RNA–Protein interactions for RNA: ENST00000516288.1

RNU6-346P-201, Transcript of RNA, U6 small nuclear 346, pseudogene, humanhuman

BASIC

Gene RNU6-346P, Length 111 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-346P-201ENST00000516288 AEBP2Q6ZN18 517 aaPredicted RBP18.39■□□□□ 0.53
RNU6-346P-201ENST00000516288 CHIC1Q5VXU3 224 aa17.39■□□□□ 0.37
RNU6-346P-201ENST00000516288 SENP3Q9H4L4 574 aaPredicted RBP15.96■□□□□ 0.15
RNU6-346P-201ENST00000516288 PHF23Q9BUL5 403 aaPredicted RBP15.6■□□□□ 0.09
RNU6-346P-201ENST00000516288 POTEDQ86YR6 584 aa15□□□□□ -0.01
RNU6-346P-201ENST00000516288 FOXD1Q16676 465 aa14.82□□□□□ -0.04
RNU6-346P-201ENST00000516288 MSH5O43196 834 aa14.23□□□□□ -0.13
RNU6-346P-201ENST00000516288 PIAS4Q8N2W9 510 aaPredicted RBP13.78□□□□□ -0.2
RNU6-346P-201ENST00000516288 PLPPR3Q6T4P5 718 aa13.45□□□□□ -0.26
RNU6-346P-201ENST00000516288 PPP6R1Q9UPN7 881 aa13.37□□□□□ -0.27
RNU6-346P-201ENST00000516288 ADRA2BP18089 450 aa13.33□□□□□ -0.28
RNU6-346P-201ENST00000516288 DMRT2Q9Y5R5 561 aa12.52□□□□□ -0.41
RNU6-346P-201ENST00000516288 CACNB1Q02641 598 aaPredicted RBP12.51□□□□□ -0.41
RNU6-346P-201ENST00000516288 SCAF1Q9H7N4 1312 aaKnown RBP12.43□□□□□ -0.42
RNU6-346P-201ENST00000516288 MAPK8IP2Q13387 824 aaPredicted RBP12.38□□□□□ -0.43
RNU6-346P-201ENST00000516288 DCAF8L1A6NGE4 600 aa12.06□□□□□ -0.48
RNU6-346P-201ENST00000516288 RNF39Q9H2S5 420 aa12□□□□□ -0.49
RNU6-346P-201ENST00000516288 C1QBPQ07021 282 aaKnown RBP11.88□□□□□ -0.51
RNU6-346P-201ENST00000516288 HOXD11P31277 338 aaPredicted RBP11.85□□□□□ -0.51
RNU6-346P-201ENST00000516288 PPP4R3CPQ6ZMV5 832 aa11.66□□□□□ -0.54
RNU6-346P-201ENST00000516288 RNF216Q9NWF9 866 aaPredicted RBP11.65□□□□□ -0.54
RNU6-346P-201ENST00000516288 DNAJC5BQ9UF47 199 aa11.65□□□□□ -0.54
RNU6-346P-201ENST00000516288 CNKSR2Q8WXI2 1034 aa11.62□□□□□ -0.55
RNU6-346P-201ENST00000516288 POTEHQ6S545 545 aa11.44□□□□□ -0.58
RNU6-346P-201ENST00000516288 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.34□□□□□ -0.59
RNU6-346P-201ENST00000516288 NCBP3Q53F19 620 aaKnown RBP11.18□□□□□ -0.62
RNU6-346P-201ENST00000516288 DSG3P32926 999 aa11.04□□□□□ -0.64
RNU6-346P-201ENST00000516288 CAPN15O75808 1086 aa11.03□□□□□ -0.64
RNU6-346P-201ENST00000516288 U3KPZ7 1027 aaPredicted RBP10.93□□□□□ -0.66
RNU6-346P-201ENST00000516288 SPINK5Q9NQ38 1064 aaPredicted RBP10.91□□□□□ -0.66
RNU6-346P-201ENST00000516288 NPM3O75607 178 aaKnown RBP10.84□□□□□ -0.67
RNU6-346P-201ENST00000516288 APLP2Q06481 763 aa10.83□□□□□ -0.68
RNU6-346P-201ENST00000516288 ZNF219Q9P2Y4 722 aaPredicted RBP10.74□□□□□ -0.69
RNU6-346P-201ENST00000516288 TRHP20396 242 aaPredicted RBP10.7□□□□□ -0.7
RNU6-346P-201ENST00000516288 RBM42Q9BTD8 480 aaKnown RBP10.7□□□□□ -0.7
RNU6-346P-201ENST00000516288 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.65□□□□□ -0.7
RNU6-346P-201ENST00000516288 ABCB7O75027 752 aa10.65□□□□□ -0.7
RNU6-346P-201ENST00000516288 HNRNPUL2Q1KMD3 747 aaKnown RBP10.65□□□□□ -0.7
RNU6-346P-201ENST00000516288 CHRDL2Q6WN34 429 aa10.58□□□□□ -0.72
RNU6-346P-201ENST00000516288 SAMD1Q6SPF0 538 aaPredicted RBP10.5□□□□□ -0.73
RNU6-346P-201ENST00000516288 SP7Q8TDD2 431 aaPredicted RBP10.48□□□□□ -0.73
RNU6-346P-201ENST00000516288 SLC4A2P04920 1241 aa10.46□□□□□ -0.73
RNU6-346P-201ENST00000516288 POLA2Q14181 598 aa10.28□□□□□ -0.76
RNU6-346P-201ENST00000516288 AKT1S1Q96B36 256 aa10.28□□□□□ -0.76
RNU6-346P-201ENST00000516288 HAX1O00165 279 aa10.2□□□□□ -0.78
RNU6-346P-201ENST00000516288 PIP4P2Q8N4L2 257 aa10.17□□□□□ -0.78
RNU6-346P-201ENST00000516288 ZBTB12Q9Y330 459 aaPredicted RBP10.17□□□□□ -0.78
RNU6-346P-201ENST00000516288 MYCNP04198 464 aaPredicted RBP10.14□□□□□ -0.79
RNU6-346P-201ENST00000516288 PLSCR2Q9NRY7 297 aa10.14□□□□□ -0.79
RNU6-346P-201ENST00000516288 KCNA4P22459 653 aa10.12□□□□□ -0.79
RNU6-346P-201ENST00000516288 REM2Q8IYK8 340 aaPredicted RBP10.12□□□□□ -0.79
RNU6-346P-201ENST00000516288 FXR2P51116 673 aaKnown RBP eCLIP10.04□□□□□ -0.8
RNU6-346P-201ENST00000516288 PITPNM1O00562 1244 aa9.99□□□□□ -0.81
RNU6-346P-201ENST00000516288 OSCARQ8IYS5 282 aa9.93□□□□□ -0.82
RNU6-346P-201ENST00000516288 EVX2Q03828 476 aa9.87□□□□□ -0.83
RNU6-346P-201ENST00000516288 LHX8Q68G74 356 aa9.83□□□□□ -0.84
RNU6-346P-201ENST00000516288 PRKAR2AP13861 404 aaKnown RBP9.77□□□□□ -0.85
RNU6-346P-201ENST00000516288 ATF5Q9Y2D1 282 aaPredicted RBP9.77□□□□□ -0.85
RNU6-346P-201ENST00000516288 SPDYE2BA6NHP3 402 aa9.75□□□□□ -0.85
RNU6-346P-201ENST00000516288 SPDYE6P0CI01 402 aa9.75□□□□□ -0.85
RNU6-346P-201ENST00000516288 SPDYE2Q495Y8 402 aa9.75□□□□□ -0.85
RNU6-346P-201ENST00000516288 C19orf67A6NJJ6 358 aa9.74□□□□□ -0.85
RNU6-346P-201ENST00000516288 GABBR2O75899 941 aa9.72□□□□□ -0.85
RNU6-346P-201ENST00000516288 SPDYE1Q8NFV5 336 aaPredicted RBP9.72□□□□□ -0.85
RNU6-346P-201ENST00000516288 FOXD4L1Q9NU39 408 aa9.71□□□□□ -0.86
RNU6-346P-201ENST00000516288 CLEC11AQ9Y240 323 aa9.69□□□□□ -0.86
RNU6-346P-201ENST00000516288 FBLN2P98095 1184 aa9.66□□□□□ -0.86
RNU6-346P-201ENST00000516288 CLCN6P51797 869 aa9.59□□□□□ -0.87
RNU6-346P-201ENST00000516288 ATXN8OSP0DMR3 200 aa9.53□□□□□ -0.88
RNU6-346P-201ENST00000516288 SLC4A1APQ9BWU0 796 aaKnown RBP9.53□□□□□ -0.88
RNU6-346P-201ENST00000516288 ZNF692Q9BU19 519 aaPredicted RBP9.52□□□□□ -0.89
RNU6-346P-201ENST00000516288 PRR29P0C7W0 189 aa9.49□□□□□ -0.89
RNU6-346P-201ENST00000516288 SSUH2Q9Y2M2 353 aa9.48□□□□□ -0.89
RNU6-346P-201ENST00000516288 CHADLQ6NUI6 762 aa9.47□□□□□ -0.89
RNU6-346P-201ENST00000516288 DCBLD2Q96PD2 775 aa9.44□□□□□ -0.9
RNU6-346P-201ENST00000516288 POTEIP0CG38 1075 aa9.43□□□□□ -0.9
RNU6-346P-201ENST00000516288 CD44P16070 742 aaKnown RBP9.43□□□□□ -0.9
RNU6-346P-201ENST00000516288 FARP1Q9Y4F1 1045 aaPredicted RBP9.35□□□□□ -0.91
RNU6-346P-201ENST00000516288 PABPN1Q86U42 306 aaKnown RBP eCLIP9.32□□□□□ -0.92
RNU6-346P-201ENST00000516288 MKRN4PQ13434 485 aaPredicted RBP9.31□□□□□ -0.92
RNU6-346P-201ENST00000516288 PCDH10Q9P2E7 1040 aa9.3□□□□□ -0.92
RNU6-346P-201ENST00000516288 POTEMA6NI47 508 aa9.27□□□□□ -0.93
RNU6-346P-201ENST00000516288 ZNF579Q8NAF0 562 aaKnown RBP9.27□□□□□ -0.93
RNU6-346P-201ENST00000516288 POTEGQ6S5H5 508 aa9.23□□□□□ -0.93
RNU6-346P-201ENST00000516288 OTUD5Q96G74 571 aa9.23□□□□□ -0.93
RNU6-346P-201ENST00000516288 ZRANB1Q9UGI0 708 aa9.22□□□□□ -0.93
RNU6-346P-201ENST00000516288 ZBTB22O15209 634 aa9.21□□□□□ -0.94
RNU6-346P-201ENST00000516288 PAK3O75914 559 aaPredicted RBP9.14□□□□□ -0.95
RNU6-346P-201ENST00000516288 GALR2O43603 387 aaPredicted RBP9.12□□□□□ -0.95
RNU6-346P-201ENST00000516288 POTEB2H3BUK9 544 aa9.1□□□□□ -0.95
RNU6-346P-201ENST00000516288 MAMSTRQ6ZN01 415 aa9.09□□□□□ -0.95
RNU6-346P-201ENST00000516288 STAG3Q9UJ98 1225 aa9.09□□□□□ -0.95
RNU6-346P-201ENST00000516288 C7P10643 843 aa9.02□□□□□ -0.97
RNU6-346P-201ENST00000516288 CREBZFQ9NS37 354 aa9.02□□□□□ -0.97
RNU6-346P-201ENST00000516288 SLC39A7Q92504 469 aa9.01□□□□□ -0.97
RNU6-346P-201ENST00000516288 NPM1P06748 294 aaKnown RBP eCLIP9□□□□□ -0.97
RNU6-346P-201ENST00000516288 METRNQ9UJH8 293 aa8.99□□□□□ -0.97
RNU6-346P-201ENST00000516288 SCUBE2Q9NQ36 999 aa8.98□□□□□ -0.97
RNU6-346P-201ENST00000516288 FAM163AQ96GL9 167 aaPredicted RBP8.97□□□□□ -0.97
RNU6-346P-201ENST00000516288 PHF12Q96QT6 1004 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms