-201ENST00000516374 ATXN8OSP0DMR3 200 aa6.38□□□□□ -1.39
RNU6-948P-201ENST00000516374 ATF5Q9Y2D1 282 aaPredicted RBP6.37□□□□□ -1.39
RNU6-948P-201ENST00000516374 RNF39Q9H2S5 420 aa6.31□□□□□ -1.4
RNU6-948P-201ENST00000516374 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.3□□□□□ -1.4
RNU6-948P-201ENST00000516374 HNRNPUL2Q1KMD3 747 aaKnown RBP6.3□□□□□ -1.4
RNU6-948P-201ENST00000516374 SAMD1Q6SPF0 538 aaPredicted RBP6.3□□□□□ -1.4
RNU6-948P-201ENST00000516374 SPINK5Q9NQ38 1064 aaPredicted RBP6.22□□□□□ -1.41
RNU6-948P-201ENST00000516374 C1QBPQ07021 282 aaKnown RBP6.21□□□□□ -1.42
RNU6-948P-201ENST00000516374 ZNF219Q9P2Y4 722 aaPredicted RBP6.2□□□□□ -1.42
RNU6-948P-201ENST00000516374 APLP2Q06481 763 aa6.18□□□□□ -1.42
RNU6-948P-201ENST00000516374 TRHP20396 242 aaPredicted RBP6.15□□□□□ -1.42
RNU6-948P-201ENST00000516374 CAPN15O75808 1086 aa6.13□□□□□ -1.43
RNU6-948P-201ENST00000516374 POLA2Q14181 598 aa6.11□□□□□ -1.43
RNU6-948P-201ENST00000516374 MKRN4PQ13434 485 aaPredicted RBP6.08□□□□□ -1.44
RNU6-948P-201ENST00000516374 ABCB7O75027 752 aa6.06□□□□□ -1.44
RNU6-948P-201ENST00000516374 FKBP8Q14318 412 aa6.06□□□□□ -1.44
RNU6-948P-201ENST00000516374 DSG3P32926 999 aa6.05□□□□□ -1.44
RNU6-948P-201ENST00000516374 CACNB1Q02641 598 aaPredicted RBP6.05□□□□□ -1.44
RNU6-948P-201ENST00000516374 POTEHQ6S545 545 aa5.99□□□□□ -1.45
RNU6-948P-201ENST00000516374 FBLN2P98095 1184 aa5.97□□□□□ -1.45
RNU6-948P-201ENST00000516374 SPDYE4A6NLX3 237 aa5.95□□□□□ -1.46
RNU6-948P-201ENST00000516374 ZBTB12Q9Y330 459 aaPredicted RBP5.93□□□□□ -1.46
RNU6-948P-201ENST00000516374 PROM2Q8N271 834 aa5.9□□□□□ -1.46
RNU6-948P-201ENST00000516374 OSCARQ8IYS5 282 aa5.86□□□□□ -1.47
RNU6-948P-201ENST00000516374 ZNF692Q9BU19 519 aaPredicted RBP5.84□□□□□ -1.47
RNU6-948P-201ENST00000516374 SPDYE2BA6NHP3 402 aa5.82□□□□□ -1.48
RNU6-948P-201ENST00000516374 SPDYE6P0CI01 402 aa5.82□□□□□ -1.48
RNU6-948P-201ENST00000516374 SPDYE2Q495Y8 402 aa5.82□□□□□ -1.48
RNU6-948P-201ENST00000516374 SSUH2Q9Y2M2 353 aa5.82□□□□□ -1.48
RNU6-948P-201ENST00000516374 FBXO3Q9UK99 471 aa5.78□□□□□ -1.48
RNU6-948P-201ENST00000516374 PABPN1Q86U42 306 aaKnown RBP eCLIP5.76□□□□□ -1.49
RNU6-948P-201ENST00000516374 RTN4Q9NQC3 1192 aaKnown RBP5.75□□□□□ -1.49
RNU6-948P-201ENST00000516374 VASPP50552 380 aaPredicted RBP5.72□□□□□ -1.49
RNU6-948P-201ENST00000516374 IFNLR1Q8IU57 520 aaPredicted RBP5.71□□□□□ -1.5
RNU6-948P-201ENST00000516374 AMER1Q5JTC6 1135 aaPredicted RBP5.69□□□□□ -1.5
RNU6-948P-201ENST00000516374 AKT1S1Q96B36 256 aa5.68□□□□□ -1.5
RNU6-948P-201ENST00000516374 STAG3Q9UJ98 1225 aa5.68□□□□□ -1.5
RNU6-948P-201ENST00000516374 RBM42Q9BTD8 480 aaKnown RBP5.67□□□□□ -1.5
RNU6-948P-201ENST00000516374 REM2Q8IYK8 340 aaPredicted RBP5.66□□□□□ -1.5
RNU6-948P-201ENST00000516374 MIER1Q8N108 512 aa5.63□□□□□ -1.51
RNU6-948P-201ENST00000516374 SPDYE1Q8NFV5 336 aaPredicted RBP5.61□□□□□ -1.51
RNU6-948P-201ENST00000516374 PLCD3Q8N3E9 789 aa5.6□□□□□ -1.51
RNU6-948P-201ENST00000516374 KLHL34Q8N239 644 aa5.59□□□□□ -1.51
RNU6-948P-201ENST00000516374 CLEC11AQ9Y240 323 aa5.59□□□□□ -1.51
RNU6-948P-201ENST00000516374 PITPNM1O00562 1244 aa5.58□□□□□ -1.52
RNU6-948P-201ENST00000516374 PRR29P0C7W0 189 aa5.57□□□□□ -1.52
RNU6-948P-201ENST00000516374 PKD2Q13563 968 aa5.57□□□□□ -1.52
RNU6-948P-201ENST00000516374 SPOCK2Q92563 424 aa5.57□□□□□ -1.52
RNU6-948P-201ENST00000516374 CREBZFQ9NS37 354 aa5.56□□□□□ -1.52
RNU6-948P-201ENST00000516374 MNX1P50219 401 aaPredicted RBP5.55□□□□□ -1.52
RNU6-948P-201ENST00000516374 PLEKHG5O94827 1062 aa5.5□□□□□ -1.53
RNU6-948P-201ENST00000516374 NUBP1P53384 320 aa5.5□□□□□ -1.53
RNU6-948P-201ENST00000516374 ZBTB47Q9UFB7 747 aaPredicted RBP5.49□□□□□ -1.53
RNU6-948P-201ENST00000516374 CHADLQ6NUI6 762 aa5.48□□□□□ -1.53
RNU6-948P-201ENST00000516374 FXR2P51116 673 aaKnown RBP eCLIP5.47□□□□□ -1.53
RNU6-948P-201ENST00000516374 ECM2O94769 699 aaPredicted RBP5.45□□□□□ -1.54
RNU6-948P-201ENST00000516374 CHRDL2Q6WN34 429 aa5.45□□□□□ -1.54
RNU6-948P-201ENST00000516374 CIZ1Q9ULV3 898 aaPredicted RBP5.45□□□□□ -1.54
RNU6-948P-201ENST00000516374 RGL2O15211 777 aa5.44□□□□□ -1.54
RNU6-948P-201ENST00000516374 RASEFQ8IZ41 740 aa5.44□□□□□ -1.54
RNU6-948P-201ENST00000516374 PRKAR2AP13861 404 aaKnown RBP5.43□□□□□ -1.54
RNU6-948P-201ENST00000516374 DCAF8Q5TAQ9 597 aa5.43□□□□□ -1.54
RNU6-948P-201ENST00000516374 PIP4P2Q8N4L2 257 aa5.43□□□□□ -1.54
RNU6-948P-201ENST00000516374 FARP1Q9Y4F1 1045 aaPredicted RBP5.43□□□□□ -1.54
RNU6-948P-201ENST00000516374 NPM1P06748 294 aaKnown RBP eCLIP5.41□□□□□ -1.54
RNU6-948P-201ENST00000516374 GSE1Q14687 1217 aa5.41□□□□□ -1.54
RNU6-948P-201ENST00000516374 CHRM1P11229 460 aaPredicted RBP5.39□□□□□ -1.55
RNU6-948P-201ENST00000516374 RNF25Q96BH1 459 aaPredicted RBP5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms